Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pfl01_3254 |
Symbol | |
ID | 3713089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas fluorescens Pf0-1 |
Kingdom | Bacteria |
Replicon accession | NC_007492 |
Strand | + |
Start bp | 3735144 |
End bp | 3735749 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_348983 |
Protein GI | 77459476 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.49762 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTGCC GAATCATCAT AGCCGACGAT CACCCGCTGT TTCGCGAAGC GCTGCTGCGC ACCGTCCAGC GTCTGCTGCC CGAAGCCCTG ATCGAAGAAG CCGGCGACCT GGACACCGTG CTCGCCCTGC TGCCGGCGGG CGATGAGCCT GACACCTTGA TCCTCGACCT GCGCTTTCCC GGCCTGACCT GTGTGACCCA GCTCGCTGAA CTGCGCCGGT GTTTGCCGCG AACCACCCTG ATCGTGGTGT CGATGGTCGA TGACGAAGCA CTGATCGGCG AAGTCATGGC CGCCGGCATC GATGGATTCA TCGGCAAGAA CATCGCCCCC GACGAAATCG GTCAGGCGAT CCGGGCGATT CGTGAAGGTG AGGTTCTGGT GAAATTCGCC CCGTCCGGCC TGCTGCCGCT GGACACCTGC ACCGCCCTCA CCCCGCGTCA GCAAGAGGTG CTGCGGCTGA TTGCCCAAGG CAAGACCAAC AAGGAAATCG CCCGTGAACT GGATATTTCG CCGTTCACGG TGCGGATTCA TGTGTCGTCG TTGTTGCGGG TGCTCAACGT GCCGTCGCGG GCTGCGGCGG CAGTCAAGTA TTCCGGAGCG GGTTAG
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Protein sequence | MACRIIIADD HPLFREALLR TVQRLLPEAL IEEAGDLDTV LALLPAGDEP DTLILDLRFP GLTCVTQLAE LRRCLPRTTL IVVSMVDDEA LIGEVMAAGI DGFIGKNIAP DEIGQAIRAI REGEVLVKFA PSGLLPLDTC TALTPRQQEV LRLIAQGKTN KEIARELDIS PFTVRIHVSS LLRVLNVPSR AAAAVKYSGA G
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