Gene Acid345_3748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_3748 
Symbol 
ID4069323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp4421127 
End bp4421762 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content57% 
IMG OID637985770 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_592822 
Protein GI94970774 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.107866 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGGTCG CTGCAAGCAA GTCGATCCGG ATCCTCAGCG TGGAAGACCA CCCGGTCGTT 
CGCGAAGGAC TTGTTTCGAT TATCGGTTCT CAGCCGGACA TGGTGCTCGT CGCCCAAGCC
ACCAATGGTA GCGATGCCAT TGCTCAGTTC CGCACCCATC ACCCTGACAT CACTCTGATG
GATCTTCGCC TCCCTGGCAT CAGCGGCACA GATGCGCTGA TCTCAATCCG TGGCGAGTTT
CCCAGGGCAC GCGTCATTAT TCTCACGACA TCCGACAGCC ATACGGAAAT CGACCGCGCT
CTGCGCGCAG GCGCTGCGGC CTATATTCTG AAGAGCATGC CCATGAACGA GATGCTTGCC
GTGATTCGCT CGGTGCATGC CGGCGCACGC CACATTCCGC AGGAAGTGGC TTCCCGACTC
GCCGAGAATA TTGGAGAAGA AAGCCTAACC TCGCGGGAAC TAGAAGTGCT GCATCTGATT
CGCGATGGCC ATCGCAACAA GCAGATCGCG GATGAGCTGT CGATTTCAGA AACCACGGTG
AATTTCCATA TCAAGAACAT TGTGGGCAAG ATGGGAGCAA ACGATCGCAC CCATGCTGTA
ACGATCGCAG TTCGCCGCGG CCTTCTTCAG ATCTGA
 
Protein sequence
MAVAASKSIR ILSVEDHPVV REGLVSIIGS QPDMVLVAQA TNGSDAIAQF RTHHPDITLM 
DLRLPGISGT DALISIRGEF PRARVIILTT SDSHTEIDRA LRAGAAAYIL KSMPMNEMLA
VIRSVHAGAR HIPQEVASRL AENIGEESLT SRELEVLHLI RDGHRNKQIA DELSISETTV
NFHIKNIVGK MGANDRTHAV TIAVRRGLLQ I