| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_2876 |
|---|
| Symbol | |
|---|
| ID | 9139588 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Planctomyces limnophilus DSM 3776 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014148 |
|---|
| Strand | + |
|---|
| Start bp | 3725389 |
|---|
| End bp | 3726243 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | response regulator receiver |
|---|
| Protein accession | YP_003630897 |
|---|
| Protein GI | 296123119 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGATGT TGCCTCACAC ACCGCTGTCT TTCCCGGGTA TTTCGTTTCC GACGACGAGT
CATTCTGCTT CCTCAACAGT CACTGGCGTC CAAGCGGTGA CAGATCATGC TGAATCCCTA
GGGATGGTCA CAGAGACAGC CCTGAAGGAT GTCACAGATA AGCAGGAAAC CCGAACTTCC
GTCAGGCCCC ATCGAGTGGG GAATCGTCTG GTGCGTGTCT ATCTGGTTGA TGATCATCAG
ATGATTCTCG ATTGTCTTTC AGCTTATCTG ACGGCTGACA GTCAGTTTGA AGTCGTCGGA
AAAGCGACCA ACACTGAACA GGCGCTGCTG GAAATTGCAC AGATACAGCC TGATGTCGTG
GTCATGGATG TGGAGCTGCC GGGTCGAAGC GTCTTCGATG TGGCCGAAAC CTTGCGCACA
AAAGCACATA GCGTTCGCGT GATATACCTT TCTGGTTACG CGAGTGATGT GCTTCTATCG
AGGGCCCTGA AGCCTGGATG CTTTGGGTAT CTGCTCAAGG GAGAGCCAGT CAGCGCTATC
CGCCAGGCAA TTCTTCGGGC GATTGATGGT GAGATGAGCT TTTCTCCGGA GATCCGGCAG
AGGCTGGCAC AGGATCCTGT TTCCCGCCGG TTTTCACTCC CGGCAGATAC GCCGCTGACA
GGCTTGACGG GGCGTCAGTT GGAAGTTCTG CGGCATCTGG CGAATGGCGC CAGCGTGAAA
GAGATTGCCC GCCTGATGCA TCTTTCACAA AAATCAGTGG ACAGCCATAA ATACAGAATT
ATGCACAAGT TGGGAATTCA TGACCGGGTG GAACTGGCGC GGTTTGCCAT TCGCGAAGGA
TTGACGAAGC CTTAA
|
|---|
| Protein sequence | MVMLPHTPLS FPGISFPTTS HSASSTVTGV QAVTDHAESL GMVTETALKD VTDKQETRTS
VRPHRVGNRL VRVYLVDDHQ MILDCLSAYL TADSQFEVVG KATNTEQALL EIAQIQPDVV
VMDVELPGRS VFDVAETLRT KAHSVRVIYL SGYASDVLLS RALKPGCFGY LLKGEPVSAI
RQAILRAIDG EMSFSPEIRQ RLAQDPVSRR FSLPADTPLT GLTGRQLEVL RHLANGASVK
EIARLMHLSQ KSVDSHKYRI MHKLGIHDRV ELARFAIREG LTKP
|
|---|
| |