Gene Sdel_1101 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSdel_1101 
Symbol 
ID8592639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurospirillum deleyianum DSM 6946 
KingdomBacteria 
Replicon accessionNC_013512 
Strand
Start bp1119037 
End bp1121271 
Gene Length2235 bp 
Protein Length744 aa 
Translation table11 
GC content40% 
IMG OID 
Product(NiFe) hydrogenase maturation protein HypF 
Protein accessionYP_003304160 
Protein GI268679729 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATCAGTG ATATACGGTT TCGATATGGT ATTGAGGGAA TAGTTCAAGG GGTTGGTTTT 
CGCCCCTTTG TCTATACCCT AGCACTTCGT TATGGGCTTT TTGGTTTTGT GCTGAACAAT
GAAAAAGGTG TGGTTATTGA GGTTGAGGGC TCTTTCATGA GCCTTGAATC TTTTGAATCC
GCTTTGTTCC ATGAACTTCC GTCGTTAGCT CGTATTGATT TTTTTACCAA AGAAGAGATA
CCTCCTCAGT ATGAAAAGAG CTTTGAGATT GCTCATAGCA CAAAGGGAAG CCATAAATCC
TCTTTAATCT TGCCTGACAT GTCGTTGTGC GATGCGTGTT TGAAAGAGTT ACACGACCCC
AATAATCGAC GCTATCACTA TTTTTTTACA AACTGTACCA ACTGTGGCCC TCGTTACTCC
ATCGTGAAAA CAGTTCCTTA TGACAGACCC AACACCTCTA TGCATCCTTT TTGCATGTGT
GAAGCGTGTC AGAAGGAGTA CACTAATCCG CTTGATAGAC GCTATCATGC CCAACCCATT
AGTTGTATAG AGTGTGGACC AACACTCTTT TTACGTTCTA TTGAGGGGAA AATTGTTGCG
ACCAATGAAG CAGCTTTACA CCATCTAGCC GCATTAATTC GCGCTGGAAA TATCGTTGCA
ATGAAGGGTA TGGGTGGGTT TCATTTGGTG TGTGACGCAA GCAATGAAAA AGTTGTCCAT
CGTTTAAGAG AGCGTAAAAA AAGAGCGTCA AAACCGTTTG CGGTGATGTT TAAAACCATA
GAGGCTATTG AAGCGGTGTG TGAAGTTGGC ATCAAAGAAA AAGAAGCCAT AACCTCTTTA
CTTCGACCGA TTGTTTTAGT TAAACATCAA ACGAAGAATA CCCTCATCGC ACCGAGTGTC
GCTCCAAGGT TGGATCGACT GGGCGTTTTC TTACCCTATA CTCCTTTACA TGTTATGTTA
TTTGAGTACC TTAAAAATCC TATGGTTGCT ACCAGCGCAA ACCTCTCTGG TGAACCTATT
CTATACGATG CCAAACAGGT CGTTGAAAAG TTAAGCCATG TGATTGACTA TTATCTTGAC
TACAACCGTG AAATTGTCAA TTCAAGTGAT GATAGCGTGG TACAGTTTGT AGGAGATGCA
AGGATACTCA TGCGCTCCTC ACGTGGAATT GCGCCACAAA GTTTTCGCTT TGTGGGTGAG
GATGAACGAA AGATTCTCTG CGTGGGAGCA CATCAAAAAA ATGCGATTGC TATTTATTGG
AATCATCAAA TGGTGATTAG CCCTTATATT GGAGATTTGG ATACGCTTGC GTCGTGTGAA
TTGTTTGAAG CGATGCTCGA ACGGTTTAAA CGTTTTTATA ATTTTGAGCC AGAATTGATT
GTTGCAGATA AGCATCCTCG TTATTTTTCA ACCCAATGGG CACAAAAACA AGGAATTCCT
TATGTTTTAG TTCAGCACCA TTATGCACAC ATCCTCTCTG CGATGTGTGA ACATAAACTG
AATGAGACTG TTTTAGGCAT TGCGTGGGAT GGAACAGGCT ATGGAGAGGA TGGGACAATT
TGGGGTGGTG AGTTTTTGGT GTGCGATAGA GAAAAGTATG AGCGTGTGGC GTATTTTGAA
CCCTTTGCAC TTTTAGGTGG GGATGCGAGC ATTAAAGATA TTAAGCGCAT TCTAGCTTCT
CTTCTTTGGG ATGCTCTAGG AGAAGATGCG AATGCTGTAT TGTTGGAGTA TTTTGATGCT
TTGGCACTGA AGCGTTTACA CCAAGTCTAT CATAAAAAAA TCAATTCTCC TTTATGCTCT
TCTGTGGGAC GGCTTTTTGA TGCTGTGGCT GTTCTGTGCG GTTTGGAGGG TGAAGTGAGT
TACGATGGAG AGAGTGGATT ACTGATTGAA GGATTGTTTA ATCCCTCTAT TCGTGAACAC
TATACGGTGA CATTTAGAGA AAAAGAGATT GGCTATAAAG TGATGTTTAT AGAGATGATT
CAGGATAAGG AACCTTCTTT AATTGCTTCA AAATTTCTCA ATACATTGGT TTATATTTTT
AATGAAGTAA CGCAAAAATA TCCTTATAAA AAAGTAGTTG CAGGAGGCGT GTTTCAAAAT
CGCACACTTT TAGAACAACT CCTTGAGAAA AGGGAAGAAA AGCTCTATTT TCCACATAAT
ATTGCCATTA ATGATGGAGG AATTTGTGTG GGTCAACTCT ATAAAGTGTT ACAAAATAGT
ACATATTTGT TATAA
 
Protein sequence
MISDIRFRYG IEGIVQGVGF RPFVYTLALR YGLFGFVLNN EKGVVIEVEG SFMSLESFES 
ALFHELPSLA RIDFFTKEEI PPQYEKSFEI AHSTKGSHKS SLILPDMSLC DACLKELHDP
NNRRYHYFFT NCTNCGPRYS IVKTVPYDRP NTSMHPFCMC EACQKEYTNP LDRRYHAQPI
SCIECGPTLF LRSIEGKIVA TNEAALHHLA ALIRAGNIVA MKGMGGFHLV CDASNEKVVH
RLRERKKRAS KPFAVMFKTI EAIEAVCEVG IKEKEAITSL LRPIVLVKHQ TKNTLIAPSV
APRLDRLGVF LPYTPLHVML FEYLKNPMVA TSANLSGEPI LYDAKQVVEK LSHVIDYYLD
YNREIVNSSD DSVVQFVGDA RILMRSSRGI APQSFRFVGE DERKILCVGA HQKNAIAIYW
NHQMVISPYI GDLDTLASCE LFEAMLERFK RFYNFEPELI VADKHPRYFS TQWAQKQGIP
YVLVQHHYAH ILSAMCEHKL NETVLGIAWD GTGYGEDGTI WGGEFLVCDR EKYERVAYFE
PFALLGGDAS IKDIKRILAS LLWDALGEDA NAVLLEYFDA LALKRLHQVY HKKINSPLCS
SVGRLFDAVA VLCGLEGEVS YDGESGLLIE GLFNPSIREH YTVTFREKEI GYKVMFIEMI
QDKEPSLIAS KFLNTLVYIF NEVTQKYPYK KVVAGGVFQN RTLLEQLLEK REEKLYFPHN
IAINDGGICV GQLYKVLQNS TYLL