Gene Pfl01_3254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPfl01_3254 
Symbol 
ID3713089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas fluorescens Pf0-1 
KingdomBacteria 
Replicon accessionNC_007492 
Strand
Start bp3735144 
End bp3735749 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content63% 
IMG OID 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_348983 
Protein GI77459476 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.49762 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTGCC GAATCATCAT AGCCGACGAT CACCCGCTGT TTCGCGAAGC GCTGCTGCGC 
ACCGTCCAGC GTCTGCTGCC CGAAGCCCTG ATCGAAGAAG CCGGCGACCT GGACACCGTG
CTCGCCCTGC TGCCGGCGGG CGATGAGCCT GACACCTTGA TCCTCGACCT GCGCTTTCCC
GGCCTGACCT GTGTGACCCA GCTCGCTGAA CTGCGCCGGT GTTTGCCGCG AACCACCCTG
ATCGTGGTGT CGATGGTCGA TGACGAAGCA CTGATCGGCG AAGTCATGGC CGCCGGCATC
GATGGATTCA TCGGCAAGAA CATCGCCCCC GACGAAATCG GTCAGGCGAT CCGGGCGATT
CGTGAAGGTG AGGTTCTGGT GAAATTCGCC CCGTCCGGCC TGCTGCCGCT GGACACCTGC
ACCGCCCTCA CCCCGCGTCA GCAAGAGGTG CTGCGGCTGA TTGCCCAAGG CAAGACCAAC
AAGGAAATCG CCCGTGAACT GGATATTTCG CCGTTCACGG TGCGGATTCA TGTGTCGTCG
TTGTTGCGGG TGCTCAACGT GCCGTCGCGG GCTGCGGCGG CAGTCAAGTA TTCCGGAGCG
GGTTAG
 
Protein sequence
MACRIIIADD HPLFREALLR TVQRLLPEAL IEEAGDLDTV LALLPAGDEP DTLILDLRFP 
GLTCVTQLAE LRRCLPRTTL IVVSMVDDEA LIGEVMAAGI DGFIGKNIAP DEIGQAIRAI
REGEVLVKFA PSGLLPLDTC TALTPRQQEV LRLIAQGKTN KEIARELDIS PFTVRIHVSS
LLRVLNVPSR AAAAVKYSGA G