| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3763 |
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| Symbol | |
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| ID | 5541265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4935110 |
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| End bp | 4935775 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640895873 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001433820 |
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| Protein GI | 156743691 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0403461 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATC TCAACCGTGC CATTCGAGTC GTCCTTGCCG ATGATCATGA ACTGGTGCTT
GAGGGATTGC GCGGTCTGCT GGAACGAGAG AGCGATATGA TCGTTGTGGC GACAGCGACC
GACGGCGAGT CGCTCCTGGC GATCATTGAG CGCGAACGAC CGGATGTGGT GGTGATGGAC
CTGGCGATGC CAACACGCGA TGGGCTTTCG TGTCTGCGCG AGATCCGCCG GCGGGGTATG
CCGGTCAAGG TGGTGATACT GACCGCGTTC GGCGACGGCG GGGCGTTGCA GTCGGCGTGG
GAGATGCAGG CGGATGGGTT TGCGCTCAAA ACCGACCCGC CACGCCAGAC GATTGCGACG
ATTCGCAACG TGGCGCACGG GCAGATCGTT TTTCCACGTG TGGTGCGCCA GGCGGCTGAT
GCCACGCAGG CGCACGGGCA GAGCCTCCTG GCGCGGTTGA CGCAGCGCGA ACGCGATGTA
TTACGGTTGC TGGCGGAAGG CATGCCGAAT GCGCAGATCG CCGAACGTCT GGTGGTGCAG
GAAAGTACGG TGAAATATCA CTTGCAGAAC ATCTTCCAGA AACTGGGGGT GACGAATCGC
ACCGAGGCGG CGCAGGTCTA TTACCGCGAA GGCGGGGAAC GTTCGATCTT GAATTCCGAG
CGGTGA
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| Protein sequence | MTDLNRAIRV VLADDHELVL EGLRGLLERE SDMIVVATAT DGESLLAIIE RERPDVVVMD
LAMPTRDGLS CLREIRRRGM PVKVVILTAF GDGGALQSAW EMQADGFALK TDPPRQTIAT
IRNVAHGQIV FPRVVRQAAD ATQAHGQSLL ARLTQRERDV LRLLAEGMPN AQIAERLVVQ
ESTVKYHLQN IFQKLGVTNR TEAAQVYYRE GGERSILNSE R
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