| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_8454 |
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| Symbol | |
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| ID | 8339834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 9789062 |
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| End bp | 9789808 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644961541 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003119118 |
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| Protein GI | 256397554 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0223663 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000372445 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCGCAA GGATCGTGCT GTGTGATGAC CACACTTTGC TCACCGAGTC GCTGGCGGCG
TCGCTGGCGG CGAAGGGGTA TCAGGTGGAG GCGGTGACGT CGACGCCGGC GCAGGGGTTG
GCTGCGGTGG CTTCGTTGGA TCCGGACATC CTCATGCTTG ATGTGCACTT TCCGATGACG
GTCTCGGCGC GGGCTGCCGC CTCGCCGCTG GCCACGGCCG GGGAGCAGGC GTTTCCGGTG
TCGCGGCCTA ACAGCCGGAT GGTGACGGCG GGGTTGGAGC TGGCGCGGGC GGTGCTGGAG
CGGCATCCTC GGACCAAGGT GTTGATGGTT TCGGCGACGG ATGATCCGGC GATCGTCAGC
GCCGCCTTGG ATCTCGGGGT GTCGGGGTTC ACGCGCAAGG ACCAGCGGAT CGACGGGATC
GTGCAGATCC TGGAGCGGGT CGCGGCCGGG GAGGTCGCGG TGGATCCGGA GTTGCTGCGG
GCGGCGGTGC GGCATCTGAA GGCGCCGGAC GTCGACCAGG CCGAGCGCAC CCTGCGCTAC
CTCACCCCGC GCGAGCGCGA GGTGCTGCGG CGGATCGTCG AGGGCGAGTC GACCAAGCAG
ATCGCGCGCG CCATGGACAT CGCGCAGTCC ACGGCCCGGA CGCATGTGCA GAACGTGCTG
GTCAAGCTGG GTGCGCACTC CCGCGTCGAG GCCTCGGCGA TCGTCGCTCG GGTCGGCGCG
GTGGACCGCC TCGGTGCTTC GCAGTAA
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| Protein sequence | MPARIVLCDD HTLLTESLAA SLAAKGYQVE AVTSTPAQGL AAVASLDPDI LMLDVHFPMT
VSARAAASPL ATAGEQAFPV SRPNSRMVTA GLELARAVLE RHPRTKVLMV SATDDPAIVS
AALDLGVSGF TRKDQRIDGI VQILERVAAG EVAVDPELLR AAVRHLKAPD VDQAERTLRY
LTPREREVLR RIVEGESTKQ IARAMDIAQS TARTHVQNVL VKLGAHSRVE ASAIVARVGA
VDRLGASQ
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