More than 300 homologs were found in PanDaTox collection
for query gene RSP_4133 on replicon NC_007489
Organism: Rhodobacter sphaeroides 2.4.1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007489  RSP_4133  two component LuxR family transcriptional regulator  100 
 
 		 240 aa  490  9.999999999999999e-139  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009430  Rsph17025_4184  hypothetical protein  43.08 
 
 		 207 aa  145  8.000000000000001e-34  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.400045  normal  0.380291 
 
 
-
 
NC_009430  Rsph17025_4179  hypothetical protein  40.21 
 
 		 232 aa  136  2e-31  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.365276 
 
 
-
 
NC_008044  TM1040_0960  two component LuxR family transcriptional regulator  39.29 
 
 		 214 aa  136  3.0000000000000003e-31  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009952  Dshi_1894  putative response regulator receiver protein  34.85 
 
 		 204 aa  114  2.0000000000000002e-24  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.761861  normal  0.0769356 
 
 
-
 
NC_008044  TM1040_0828  two component LuxR family transcriptional regulator  34.69 
 
 		 204 aa  112  4.0000000000000004e-24  Ruegeria sp. TM1040  Bacteria  hitchhiker  0.00513824  normal  0.360671 
 
 
-
 
NC_009428  Rsph17025_1676  two component LuxR family transcriptional regulator  34.41 
 
 		 210 aa  108  9.000000000000001e-23  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.123322  normal  1 
 
 
-
 
NC_007493  RSP_0087  two component transcriptional regulator, LuxR  34.41 
 
 		 210 aa  107  1e-22  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.197031  n/a   
 
 
-
 
NC_009049  Rsph17029_1723  two component LuxR family transcriptional regulator  34.41 
 
 		 240 aa  107  1e-22  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008347  Mmar10_2744  two component LuxR family transcriptional regulator  31.79 
 
 		 201 aa  96.3  4e-19  Maricaulis maris MCS10  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009720  Xaut_0991  two component LuxR family transcriptional regulator  32.34 
 
 		 210 aa  93.2  3e-18  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011071  Smal_3975  two component transcriptional regulator, LuxR family  31.96 
 
 		 221 aa  90.5  2e-17  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0482097  normal  0.237128 
 
 
-
 
NC_007643  Rru_A3229  two component LuxR family transcriptional regulator  33.96 
 
 		 224 aa  90.1  3e-17  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_007509  Bcep18194_C7667  two component LuxR family transcriptional regulator  31 
 
 		 209 aa  87.4  2e-16  Burkholderia sp. 383  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010086  Bmul_3716  two component LuxR family transcriptional regulator  31.5 
 
 		 209 aa  87.4  2e-16  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.576881  normal  0.099275 
 
 
-
 
NC_010505  Mrad2831_4801  two component LuxR family transcriptional regulator  32.8 
 
 		 223 aa  85.9  6e-16  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.136897 
 
 
-
 
NC_009430  Rsph17025_4078  hypothetical protein  35.71 
 
 		 243 aa  85.5  7e-16  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.0439982  normal  0.0668702 
 
 
-
 
NC_009720  Xaut_1450  two component LuxR family transcriptional regulator  32.31 
 
 		 224 aa  85.1  9e-16  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009511  Swit_0694  two component LuxR family transcriptional regulator  28.57 
 
 		 252 aa  84.7  0.000000000000001  Sphingomonas wittichii RW1  Bacteria  normal  0.770061  normal  0.351457 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  33.86 
 
 		 208 aa  83.6  0.000000000000003  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_03258  two-component system regulatory protein  30.93 
 
 		 222 aa  83.2  0.000000000000004  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_007643  Rru_A2232  two component LuxR family transcriptional regulator  30.37 
 
 		 212 aa  81.3  0.00000000000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_2039  two component LuxR family transcriptional regulator  34.56 
 
 		 212 aa  81.6  0.00000000000001  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_7105  two component transcriptional regulator, LuxR family  29.72 
 
 		 241 aa  81.3  0.00000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.106023  normal  0.469545 
 
 
-
 
NC_007489  RSP_4131  two component LuxR family transcriptional regulator  28.88 
 
 		 220 aa  80.5  0.00000000000002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_1110  two component transcriptional regulator, LuxR family  33.75 
 
 		 245 aa  80.5  0.00000000000002  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.686827  n/a   
 
 
-
 
NC_009620  Smed_4344  two component LuxR family transcriptional regulator  32.14 
 
 		 219 aa  80.5  0.00000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  1  normal  0.218307 
 
 
-
 
NC_010511  M446_2139  two component LuxR family transcriptional regulator  33.96 
 
 		 244 aa  79.3  0.00000000000005  Methylobacterium sp. 4-46  Bacteria  normal  0.0202732  normal  0.168937 
 
 
-
 
NC_008254  Meso_0341  two component LuxR family transcriptional regulator  34.19 
 
 		 216 aa  79  0.00000000000007  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  31.6 
 
 		 224 aa  78.6  0.00000000000008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007493  RSP_0511  two component LuxR family transcriptional regulator  29.57 
 
 		 191 aa  78.6  0.00000000000009  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010505  Mrad2831_2408  two component LuxR family transcriptional regulator  28.64 
 
 		 219 aa  78.2  0.0000000000001  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.0426941  normal  0.882432 
 
 
-
 
NC_009831  Ssed_3140  two component LuxR family transcriptional regulator  31.19 
 
 		 220 aa  77.8  0.0000000000001  Shewanella sediminis HAW-EB3  Bacteria  normal  0.803361  normal  0.270175 
 
 
-
 
NC_008782  Ajs_0555  two component LuxR family transcriptional regulator  26.79 
 
 		 232 aa  77.8  0.0000000000001  Acidovorax sp. JS42  Bacteria  normal  0.173401  normal  0.808062 
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  30.62 
 
 		 221 aa  77  0.0000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal  1 
 
 
-
 
NC_007912  Sde_1571  XRE family transcriptional regulator  28.24 
 
 		 227 aa  77  0.0000000000002  Saccharophagus degradans 2-40  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009457  VC0395_A2275  LuxR family transcriptional regulator  30.27 
 
 		 209 aa  77.4  0.0000000000002  Vibrio cholerae O395  Bacteria  normal  0.314776  n/a   
 
 
-
 
NC_009485  BBta_0852  two component LuxR family transcriptional regulator  31.79 
 
 		 224 aa  77.4  0.0000000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.852842  normal  0.596615 
 
 
-
 
NC_012791  Vapar_0555  two component transcriptional regulator, LuxR family  28.8 
 
 		 227 aa  75.9  0.0000000000005  Variovorax paradoxus S110  Bacteria  normal  0.401942  n/a   
 
 
-
 
NC_009049  Rsph17029_2163  two component LuxR family transcriptional regulator  28.49 
 
 		 191 aa  75.9  0.0000000000005  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.394692  normal  0.0704049 
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  29.21 
 
 		 221 aa  75.5  0.0000000000007  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_013093  Amir_4433  two component transcriptional regulator, LuxR family  30.99 
 
 		 215 aa  75.1  0.0000000000009  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  33.11 
 
 		 231 aa  75.1  0.0000000000009  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_4737  two component transcriptional regulator, LuxR family  27.88 
 
 		 241 aa  75.1  0.0000000000009  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.0133592 
 
 
-
 
NC_009092  Shew_2614  two component LuxR family transcriptional regulator  28.08 
 
 		 222 aa  75.1  0.000000000001  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  29.21 
 
 		 221 aa  74.3  0.000000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_3170  two component transcriptional regulator, LuxR family protein  28.36 
 
 		 227 aa  74.7  0.000000000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009719  Plav_1690  two component LuxR family transcriptional regulator  33.07 
 
 		 215 aa  74.7  0.000000000001  Parvibaculum lavamentivorans DS-1  Bacteria  normal  1  normal  0.104312 
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  30.86 
 
 		 225 aa  74.7  0.000000000001  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_008700  Sama_0522  response regulator receiver protein  28.36 
 
 		 223 aa  74.7  0.000000000001  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  0.211294 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  29.95 
 
 		 214 aa  73.6  0.000000000002  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  29.56 
 
 		 209 aa  73.6  0.000000000002  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008254  Meso_0596  two component LuxR family transcriptional regulator  32.46 
 
 		 228 aa  74.3  0.000000000002  Chelativorans sp. BNC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_2171  two component LuxR family transcriptional regulator  28.77 
 
 		 218 aa  74.3  0.000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.0762379  n/a   
 
 
-
 
NC_014213  Mesil_3486  hypothetical protein  30.05 
 
 		 206 aa  74.3  0.000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009668  Oant_3368  two component LuxR family transcriptional regulator  33.33 
 
 		 258 aa  73.2  0.000000000003  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0298943  n/a   
 
 
-
 
NC_010513  Xfasm12_0290  response regulator receiver protein  37.4 
 
 		 210 aa  73.2  0.000000000003  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_009636  Smed_0164  two component LuxR family transcriptional regulator  37.5 
 
 		 215 aa  73.6  0.000000000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.523755  normal  1 
 
 
-
 
NC_013161  Cyan8802_1954  two component transcriptional regulator, LuxR family  26.51 
 
 		 221 aa  73.2  0.000000000003  Cyanothece sp. PCC 8802  Bacteria  normal  1  normal  0.682063 
 
 
-
 
NC_011726  PCC8801_1927  two component transcriptional regulator, LuxR family  26.51 
 
 		 221 aa  73.2  0.000000000003  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009428  Rsph17025_1932  two component LuxR family transcriptional regulator  30.61 
 
 		 236 aa  73.6  0.000000000003  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003910  CPS_0179  LuxR family DNA-binding response regulator  33.87 
 
 		 219 aa  72.8  0.000000000004  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_009621  Smed_5114  two component LuxR family transcriptional regulator  30.81 
 
 		 230 aa  72.8  0.000000000004  Sinorhizobium medicae WSM419  Bacteria  normal  1  decreased coverage  0.00554548 
 
 
-
 
NC_008148  Rxyl_1953  two component LuxR family transcriptional regulator  33.83 
 
 		 208 aa  72.8  0.000000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.160868  n/a   
 
 
-
 
NC_009997  Sbal195_1319  two component LuxR family transcriptional regulator  27.27 
 
 		 216 aa  72.8  0.000000000004  Shewanella baltica OS195  Bacteria  normal  0.0542522  decreased coverage  0.000972679 
 
 
-
 
NC_008740  Maqu_2218  two component LuxR family transcriptional regulator  28.65 
 
 		 221 aa  73.2  0.000000000004  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_009092  Shew_3506  two component LuxR family transcriptional regulator  29.9 
 
 		 198 aa  72.8  0.000000000005  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  30.15 
 
 		 214 aa  72.8  0.000000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal  1 
 
 
-
 
NC_003910  CPS_3420  LuxR family DNA-binding response regulator  30.54 
 
 		 216 aa  72.4  0.000000000006  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_009620  Smed_4826  two component LuxR family transcriptional regulator  36.51 
 
 		 267 aa  72.4  0.000000000006  Sinorhizobium medicae WSM419  Bacteria  normal  0.847801  normal  0.0520322 
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  32.16 
 
 		 230 aa  72  0.000000000008  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010577  XfasM23_0261  two component LuxR family transcriptional regulator  36.59 
 
 		 210 aa  71.6  0.000000000009  Xylella fastidiosa M23  Bacteria  normal  0.574059  n/a   
 
 
-
 
NC_007404  Tbd_2570  two component LuxR family transcriptional regulator  29.7 
 
 		 224 aa  71.6  0.000000000009  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.282998  normal  0.225314 
 
 
-
 
NC_007493  RSP_2591  two component LuxR family transcriptional regulator  29.93 
 
 		 235 aa  71.6  0.000000000009  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.211381  n/a   
 
 
-
 
NC_002947  PP_1635  LuxR family two component transcriptional regulator  29.55 
 
 		 216 aa  71.2  0.00000000001  Pseudomonas putida KT2440  Bacteria  normal  1  normal  0.0994806 
 
 
-
 
NC_011899  Hore_21820  two component transcriptional regulator, LuxR family  29 
 
 		 211 aa  71.2  0.00000000001  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_004311  BRA0415  LuxR family transcriptional regulator  33.33 
 
 		 255 aa  71.2  0.00000000001  Brucella suis 1330  Bacteria  normal  0.272996  n/a   
 
 
-
 
NC_009512  Pput_4082  two component LuxR family transcriptional regulator  29.55 
 
 		 216 aa  71.2  0.00000000001  Pseudomonas putida F1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  27.27 
 
 		 221 aa  71.6  0.00000000001  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_007404  Tbd_2464  two component LuxR family transcriptional regulator  29.7 
 
 		 221 aa  71.6  0.00000000001  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009654  Mmwyl1_3005  two component LuxR family transcriptional regulator  31.51 
 
 		 217 aa  71.6  0.00000000001  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00815247  normal  1 
 
 
-
 
NC_011894  Mnod_3782  two component transcriptional regulator, LuxR family  35.57 
 
 		 223 aa  71.2  0.00000000001  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_010322  PputGB1_1237  two component LuxR family transcriptional regulator  29.55 
 
 		 216 aa  71.2  0.00000000001  Pseudomonas putida GB-1  Bacteria  normal  1  hitchhiker  0.00000000317123 
 
 
-
 
NC_013947  Snas_2557  two component transcriptional regulator, LuxR family  31.71 
 
 		 224 aa  71.2  0.00000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.231398  normal  0.0978001 
 
 
-
 
NC_010501  PputW619_4024  two component LuxR family transcriptional regulator  28.98 
 
 		 216 aa  71.2  0.00000000001  Pseudomonas putida W619  Bacteria  normal  1  hitchhiker  0.00000136895 
 
 
-
 
NC_009504  BOV_A0358  LuxR family transcriptional regulator  33.33 
 
 		 255 aa  71.2  0.00000000001  Brucella ovis ATCC 25840  Bacteria  normal  1  n/a   
 
 
-
 
NC_009439  Pmen_1943  two component LuxR family transcriptional regulator  27.36 
 
 		 221 aa  70.5  0.00000000002  Pseudomonas mendocina ymp  Bacteria  normal  0.550145  normal  1 
 
 
-
 
NC_010322  PputGB1_3138  two component LuxR family transcriptional regulator  28.23 
 
 		 221 aa  70.9  0.00000000002  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.892266 
 
 
-
 
NC_007298  Daro_0264  two component LuxR family transcriptional regulator  26.79 
 
 		 221 aa  70.5  0.00000000002  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  26.79 
 
 		 217 aa  70.9  0.00000000002  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_007492  Pfl01_1182  two component LuxR family transcriptional regulator  29.55 
 
 		 216 aa  70.9  0.00000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  0.192356 
 
 
-
 
NC_010172  Mext_4220  response regulator receiver  27.8 
 
 		 244 aa  70.5  0.00000000002  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.89842 
 
 
-
 
NC_013093  Amir_7009  two component transcriptional regulator, LuxR family  33.75 
 
 		 218 aa  70.9  0.00000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0896567  n/a   
 
 
-
 
NC_011071  Smal_2061  two component transcriptional regulator, LuxR family  28.41 
 
 		 224 aa  70.9  0.00000000002  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.737796  normal  1 
 
 
-
 
NC_011757  Mchl_4590  two component transcriptional regulator, LuxR family  27.8 
 
 		 244 aa  70.5  0.00000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.590508  normal  0.147521 
 
 
-
 
NC_008228  Patl_1981  two component LuxR family transcriptional regulator  36.51 
 
 		 213 aa  70.5  0.00000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.607794  n/a   
 
 
-
 
NC_011666  Msil_2341  two component transcriptional regulator, LuxR family  31.47 
 
 		 209 aa  70.9  0.00000000002  Methylocella silvestris BL2  Bacteria  n/a    normal  0.193906 
 
 
-
 
NC_011884  Cyan7425_3249  two component transcriptional regulator, LuxR family  27.96 
 
 		 211 aa  70.9  0.00000000002  Cyanothece sp. PCC 7425  Bacteria  normal  0.414819  normal  0.558116 
 
 
-
 
NC_008345  Sfri_1828  two component transcriptional regulator, LuxR family protein  35.2 
 
 		 216 aa  70.9  0.00000000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_012850  Rleg_1495  two component transcriptional regulator, LuxR family  29.94 
 
 		 207 aa  70.5  0.00000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.194449  normal  0.395611 
 
 
-
 
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