More than 300 homologs were found in PanDaTox collection
for query gene Caci_8454 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013131  Caci_8454  two component transcriptional regulator, LuxR family  100 
 
 		 248 aa  487  1e-137  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0223663  hitchhiker  0.00000372445 
 
 
-
 
NC_013235  Namu_2014  two component transcriptional regulator, LuxR family  32.34 
 
 		 212 aa  118  9.999999999999999e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  0.172206  hitchhiker  0.00394331 
 
 
-
 
NC_007298  Daro_0834  LuxR response regulator receiver  29.69 
 
 		 221 aa  107  1e-22  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.0179337 
 
 
-
 
NC_008825  Mpe_A1686  two component LuxR family transcriptional regulator  34.62 
 
 		 240 aa  104  2e-21  Methylibium petroleiphilum PM1  Bacteria  normal  0.173725  normal  0.554277 
 
 
-
 
NC_008340  Mlg_1669  two component LuxR family transcriptional regulator  29.96 
 
 		 221 aa  103  3e-21  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008789  Hhal_1965  two component LuxR family transcriptional regulator  31.97 
 
 		 217 aa  102  4e-21  Halorhodospira halophila SL1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_2630  two component transcriptional regulator, LuxR family  29.34 
 
 		 243 aa  102  6e-21  Thauera sp. MZ1T  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_3105  two component transcriptional regulator, LuxR family  28.81 
 
 		 223 aa  101  1e-20  Geobacter sp. M21  Bacteria  n/a    normal  1 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  27.62 
 
 		 224 aa  99.8  3e-20  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_014151  Cfla_2842  two component transcriptional regulator, LuxR family  33.47 
 
 		 226 aa  99  6e-20  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.622781  decreased coverage  0.00305681 
 
 
-
 
NC_010002  Daci_1106  two component LuxR family transcriptional regulator  32.08 
 
 		 223 aa  98.6  8e-20  Delftia acidovorans SPH-1  Bacteria  normal  0.584765  normal  1 
 
 
-
 
NC_009338  Mflv_5014  two component LuxR family transcriptional regulator  30.83 
 
 		 209 aa  98.2  1e-19  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.103708  normal  0.29037 
 
 
-
 
NC_011992  Dtpsy_0424  two component transcriptional regulator, LuxR family  32.35 
 
 		 223 aa  97.1  3e-19  Acidovorax ebreus TPSY  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_3238  regulatory protein LuxR  32.19 
 
 		 228 aa  97.1  3e-19  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_1358  two component LuxR family transcriptional regulator  31.95 
 
 		 220 aa  97.1  3e-19  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.110964  normal  1 
 
 
-
 
NC_008782  Ajs_0433  two component LuxR family transcriptional regulator  32.35 
 
 		 223 aa  97.1  3e-19  Acidovorax sp. JS42  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007204  Psyc_0602  nitrate/nitrite response regulator  28.45 
 
 		 219 aa  96.3  4e-19  Psychrobacter arcticus 273-4  Bacteria  normal  0.790372  normal  1 
 
 
-
 
NC_013526  Tter_2548  two component transcriptional regulator, LuxR family  28.63 
 
 		 218 aa  96.3  4e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_1708  two component LuxR family transcriptional regulator  29.17 
 
 		 221 aa  95.9  5e-19  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  normal  0.685529 
 
 
-
 
NC_013159  Svir_02200  two component transcriptional regulator, LuxR family  31.74 
 
 		 208 aa  95.5  7e-19  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_2343  two component LuxR family transcriptional regulator  28.12 
 
 		 211 aa  95.1  8e-19  Dechloromonas aromatica RCB  Bacteria  normal  0.999882  normal  0.0841394 
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  28.45 
 
 		 219 aa  95.5  8e-19  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  28.45 
 
 		 219 aa  95.1  9e-19  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  25.9 
 
 		 224 aa  94.4  1e-18  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008740  Maqu_3089  two component LuxR family transcriptional regulator  27.5 
 
 		 219 aa  94  2e-18  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_007404  Tbd_2464  two component LuxR family transcriptional regulator  32.76 
 
 		 221 aa  93.6  3e-18  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012857  Rpic12D_3598  two component transcriptional regulator, LuxR family  28.81 
 
 		 218 aa  93.6  3e-18  Ralstonia pickettii 12D  Bacteria  normal  0.329097  normal  0.731815 
 
 
-
 
NC_010678  Rpic_4675  two component transcriptional regulator, LuxR family  28.81 
 
 		 218 aa  93.6  3e-18  Ralstonia pickettii 12J  Bacteria  normal  0.760252  normal  1 
 
 
-
 
NC_003296  RSp0980  nitrate/nitrite response regulator transcription regulator protein  29.58 
 
 		 222 aa  92.8  5e-18  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013124  Afer_1446  two component transcriptional regulator, LuxR family  27.54 
 
 		 223 aa  92.8  5e-18  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_0775  LuxR family two component transcriptional regulator  28.4 
 
 		 234 aa  92.8  5e-18  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.336237 
 
 
-
 
NC_013525  Tter_0641  two component transcriptional regulator, LuxR family  25.74 
 
 		 1648 aa  92.4  5e-18  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  27.92 
 
 		 227 aa  92.8  5e-18  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_1543  two component transcriptional regulator, LuxR family  31.12 
 
 		 221 aa  92  8e-18  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_1417  response regulator receiver protein  26.14 
 
 		 234 aa  92  8e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0224272 
 
 
-
 
NC_013205  Aaci_0516  two component transcriptional regulator, LuxR family  27.2 
 
 		 231 aa  91.7  9e-18  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_007948  Bpro_4598  two component LuxR family transcriptional regulator  29.41 
 
 		 236 aa  91.3  1e-17  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  25.96 
 
 		 208 aa  91.3  1e-17  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  27.16 
 
 		 222 aa  91.7  1e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_012791  Vapar_3992  two component transcriptional regulator, LuxR family  32.03 
 
 		 214 aa  90.9  2e-17  Variovorax paradoxus S110  Bacteria  normal  0.82671  n/a   
 
 
-
 
NC_013525  Tter_1109  two component transcriptional regulator, LuxR family  25.52 
 
 		 218 aa  90.9  2e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_1355  two component LuxR family transcriptional regulator  28.03 
 
 		 230 aa  90.9  2e-17  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014158  Tpau_1874  two component transcriptional regulator, LuxR family  32.64 
 
 		 213 aa  90.1  3e-17  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.635222  n/a   
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  30.08 
 
 		 230 aa  90.1  3e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.455968 
 
 
-
 
NC_004310  BR0315  LuxR family DNA-binding response regulator  36.81 
 
 		 213 aa  89.7  4e-17  Brucella suis 1330  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_3043  two component transcriptional regulator, LuxR family  25.4 
 
 		 225 aa  89.7  4e-17  Geobacillus sp. WCH70  Bacteria  decreased coverage  0.0000000652561  n/a   
 
 
-
 
NC_002939  GSU3229  LuxR family DNA-binding response regulator  25 
 
 		 229 aa  89.4  5e-17  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_009077  Mjls_1083  two component LuxR family transcriptional regulator  32 
 
 		 219 aa  89.4  5e-17  Mycobacterium sp. JLS  Bacteria  normal  0.605869  normal  1 
 
 
-
 
NC_008146  Mmcs_1056  two component LuxR family transcriptional regulator  32 
 
 		 219 aa  89.4  5e-17  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008705  Mkms_1072  two component LuxR family transcriptional regulator  32 
 
 		 219 aa  89.4  5e-17  Mycobacterium sp. KMS  Bacteria  normal  0.562029  normal  0.0679961 
 
 
-
 
NC_009524  PsycPRwf_0663  two component LuxR family transcriptional regulator  27.64 
 
 		 219 aa  89  7e-17  Psychrobacter sp. PRwf-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_9329  response regulator receiver protein  32.52 
 
 		 217 aa  88.6  7e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  27.16 
 
 		 232 aa  89  7e-17  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_010511  M446_0625  two component LuxR family transcriptional regulator  32.51 
 
 		 221 aa  88.6  9e-17  Methylobacterium sp. 4-46  Bacteria  normal  0.793996  hitchhiker  0.00440064 
 
 
-
 
NC_002967  TDE0149  DNA-binding response regulator  24.89 
 
 		 201 aa  88.2  1e-16  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  29.34 
 
 		 225 aa  88.2  1e-16  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.114252 
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  26.67 
 
 		 220 aa  88.2  1e-16  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_008148  Rxyl_0094  two component LuxR family transcriptional regulator  31.5 
 
 		 222 aa  87.8  1e-16  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_2656  two component transcriptional regulator, LuxR family  29.6 
 
 		 226 aa  87.8  1e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.161573  normal  1 
 
 
-
 
NC_009953  Sare_4214  two component LuxR family transcriptional regulator  30.43 
 
 		 228 aa  87.4  2e-16  Salinispora arenicola CNS-205  Bacteria  normal  0.0601429  normal  0.0532868 
 
 
-
 
NC_007348  Reut_B5066  LuxR response regulator receiver  27.35 
 
 		 217 aa  87.8  2e-16  Ralstonia eutropha JMP134  Bacteria  normal  0.822528  n/a   
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  27.2 
 
 		 227 aa  87  2e-16  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009439  Pmen_4183  two component LuxR family transcriptional regulator  29.66 
 
 		 220 aa  87.8  2e-16  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011883  Ddes_0810  two component transcriptional regulator, LuxR family  29.96 
 
 		 223 aa  87.8  2e-16  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.935684  n/a   
 
 
-
 
NC_011884  Cyan7425_1401  two component transcriptional regulator, LuxR family  27.92 
 
 		 217 aa  87.4  2e-16  Cyanothece sp. PCC 7425  Bacteria  normal  1  normal  0.482316 
 
 
-
 
NC_009674  Bcer98_0214  two component LuxR family transcriptional regulator  28.51 
 
 		 220 aa  87.4  2e-16  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  31.14 
 
 		 214 aa  86.7  3e-16  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_0508  response regulator receiver protein  29.96 
 
 		 212 aa  86.7  3e-16  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009505  BOV_0331  LuxR family DNA-binding response regulator  36.11 
 
 		 213 aa  86.7  3e-16  Brucella ovis ATCC 25840  Bacteria  normal  0.338839  n/a   
 
 
-
 
NC_013093  Amir_5375  two component transcriptional regulator, LuxR family  29.6 
 
 		 218 aa  86.3  4e-16  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_1651  two component transcriptional regulator, LuxR family  31.43 
 
 		 218 aa  86.3  4e-16  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000163278  n/a   
 
 
-
 
NC_008340  Mlg_1006  two component LuxR family transcriptional regulator  36.03 
 
 		 219 aa  86.3  4e-16  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_3459  two component LuxR family transcriptional regulator  28.15 
 
 		 223 aa  86.3  4e-16  Shewanella sp. ANA-3  Bacteria  normal  0.306063  normal  0.532773 
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  24.58 
 
 		 213 aa  86.7  4e-16  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_011899  Hore_19700  two component transcriptional regulator, LuxR family  24.48 
 
 		 209 aa  86.7  4e-16  Halothermothrix orenii H 168  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  26.56 
 
 		 253 aa  85.9  5e-16  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_008322  Shewmr7_0664  two component LuxR family transcriptional regulator  27.73 
 
 		 223 aa  86.3  5e-16  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.358413 
 
 
-
 
NC_008699  Noca_1438  response regulator receiver  27.71 
 
 		 213 aa  86.3  5e-16  Nocardioides sp. JS614  Bacteria  normal  0.494689  n/a   
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  30.04 
 
 		 221 aa  85.9  6e-16  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_013530  Xcel_0239  two component transcriptional regulator, LuxR family  31.69 
 
 		 230 aa  85.5  6e-16  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_1198  two component transcriptional regulator, LuxR family  31.97 
 
 		 225 aa  85.9  6e-16  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.109916  normal  0.0247339 
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  29.03 
 
 		 226 aa  85.5  7e-16  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_1532  two component transcriptional regulator, LuxR family  28.27 
 
 		 220 aa  85.5  7e-16  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0114765  n/a   
 
 
-
 
NC_014158  Tpau_2872  two component transcriptional regulator, LuxR family  29.67 
 
 		 218 aa  85.5  7e-16  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_011831  Cagg_1346  two component transcriptional regulator, LuxR family  26.27 
 
 		 236 aa  85.5  8e-16  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.361751  hitchhiker  0.00000337078 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  25.31 
 
 		 215 aa  85.5  8e-16  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_5840  two component LuxR family transcriptional regulator  26.56 
 
 		 237 aa  85.5  8e-16  Frankia sp. EAN1pec  Bacteria  normal  0.0206065  normal  0.380036 
 
 
-
 
NC_004578  PSPTO_2130  DNA-binding response regulator, LuxR family  29.36 
 
 		 222 aa  85.1  9e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_014212  Mesil_2848  two component transcriptional regulator, LuxR family  24.69 
 
 		 212 aa  85.1  9e-16  Meiothermus silvanus DSM 9946  Bacteria  normal  0.857037  normal  0.944506 
 
 
-
 
NC_014148  Plim_2876  response regulator receiver  26.86 
 
 		 284 aa  85.1  0.000000000000001  Planctomyces limnophilus DSM 3776  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_4738  two component transcriptional regulator, LuxR family  28.94 
 
 		 233 aa  84.7  0.000000000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007973  Rmet_2087  two component LuxR family transcriptional regulator  29.49 
 
 		 217 aa  85.1  0.000000000000001  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.332036 
 
 
-
 
NC_008321  Shewmr4_3283  two component LuxR family transcriptional regulator  27.73 
 
 		 223 aa  84.7  0.000000000000001  Shewanella sp. MR-4  Bacteria  normal  1  normal  0.335218 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  23.77 
 
 		 215 aa  84  0.000000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  25.31 
 
 		 215 aa  84.3  0.000000000000002  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_013739  Cwoe_5557  two component transcriptional regulator, LuxR family  29.83 
 
 		 223 aa  84  0.000000000000002  Conexibacter woesei DSM 14684  Bacteria  normal  0.496641  normal  1 
 
 
-
 
NC_007005  Psyr_1940  LuxR response regulator receiver  28.7 
 
 		 222 aa  84  0.000000000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.95717  normal  1 
 
 
-
 
NC_007519  Dde_0977  two component LuxR family transcriptional regulator  26.23 
 
 		 223 aa  84  0.000000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.00800748  n/a   
 
 
-
 
NC_013757  Gobs_3437  two component transcriptional regulator, LuxR family  30 
 
 		 248 aa  84  0.000000000000002  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.39912  n/a   
 
 
-
 
NC_009523  RoseRS_3278  two component LuxR family transcriptional regulator  28.33 
 
 		 214 aa  84  0.000000000000002  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.749326 
 
 
-
 
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