| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MCA1604 |
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| Symbol | hypF |
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| ID | 3104635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylococcus capsulatus str. Bath |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002977 |
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| Strand | + |
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| Start bp | 1710851 |
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| End bp | 1713115 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637170772 |
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| Product | [NiFe] hydrogenase maturation protein HypF |
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| Protein accession | YP_114054 |
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| Protein GI | 53804353 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein
[TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGACCG CCCAGCGCAT CCAGGTCCGC GGCCGTGTGC AAGGCGTGGG GTTCCGCCCC
TTCGTCTGCC GGCTCGCCCG CGAATTCGGC CTCGCCGGCT GGGTGAGGAA CCGCGGCGGC
GGCGTCGAAA TCCACGCCGA AGGCGATCCA GCCGCGATCG AGCGGCTCAT CGACGCACTG
GTCTCCCGTG CCCCGCCGCT GGCCGATCCG CAGCCGCCCG TTCACCGGCC CGCCGAATTC
CGGGGCTACG CCGGGTTCGA AATCCTGCTC AGCGATTCCG GGGACAAAAC GCCCATCCAC
GTGCCGCCGG ACCACTTCGT CTGCCCCGAT TGCCTGGACG AAATGCGAGA CCCCGCCGCC
CGCCGCTACC GCTACCCCTT CATCAACTGC ACCCAATGCG GGCCGCGCTA CACCCTCATC
GACCGGCTGC CCTACGACCG CCCGAACACC GCGATGGCGG ACTTCCCGCT GTGCCAGGAC
TGCCGGCGCG AGTACGAAGA CATTCACGAC CGGCGCTACC ACGCCCAGCC GCTGGCCTGT
CCTCTGTGCG GGCCGGTGCT GGAATTTCGC GAGCTGTCCG CATGCATCGC CATACCGGGT
AACGAACCGG CGCTCTCGGG CTGCATCGAA GCCCTACGGC AAGGCCAGGT CGTCGCCGTC
AAAGGCGTCG GCGGCTACCA CCTCCTCTGC GACGCCCGCT CGGATGCCGC CGTCGGGCGC
CTGCGCGAAC GCAAACGCCG CCCGGACAAA CCCCTCGCGG TGCTGATCCC CTGGTTCGAA
GGCGAAGGGG TCGATTGGCT GGCACGCCTG GCCGAGCCGC GCCCTGACGA ACGCGAACTG
CTGGCATCCC CGCTCCGACC CATCGTCATC GTGCAACGCT CCGTCGACAG CGATCTGTCC
GGCCTCATCG CGCCGGGCCT GGACGAGATC GGCCTGATGT ACCCCTACAG CCCGCTGCAT
CACCTGCTGG CGGGCGACTA TGGCGCGCCG CTGGTCGCCA CTTCGGCCAA CCTCAGCGGC
GAGCCGGTGC TGACCGACGG CGCGGAAGTC GAGCGCCAGC TGGCTCACGT CGCCGATGCC
TTCCTGCATC ATGACCGGCC GATCCGCCGG CCCGCCGACG ACTCGGTTTA CCGCCGCAGC
GCCGGGAGTA TGCGGCCCTT GCGGCTGGGT CGCGGTACGG CGCCGCTCGA AATGCCTCTC
CGCTACCCGG TGGCCGAACC CACTCTTGCG CTCGGGGCCG ATCTCAAGAA CACCATTGCC
CTGGCCTTCG AAGACCGCGC GGTCGTCTCC CCGCACCTCG GCAATCTCGG CGCGCCGCGC
AGCCTCGACG TATTCGGGCA ACTGATTCGG GAGCTGTCCG CCTTGTACGG GATCGCGCCG
AAGCGGGTGG TCTGCGACGC TCACCCCGAC TACTTCTCCA GTCGCTGGGC CCGGGCCTGC
GGGCTCGAAA TTCACCGCGT CCTCCACCAC CATGCACACG CCTCGGCGCT TTACGGCGAG
TTCGGGCCGG ACGGCGACAT CCTGGTGTTC GCCTGGGACG GCACCGGCTT CGGCGGCGAC
GGCACCCTGT GGGGCGGCGA AACCCTGCTC GGCCGGCCTG GCGGCTGGCG CCGGGTCGGA
AGCCTGCGGC CGTTCCGGCT CATCGGAGGC GAAAAGGCCA GCGCCGAGCC CTGGCGCTGC
GCGCTCGCGG CCTGCTGGGA AGCGGGGCTG GACTGGTCCG GCTGCCCGGT GGACCCCGCG
CCGTATCGGC ACGTCTGGGA ACGCGGGATC AACAGTCCCT ACACGAGCTC CGCCGGACGT
CTGTTCGACG CCGCCGCCGC CCTGATCGGC GTCACGCTGA ATCAAAGCCA CGAAGGCCAG
GCCGGTATGC GGCTGGAAGC GCTGGCCGGC GACACGGCGG ATTTCATCGA ACTGCCGGCG
CGGCGTGAGA ACGGCCTGTA CCGCATCGAC TGGAGCCCTC TGCTGCCCGC TTTGATGGAC
GGGAGCCAAC CGGCCGGCTA CCGCAGCGCC CTGCTCCATG CCAGCCTGGC CCACGCGGTT
CTGGCCCAGG CCCGAGCGAT CCGCGGCGAA TCGGGCGTAA ACCTAGCCGG CCTCACCGGC
GGCGTGTTCC AGAACCGTAT TCTCGCCGAA CTGACCGCGA ATCTGCTGCG GGCCGACGGA
TTCGAAGTCG TCCTGCCCGC CAGCCTTCCT GTCAACGATG CCGCGATCGC CTACGGCCAG
CTCGTCGAGA CCGCCGGCGC CGGCCGGGCG CCCAGCCCCG CTTGA
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| Protein sequence | MRTAQRIQVR GRVQGVGFRP FVCRLAREFG LAGWVRNRGG GVEIHAEGDP AAIERLIDAL
VSRAPPLADP QPPVHRPAEF RGYAGFEILL SDSGDKTPIH VPPDHFVCPD CLDEMRDPAA
RRYRYPFINC TQCGPRYTLI DRLPYDRPNT AMADFPLCQD CRREYEDIHD RRYHAQPLAC
PLCGPVLEFR ELSACIAIPG NEPALSGCIE ALRQGQVVAV KGVGGYHLLC DARSDAAVGR
LRERKRRPDK PLAVLIPWFE GEGVDWLARL AEPRPDEREL LASPLRPIVI VQRSVDSDLS
GLIAPGLDEI GLMYPYSPLH HLLAGDYGAP LVATSANLSG EPVLTDGAEV ERQLAHVADA
FLHHDRPIRR PADDSVYRRS AGSMRPLRLG RGTAPLEMPL RYPVAEPTLA LGADLKNTIA
LAFEDRAVVS PHLGNLGAPR SLDVFGQLIR ELSALYGIAP KRVVCDAHPD YFSSRWARAC
GLEIHRVLHH HAHASALYGE FGPDGDILVF AWDGTGFGGD GTLWGGETLL GRPGGWRRVG
SLRPFRLIGG EKASAEPWRC ALAACWEAGL DWSGCPVDPA PYRHVWERGI NSPYTSSAGR
LFDAAAALIG VTLNQSHEGQ AGMRLEALAG DTADFIELPA RRENGLYRID WSPLLPALMD
GSQPAGYRSA LLHASLAHAV LAQARAIRGE SGVNLAGLTG GVFQNRILAE LTANLLRADG
FEVVLPASLP VNDAAIAYGQ LVETAGAGRA PSPA
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