282 homologs were found in PanDaTox collection
for query gene CFF8240_0935 on replicon NC_008599
Organism: Campylobacter fetus subsp. fetus 82-40



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009715  CCV52592_1898  [NiFe] hydrogenase maturation protein HypF  52.8 
 
 
739 aa  793    Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_009707  JJD26997_1047  [NiFe] hydrogenase maturation protein HypF  46.98 
 
 
729 aa  640    Campylobacter jejuni subsp. doylei 269.97  Bacteria  normal  0.0365052  n/a   
 
 
-
 
NC_008599  CFF8240_0935  [NiFe] hydrogenase maturation protein HypF  100 
 
 
741 aa  1507    Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.993147  n/a   
 
 
-
 
NC_008787  CJJ81176_0651  [NiFe] hydrogenase maturation protein HypF  46.93 
 
 
728 aa  643    Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_0356  [NiFe] hydrogenase maturation protein HypF  52.46 
 
 
741 aa  773    Campylobacter concisus 13826  Bacteria  normal  0.0522956  n/a   
 
 
-
 
NC_012039  Cla_0792  transcriptional regulatory protein HypF  47.09 
 
 
732 aa  632  1e-180  Campylobacter lari RM2100  Bacteria  normal  0.0531432  n/a   
 
 
-
 
NC_003912  CJE0725  [NiFe] hydrogenase maturation protein HypF  46.98 
 
 
729 aa  627  1e-178  Campylobacter jejuni RM1221  Bacteria  normal  0.618287  n/a   
 
 
-
 
NC_013512  Sdel_1101  (NiFe) hydrogenase maturation protein HypF  42.37 
 
 
744 aa  596  1e-169  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_1760  (NiFe) hydrogenase maturation protein HypF  38.37 
 
 
781 aa  539  9.999999999999999e-153  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_1431  hydrogenase maturation protein HypF  40.99 
 
 
742 aa  536  1e-151  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_1903  (NiFe) hydrogenase maturation protein HypF  39.82 
 
 
783 aa  537  1e-151  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000745392 
 
 
-
 
NC_011661  Dtur_0080  (NiFe) hydrogenase maturation protein HypF  40.75 
 
 
741 aa  531  1e-149  Dictyoglomus turgidum DSM 6724  Bacteria  normal  0.442925  n/a   
 
 
-
 
NC_008700  Sama_1674  hydrogenase maturation protein HypF  38.67 
 
 
771 aa  531  1e-149  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_2028  (NiFe) hydrogenase maturation protein HypF  37.66 
 
 
800 aa  526  1e-148  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_2035  (NiFe) hydrogenase maturation protein HypF  37.06 
 
 
775 aa  525  1e-147  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_011729  PCC7424_3682  (NiFe) hydrogenase maturation protein HypF  38.03 
 
 
780 aa  516  1.0000000000000001e-145  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011726  PCC8801_3588  (NiFe) hydrogenase maturation protein HypF  38.2 
 
 
776 aa  516  1.0000000000000001e-145  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013161  Cyan8802_2526  (NiFe) hydrogenase maturation protein HypF  38.26 
 
 
780 aa  513  1e-144  Cyanothece sp. PCC 8802  Bacteria  normal  0.908669  normal  0.241645 
 
 
-
 
NC_011126  HY04AAS1_0046  (NiFe) hydrogenase maturation protein HypF  40.7 
 
 
736 aa  504  1e-141  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  0.890039  n/a   
 
 
-
 
NC_011899  Hore_03890  (NiFe) hydrogenase maturation protein HypF  38.93 
 
 
751 aa  501  1e-140  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1910  (NiFe) hydrogenase maturation protein HypF  36.6 
 
 
838 aa  494  9.999999999999999e-139  Shewanella baltica OS185  Bacteria  normal  0.402426  n/a   
 
 
-
 
NC_013501  Rmar_2593  (NiFe) hydrogenase maturation protein HypF  37.12 
 
 
773 aa  492  9.999999999999999e-139  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_008312  Tery_0792  (NiFe) hydrogenase maturation protein HypF  38.08 
 
 
785 aa  495  9.999999999999999e-139  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_1884  (NiFe) hydrogenase maturation protein HypF  36.24 
 
 
837 aa  492  9.999999999999999e-139  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2409  (NiFe) hydrogenase maturation protein HypF  36.07 
 
 
840 aa  494  9.999999999999999e-139  Shewanella baltica OS223  Bacteria  normal  0.0878931  hitchhiker  0.000263976 
 
 
-
 
NC_009997  Sbal195_1917  (NiFe) hydrogenase maturation protein HypF  36.07 
 
 
840 aa  491  1e-137  Shewanella baltica OS195  Bacteria  normal  0.998639  normal 
 
 
-
 
NC_008577  Shewana3_1875  (NiFe) hydrogenase maturation protein HypF  35.86 
 
 
835 aa  489  1e-137  Shewanella sp. ANA-3  Bacteria  normal  0.386195  normal 
 
 
-
 
NC_014248  Aazo_3875  (NiFe) hydrogenase maturation protein HypF  37.82 
 
 
781 aa  490  1e-137  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_2094  hydrogenase maturation protein HypF  35.34 
 
 
808 aa  486  1e-136  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_2093  (NiFe) hydrogenase maturation protein HypF  36.28 
 
 
801 aa  486  1e-136  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4602  hydrogenase maturation protein HypF  37.61 
 
 
786 aa  483  1e-135  Anabaena variabilis ATCC 29413  Bacteria  normal  0.879827  normal 
 
 
-
 
NC_009077  Mjls_2123  (NiFe) hydrogenase maturation protein HypF  36.07 
 
 
752 aa  479  1e-134  Mycobacterium sp. JLS  Bacteria  normal  normal  0.0252603 
 
 
-
 
NC_008705  Mkms_2182  (NiFe) hydrogenase maturation protein HypF  35.87 
 
 
752 aa  480  1e-134  Mycobacterium sp. KMS  Bacteria  normal  0.64195  normal  0.285243 
 
 
-
 
NC_007514  Cag_0533  hydrogenase maturation protein HypF  35.63 
 
 
749 aa  478  1e-133  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.515959  n/a   
 
 
-
 
NC_008146  Mmcs_2136  (NiFe) hydrogenase maturation protein HypF  36.07 
 
 
745 aa  477  1e-133  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_1817  (NiFe) hydrogenase maturation protein HypF  34.58 
 
 
836 aa  477  1e-133  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_2160  (NiFe) hydrogenase maturation protein HypF  34.36 
 
 
840 aa  477  1e-133  Shewanella sp. MR-7  Bacteria  normal  normal  0.66513 
 
 
-
 
NC_008345  Sfri_2108  (NiFe) hydrogenase maturation protein HypF  35.71 
 
 
803 aa  476  1e-133  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_0462  (NiFe) hydrogenase maturation protein HypF  37.47 
 
 
790 aa  474  1e-132  Clostridium cellulolyticum H10  Bacteria  normal  0.336397  n/a   
 
 
-
 
NC_011830  Dhaf_3636  (NiFe) hydrogenase maturation protein HypF  37.47 
 
 
758 aa  472  1.0000000000000001e-131  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009523  RoseRS_2556  (NiFe) hydrogenase maturation protein HypF  37.47 
 
 
776 aa  470  1.0000000000000001e-131  Roseiflexus sp. RS-1  Bacteria  normal  0.34978  normal  0.63544 
 
 
-
 
NC_008554  Sfum_4013  (NiFe) hydrogenase maturation protein HypF  36.02 
 
 
770 aa  469  9.999999999999999e-131  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.31364 
 
 
-
 
NC_014165  Tbis_3230  (NiFe) hydrogenase maturation protein HypF  35.18 
 
 
783 aa  464  1e-129  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_0466  (NiFe) hydrogenase maturation protein HypF  34.21 
 
 
778 aa  464  1e-129  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.252806  normal  0.0404368 
 
 
-
 
NC_013595  Sros_3809  (NiFe) hydrogenase maturation protein HypF  35.33 
 
 
775 aa  461  9.999999999999999e-129  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0483302  normal  0.0563214 
 
 
-
 
NC_009767  Rcas_1847  (NiFe) hydrogenase maturation protein HypF  36.52 
 
 
779 aa  462  9.999999999999999e-129  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.962683  normal 
 
 
-
 
NC_012918  GM21_1130  (NiFe) hydrogenase maturation protein HypF  36.03 
 
 
758 aa  460  9.999999999999999e-129  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013159  Svir_07990  (NiFe) hydrogenase maturation protein HypF  35.12 
 
 
762 aa  461  9.999999999999999e-129  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.442936  normal 
 
 
-
 
NC_009429  Rsph17025_3377  nickel-dependent hydrogenase, large subunit  35.79 
 
 
758 aa  459  9.999999999999999e-129  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.457459  normal 
 
 
-
 
NC_007604  Synpcc7942_2551  (NiFe) hydrogenase maturation protein HypF  34.05 
 
 
770 aa  456  1e-127  Synechococcus elongatus PCC 7942  Bacteria  normal  0.102731  normal 
 
 
-
 
NC_010814  Glov_3065  (NiFe) hydrogenase maturation protein HypF  36.52 
 
 
740 aa  456  1e-127  Geobacter lovleyi SZ  Bacteria  normal  0.735347  n/a   
 
 
-
 
NC_011773  BCAH820_3291  hydrogenase maturation protein HypF  38.2 
 
 
776 aa  457  1e-127  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_0310  (NiFe) hydrogenase maturation protein HypF  34.19 
 
 
792 aa  457  1e-127  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_002936  DET1432  [NiFe] hydrogenase maturation protein HypF  37.23 
 
 
763 aa  454  1.0000000000000001e-126  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS3070  hydrogenase maturation protein HypF  38.06 
 
 
776 aa  453  1.0000000000000001e-126  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_1950  (NiFe) hydrogenase maturation protein HypF  34.88 
 
 
756 aa  455  1.0000000000000001e-126  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_3313  hydrogenase maturation protein HypF  38.06 
 
 
776 aa  453  1.0000000000000001e-126  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009475  BBta_p0172  carbamoyltransferase hypF  34.67 
 
 
755 aa  453  1.0000000000000001e-126  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal 
 
 
-
 
NC_010644  Emin_0391  (NiFe) hydrogenase maturation protein HypF  39.32 
 
 
736 aa  456  1.0000000000000001e-126  Elusimicrobium minutum Pei191  Bacteria  hitchhiker  0.00000910038  hitchhiker  0.000000117936 
 
 
-
 
NC_013947  Snas_3446  (NiFe) hydrogenase maturation protein HypF  34.4 
 
 
764 aa  454  1.0000000000000001e-126  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.629954 
 
 
-
 
NC_013165  Shel_00540  (NiFe) hydrogenase maturation protein HypF  34.06 
 
 
785 aa  453  1.0000000000000001e-126  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.48639  normal 
 
 
-
 
NC_008726  Mvan_2407  (NiFe) hydrogenase maturation protein HypF  36.22 
 
 
756 aa  452  1.0000000000000001e-126  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.258708 
 
 
-
 
NC_011146  Gbem_3132  (NiFe) hydrogenase maturation protein HypF  36.44 
 
 
758 aa  451  1e-125  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0306  hydrogenase maturation protein HypF  35.83 
 
 
763 aa  449  1e-125  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0555  (NiFe) hydrogenase maturation protein HypF  34.9 
 
 
777 aa  450  1e-125  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_009455  DehaBAV1_1240  (NiFe) hydrogenase maturation protein HypF  36.7 
 
 
763 aa  452  1e-125  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_3016  (NiFe) hydrogenase maturation protein HypF  35.51 
 
 
753 aa  452  1e-125  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010655  Amuc_1399  (NiFe) hydrogenase maturation protein HypF  34.48 
 
 
775 aa  446  1.0000000000000001e-124  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.159442  normal 
 
 
-
 
NC_013552  DhcVS_1214  hydrogenase maturation protein HypF  36.84 
 
 
763 aa  446  1.0000000000000001e-124  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_4584  (NiFe) hydrogenase maturation protein HypF  35.42 
 
 
774 aa  447  1.0000000000000001e-124  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3979  (NiFe) hydrogenase maturation protein HypF  36.35 
 
 
756 aa  447  1.0000000000000001e-124  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0803247  normal 
 
 
-
 
NC_008609  Ppro_2780  (NiFe) hydrogenase maturation protein HypF  34.51 
 
 
780 aa  447  1.0000000000000001e-124  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_1218  (NiFe) hydrogenase maturation protein HypF  35.68 
 
 
762 aa  446  1.0000000000000001e-124  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.0610478 
 
 
-
 
NC_013173  Dbac_1787  (NiFe) hydrogenase maturation protein HypF  34.47 
 
 
766 aa  443  1e-123  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1303  (NiFe) hydrogenase maturation protein HypF  33.2 
 
 
781 aa  443  1e-123  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.083014  normal  0.0845078 
 
 
-
 
NC_009485  BBta_0471  carbamoyl phosphate phosphatase, (NiFe) hydrogenase maturation protein  33.46 
 
 
824 aa  442  1e-123  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0655217 
 
 
-
 
NC_010803  Clim_1785  (NiFe) hydrogenase maturation protein HypF  34.4 
 
 
764 aa  439  9.999999999999999e-123  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.00144703  n/a   
 
 
-
 
NC_011761  AFE_0712  [NiFe] hydrogenase maturation protein HypF  35.03 
 
 
803 aa  439  9.999999999999999e-123  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_0860  (NiFe) hydrogenase maturation protein HypF  35.03 
 
 
803 aa  439  9.999999999999999e-123  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.729638  normal 
 
 
-
 
NC_007517  Gmet_0119  hydrogenase maturation protein HypF  35.69 
 
 
760 aa  442  9.999999999999999e-123  Geobacter metallireducens GS-15  Bacteria  normal  0.0111799  normal 
 
 
-
 
NC_008036  Sala_3207  (NiFe) hydrogenase maturation protein HypF  35.88 
 
 
793 aa  442  9.999999999999999e-123  Sphingopyxis alaskensis RB2256  Bacteria  n/a    n/a   
 
 
-
 
NC_008639  Cpha266_0722  (NiFe) hydrogenase maturation protein HypF  35.2 
 
 
773 aa  440  9.999999999999999e-123  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.180457  n/a   
 
 
-
 
NC_006368  lpp2539  hydrogenase maturation protein HypF  35.27 
 
 
741 aa  436  1e-121  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl2394  hydrogenase maturation protein HypF  35.14 
 
 
741 aa  438  1e-121  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013170  Ccur_01180  (NiFe) hydrogenase maturation protein HypF  34.4 
 
 
848 aa  437  1e-121  Cryptobacterium curtum DSM 15641  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4555  (NiFe) hydrogenase maturation protein HypF  34.61 
 
 
785 aa  439  1e-121  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_008009  Acid345_0926  (NiFe) hydrogenase maturation protein HypF  36.12 
 
 
740 aa  438  1e-121  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  hitchhiker  0.00154315 
 
 
-
 
NC_013158  Huta_2342  (NiFe) hydrogenase maturation protein HypF  33.55 
 
 
766 aa  438  1e-121  Halorhabdus utahensis DSM 12940  Archaea  normal  n/a   
 
 
-
 
NC_009714  CHAB381_0866  [NiFe] hydrogenase maturation protein HypF  52.35 
 
 
1124 aa  434  1e-120  Campylobacter hominis ATCC BAA-381  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1645  (NiFe) hydrogenase maturation protein HypF  34.78 
 
 
773 aa  434  1e-120  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_0469  (NiFe) hydrogenase maturation protein HypF  33.42 
 
 
818 aa  434  1e-120  Cyanothece sp. PCC 7425  Bacteria  normal  0.77158  normal  0.0779955 
 
 
-
 
NC_011370  Rleg2_6177  (NiFe) hydrogenase maturation protein HypF  34.46 
 
 
784 aa  430  1e-119  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.869284  normal  0.0868727 
 
 
-
 
NC_010627  Bphy_7272  (NiFe) hydrogenase maturation protein HypF  34.47 
 
 
791 aa  428  1e-118  Burkholderia phymatum STM815  Bacteria  normal  0.640566  normal  0.270214 
 
 
-
 
NC_002977  MCA1604  [NiFe] hydrogenase maturation protein HypF  33.92 
 
 
754 aa  426  1e-118  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0518  (NiFe) hydrogenase maturation protein HypF  33.42 
 
 
781 aa  429  1e-118  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.843265 
 
 
-
 
NC_007614  Nmul_A1668  (NiFe) hydrogenase maturation protein HypF  35.29 
 
 
770 aa  429  1e-118  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_2179  (NiFe) hydrogenase maturation protein HypF  34.81 
 
 
767 aa  427  1e-118  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.474067 
 
 
-
 
NC_007777  Francci3_1945  (NiFe) hydrogenase maturation protein HypF  34.37 
 
 
816 aa  428  1e-118  Frankia sp. CcI3  Bacteria  normal  0.368168  normal 
 
 
-
 
NC_011004  Rpal_1167  (NiFe) hydrogenase maturation protein HypF  33.29 
 
 
757 aa  428  1e-118  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_4097  (NiFe) hydrogenase maturation protein HypF  32.81 
 
 
789 aa  426  1e-118  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
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