More than 300 homologs were found in PanDaTox collection
for query gene RoseRS_3278 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009523  RoseRS_3278  two component LuxR family transcriptional regulator  100 
 
 		 214 aa  432  1e-120  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.749326 
 
 
-
 
NC_009767  Rcas_3763  two component LuxR family transcriptional regulator  93.93 
 
 		 221 aa  407  1e-113  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.0403461 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  38.53 
 
 		 216 aa  146  2.0000000000000003e-34  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  39.9 
 
 		 213 aa  145  6e-34  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_011898  Ccel_1863  two component transcriptional regulator, LuxR family  37.33 
 
 		 216 aa  144  7.0000000000000006e-34  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.00000548978  n/a   
 
 
-
 
NC_013947  Snas_3745  two component transcriptional regulator, LuxR family  41.29 
 
 		 235 aa  144  9e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.627677  normal  0.255424 
 
 
-
 
NC_013947  Snas_2469  two component transcriptional regulator, LuxR family  42.23 
 
 		 214 aa  144  1e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.126163  normal  1 
 
 
-
 
NC_013131  Caci_7658  two component transcriptional regulator, LuxR family  42.79 
 
 		 219 aa  144  1e-33  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_0523  two component transcriptional regulator, LuxR family  41.47 
 
 		 230 aa  144  1e-33  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_1846  LuxR family two component transcriptional regulator  43.52 
 
 		 226 aa  144  1e-33  Thermobispora bispora DSM 43833  Bacteria  normal  0.699471  normal  1 
 
 
-
 
NC_013739  Cwoe_1616  two component transcriptional regulator, LuxR family  40.83 
 
 		 229 aa  142  4e-33  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013522  Taci_0801  two component transcriptional regulator, LuxR family  35.41 
 
 		 227 aa  142  5e-33  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_008699  Noca_2635  response regulator receiver  40.65 
 
 		 207 aa  140  9.999999999999999e-33  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_5304  response regulator receiver protein  40.76 
 
 		 220 aa  140  9.999999999999999e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128918  normal  1 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  40.57 
 
 		 226 aa  140  1.9999999999999998e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_008346  Swol_0186  response regulator receiver protein  39.9 
 
 		 213 aa  139  3e-32  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  decreased coverage  0.00000327076  n/a   
 
 
-
 
NC_009921  Franean1_6351  two component LuxR family transcriptional regulator  39.52 
 
 		 244 aa  139  3e-32  Frankia sp. EAN1pec  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_2302  two component transcriptional regulator, LuxR family  41.1 
 
 		 226 aa  138  4.999999999999999e-32  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0191252  n/a   
 
 
-
 
NC_013235  Namu_5018  two component transcriptional regulator, LuxR family  40.7 
 
 		 209 aa  138  7e-32  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008148  Rxyl_2809  two component LuxR family transcriptional regulator  38.5 
 
 		 219 aa  138  7e-32  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS2109  LuxR family DNA-binding response regulator  37.02 
 
 		 209 aa  138  7.999999999999999e-32  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_2048  response regulator  37.02 
 
 		 209 aa  138  7.999999999999999e-32  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.102554  n/a   
 
 
-
 
NC_006274  BCZK2046  response regulator  37.02 
 
 		 209 aa  138  7.999999999999999e-32  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_2265  LuxR family DNA-binding response regulator  37.02 
 
 		 209 aa  138  7.999999999999999e-32  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.201191  n/a   
 
 
-
 
NC_011773  BCAH820_2290  DNA-binding response regulator, LuxR family  37.02 
 
 		 209 aa  138  7.999999999999999e-32  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000736213 
 
 
-
 
NC_014165  Tbis_0228  LuxR family two component transcriptional regulator  41.75 
 
 		 206 aa  137  8.999999999999999e-32  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007413  Ava_2028  two component LuxR family transcriptional regulator  39.71 
 
 		 219 aa  137  1e-31  Anabaena variabilis ATCC 29413  Bacteria  normal  0.515359  normal  1 
 
 
-
 
NC_011658  BCAH187_A2375  DNA-binding response regulator, LuxR family  37.02 
 
 		 209 aa  137  1e-31  Bacillus cereus AH187  Bacteria  normal  0.248491  n/a   
 
 
-
 
NC_013093  Amir_0601  two component transcriptional regulator, LuxR family  39.81 
 
 		 215 aa  137  1e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_3331  response regulator receiver protein  41.9 
 
 		 227 aa  136  2e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.832029  normal  0.250763 
 
 
-
 
NC_013595  Sros_5905  response regulator receiver protein  41.94 
 
 		 227 aa  135  3.0000000000000003e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0252894  normal  0.145246 
 
 
-
 
NC_013159  Svir_00210  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  39.19 
 
 		 221 aa  135  4e-31  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.133182 
 
 
-
 
NC_013131  Caci_8412  two component transcriptional regulator, LuxR family  40.09 
 
 		 239 aa  135  5e-31  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_2943  two component LuxR family transcriptional regulator  40.3 
 
 		 215 aa  135  5e-31  Nocardioides sp. JS614  Bacteria  normal  1  n/a   
 
 
-
 
NC_009921  Franean1_5512  two component LuxR family transcriptional regulator  38.03 
 
 		 250 aa  135  5e-31  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.631776 
 
 
-
 
NC_013595  Sros_0508  response regulator receiver protein  39.23 
 
 		 212 aa  135  6.0000000000000005e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_4857  two component transcriptional regulator, LuxR family  39.21 
 
 		 234 aa  134  8e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.243741 
 
 
-
 
NC_009487  SaurJH9_1902  two component LuxR family transcriptional regulator  38.38 
 
 		 207 aa  134  8e-31  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000041006  n/a   
 
 
-
 
NC_009632  SaurJH1_1936  response regulator receiver  38.38 
 
 		 207 aa  134  8e-31  Staphylococcus aureus subsp. aureus JH1  Bacteria  unclonable  0.000000150819  n/a   
 
 
-
 
NC_008009  Acid345_0268  two component LuxR family transcriptional regulator  40.67 
 
 		 217 aa  134  9.999999999999999e-31  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.289536  normal  1 
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  38.68 
 
 		 220 aa  133  1.9999999999999998e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  39.15 
 
 		 215 aa  133  1.9999999999999998e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_0236  two component transcriptional regulator, LuxR family  36.92 
 
 		 224 aa  133  1.9999999999999998e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014210  Ndas_4254  two component transcriptional regulator, LuxR family  37.27 
 
 		 225 aa  133  1.9999999999999998e-30  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.867992  normal  0.287586 
 
 
-
 
NC_008148  Rxyl_2629  two component LuxR family transcriptional regulator  37.33 
 
 		 232 aa  133  1.9999999999999998e-30  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.312922  n/a   
 
 
-
 
NC_013595  Sros_7211  response regulator receiver protein  40.19 
 
 		 215 aa  133  1.9999999999999998e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0769384 
 
 
-
 
NC_008699  Noca_1020  response regulator receiver  37.8 
 
 		 218 aa  133  1.9999999999999998e-30  Nocardioides sp. JS614  Bacteria  normal  0.648692  n/a   
 
 
-
 
NC_009380  Strop_1796  response regulator receiver  41.4 
 
 		 230 aa  133  1.9999999999999998e-30  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  37.5 
 
 		 224 aa  133  1.9999999999999998e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_009523  RoseRS_3421  two component LuxR family transcriptional regulator  39.42 
 
 		 223 aa  133  1.9999999999999998e-30  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  0.0556432 
 
 
-
 
NC_009664  Krad_4263  two component transcriptional regulator, LuxR family  37.04 
 
 		 230 aa  133  1.9999999999999998e-30  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.455968 
 
 
-
 
NC_010184  BcerKBAB4_2087  two component LuxR family transcriptional regulator  36.79 
 
 		 213 aa  133  1.9999999999999998e-30  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0358431  n/a   
 
 
-
 
NC_013159  Svir_26840  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  39.53 
 
 		 239 aa  132  3e-30  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.274056  normal  0.228776 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  40.57 
 
 		 221 aa  132  3e-30  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_013521  Sked_29940  two component transcriptional regulator, LuxR family  41.15 
 
 		 234 aa  132  3.9999999999999996e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.683883 
 
 
-
 
NC_013947  Snas_1960  two component transcriptional regulator, LuxR family  39.71 
 
 		 216 aa  132  5e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_5499  response regulator receiver protein  38.35 
 
 		 213 aa  132  5e-30  Streptosporangium roseum DSM 43021  Bacteria  decreased coverage  0.00659712  normal  0.108677 
 
 
-
 
NC_013522  Taci_1568  two component transcriptional regulator, LuxR family  35.78 
 
 		 211 aa  132  5e-30  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  1  n/a   
 
 
-
 
NC_013159  Svir_33010  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  39.34 
 
 		 223 aa  132  5e-30  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.163463  normal  1 
 
 
-
 
NC_011772  BCG9842_B5417  DNA-binding response regulator  36.02 
 
 		 215 aa  131  6e-30  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  34.34 
 
 		 208 aa  132  6e-30  Thermoanaerobacter sp. X514  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  38.39 
 
 		 221 aa  131  6e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_013757  Gobs_2145  two component transcriptional regulator, LuxR family  40.1 
 
 		 220 aa  132  6e-30  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.0196231  n/a   
 
 
-
 
NC_013739  Cwoe_2472  two component transcriptional regulator, LuxR family  40.09 
 
 		 221 aa  131  6.999999999999999e-30  Conexibacter woesei DSM 14684  Bacteria  normal  0.0113125  hitchhiker  0.00367669 
 
 
-
 
NC_014248  Aazo_0236  LuxR family two component transcriptional regulator  37.86 
 
 		 218 aa  131  6.999999999999999e-30  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_4051  two component transcriptional regulator, LuxR family  37.44 
 
 		 225 aa  131  7.999999999999999e-30  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.00308286  n/a   
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  39.11 
 
 		 224 aa  131  7.999999999999999e-30  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_003909  BCE_2293  LuxR family DNA-binding response regulator  37 
 
 		 211 aa  131  9e-30  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  38.79 
 
 		 222 aa  131  9e-30  Roseiflexus castenholzii DSM 13941  Bacteria  normal  1  normal  0.764026 
 
 
-
 
NC_002976  SERP1384  LuxR family DNA-binding response regulator  35.35 
 
 		 207 aa  130  1.0000000000000001e-29  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.000639089  n/a   
 
 
-
 
NC_007777  Francci3_1039  two component LuxR family transcriptional regulator  37.26 
 
 		 238 aa  130  1.0000000000000001e-29  Frankia sp. CcI3  Bacteria  normal  1  normal  0.135118 
 
 
-
 
NC_013947  Snas_5262  two component transcriptional regulator, LuxR family  39.15 
 
 		 219 aa  130  1.0000000000000001e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_3669  response regulator receiver protein  39.44 
 
 		 213 aa  129  2.0000000000000002e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_2533  response regulator receiver protein  38.76 
 
 		 220 aa  130  2.0000000000000002e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.495874 
 
 
-
 
NC_014210  Ndas_2024  two component transcriptional regulator, LuxR family  37.61 
 
 		 220 aa  129  2.0000000000000002e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.876474  normal  1 
 
 
-
 
NC_009523  RoseRS_0454  two component LuxR family transcriptional regulator  38.16 
 
 		 208 aa  130  2.0000000000000002e-29  Roseiflexus sp. RS-1  Bacteria  normal  0.698939  hitchhiker  0.00367889 
 
 
-
 
NC_011725  BCB4264_A2245  DNA-binding response regulator, LuxR family  34.6 
 
 		 213 aa  130  2.0000000000000002e-29  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_1782  two component LuxR family transcriptional regulator  40.37 
 
 		 230 aa  129  2.0000000000000002e-29  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.0025253 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  37.09 
 
 		 215 aa  129  2.0000000000000002e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_5540  DNA-binding response regulator  35.55 
 
 		 215 aa  129  3e-29  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_0335  two component transcriptional regulator, LuxR family  38.18 
 
 		 220 aa  129  3e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  35.07 
 
 		 215 aa  129  3e-29  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_1883  two component transcriptional regulator, LuxR family  42.44 
 
 		 215 aa  129  3e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.0780809 
 
 
-
 
NC_011658  BCAH187_A5591  DNA-binding response regulator  35.55 
 
 		 215 aa  129  3e-29  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5506  DNA-binding response regulator  35.55 
 
 		 215 aa  129  4.0000000000000003e-29  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_005945  BAS5263  DNA-binding response regulator  35.55 
 
 		 215 aa  129  4.0000000000000003e-29  Bacillus anthracis str. Sterne  Bacteria  normal  0.24037  n/a   
 
 
-
 
NC_005957  BT9727_5091  response regulator  35.55 
 
 		 215 aa  129  4.0000000000000003e-29  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_006274  BCZK5108  response regulator  35.55 
 
 		 215 aa  129  4.0000000000000003e-29  Bacillus cereus E33L  Bacteria  decreased coverage  0.00235048  n/a   
 
 
-
 
NC_007530  GBAA_5661  DNA-binding response regulator  35.55 
 
 		 215 aa  129  4.0000000000000003e-29  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_013510  Tcur_0500  two component transcriptional regulator, LuxR family  40.87 
 
 		 226 aa  129  4.0000000000000003e-29  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  39.53 
 
 		 225 aa  129  4.0000000000000003e-29  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.114252 
 
 
-
 
NC_013093  Amir_3314  two component transcriptional regulator, LuxR family  39.05 
 
 		 222 aa  129  4.0000000000000003e-29  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.00833126  n/a   
 
 
-
 
NC_008697  Noca_4902  response regulator receiver  40.19 
 
 		 216 aa  129  4.0000000000000003e-29  Nocardioides sp. JS614  Bacteria  normal  0.443208  normal  0.676579 
 
 
-
 
NC_009656  PSPA7_1229  transcriptional regulator NarL  37.14 
 
 		 219 aa  129  4.0000000000000003e-29  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  38.68 
 
 		 218 aa  129  4.0000000000000003e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_008463  PA14_13730  transcriptional regulator NarL  37.14 
 
 		 219 aa  129  5.0000000000000004e-29  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  0.817999 
 
 
-
 
NC_013093  Amir_3696  two component transcriptional regulator, LuxR family  38.68 
 
 		 217 aa  128  5.0000000000000004e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013521  Sked_03540  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  37.79 
 
 		 226 aa  129  5.0000000000000004e-29  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_0199  response regulator receiver protein  39.44 
 
 		 213 aa  129  5.0000000000000004e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  39.23 
 
 		 222 aa  128  5.0000000000000004e-29  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal  1 
 
 
-
 
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