| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DhcVS_1214 |
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| Symbol | hypF |
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| ID | 8658142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. VS |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013552 |
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| Strand | + |
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| Start bp | 1126514 |
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| End bp | 1128805 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | |
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| Product | hydrogenase maturation protein HypF |
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| Protein accession | YP_003330654 |
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| Protein GI | 270308596 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCAC CTAAGCAAAC CAAGCGGTTT GCCTTTGCCG TCAGCGGAAT TGTCCAGGGG
GTGGGCTTCC GCCCCTTTGT TTACCAGCTG GCCGCCAAAC ACGGCTTAAA CGGCTGGGTC
AGGAATACTT CTGCCGGAGT GGAGATAGAG GCGGAAGGAA TTGAACAAGC ACTGGACAGC
TTTTCTAAAG AGCTAATTAG CCTCAGCCCG CCCCAGTCAG TCATTAAGAC ATTTAAACAG
ACTGAAATAC CCATGACAGG TAAAGAAGGG TTTACCATCA AACCCAGCCA GAGCCTTTCC
GGCCGTTTTC AGCTGGTATC ACCGGATATA GCCACCTGCA CCCAGTGCCA AAATGATATT
CTTGACCCCC GAAACCGCCG CTACCGTTAT CCCTTTACCA ACTGCACCAA CTGCGGCCCC
CGTTTTACCA TCATTGAGGA CATACCCTAT GACAGACCCC TGACCACCAT GAAAGACTTT
GAAATGTGCC CGGCCTGCCA GGCCGAATAT GATAACCCTT TAGACCGCCG TTTCCATGCC
CAGCCCAATG CCTGCCCGGT GTGCGGCCCC CGCCTCTGGC TGGCGGATAA AACAAGAAAA
GAGCTTGAAA GTGCCGATAC CATAGCAGAA GCCGCAAAAC TGCTGAAAGA CGGCCGGATT
TTGGCCATAC GGGGTCTGGG GGGCTTTCTG CTGGCCGCTG ACGCCACTAA TCCGCCGGCG
GTTAATACCC TCCGACGCCG TAAACACCGC CCTTCCAAAC CCTTTGCGGT TATGCTTCCT
GATATAGCCG AAGCCCGCAA ACACTGTTTT ATATCCGCCG AAGAGGAAAA GCTGCTTATT
TCACCCGCCG CACCCATTGT CCTTTGCAAA TGGAACGGGG AAAGCCCCGT ATGCCCCGAA
ACCGCCCCCA AACAAAATTA TCTGGGCATA ATGCTGGCGT ACACACCTAT CCATCACCTG
CTTCTAAAGG AAACAGGTAA ACCCCTTATC ATGACCAGCG GCAACCTGAG CGAAGAGCCC
ATTGCCAAAG ACAATGACGA AGCCCTGAAA CGGCTGGGCA ATATAGCGGA TTATTTTCTG
CTTCACAACC GCCCCATTTA CTCCCGTTAT GATGACAGCG TGGTCATGTA TGAGGCCGGT
GCAAAAAGGG TAATCAGGCG GGGCAGGGGT TATGCCCCCT ACCCTGTCCA GACCTCTTTT
ACGGATAAAG AAATACTGGC GTTTGGTCCG CAGGAAAAGA ATACCTTCTG CCTGCTCAAA
GACGGTTATG CTTTTGTCAG CCAGCATATA GGGGATATGC AAAACCCCGA AACGCTGGAC
AGCTTTGAAG AAACCCTGTC GGTTTACCTG AAGCTATTCC GCTTAACCCC CCAAATAATG
GCTTCAGACC TGCACCCCGG TTATATTACC ACCGCTCTGG CTGAGGCACG CTCAGCCAGC
CTTGACATAC CTCTGGTCAA AGTCCAGCAC CACCATGCCC ATATTGCCTC CTGTCTGGCG
GAAAACAACT GTGATAATGA GGTTATCGGG GTGGCTCTGG ACGGCACCGG CTACGGGCTG
GACGGGCATA TCTGGGGCGG GGAATTTTTC TGCGGGGGCA TAAAACAGGG TCTTAGCCGC
CAAGCCCATC TGGAATACCT GCCTCTCCCC GGAGGCGAAG CCGCCATTAA AAAACCCTAC
CGCACAGCCG TGTCATATGT CTATACCCTG CTGGGGGAAG AGGGTTTGAA CTTTTTTAAA
GATATAGAGC CGGAAGAACT GGATATCATA AAAACCCAGC TTGACCGGAA ACTGAACTCA
CCCCTTACTT CCAGTGCGGG CAGGCTGTTT GATGCGGTTG CCGCCCTGTG CGGAATCTGC
CAAGTGGCAA ACTATGATTC CCAACCAGCC ATAGAGCTGG AAACCGAAGC CGGGGATACC
GAATTTGCCC AGTGCTACCC CTTTGAGTTA GACTTAGATA AGGGCATTTA CCTGATACGG
CTGAAGGGCA TAATCCAAGG CGTCCTTTCA GACCTTTCAT CAGGCAAAAC AGCCGCTTAT
ATATCGGTAA AATTTCACAA CACAGTCAGC CAGATAGTTC TGGACACCTG CCTAAGGCTT
TCAGCCCAAA GCGGTCTTAC CAAAGTAGCC CTTTCAGGCG GAGTTTTCCA GAACAGGCGG
CTTTTCCGCC AGGTGATAAA AAAGCTGGAA GCAGAGGGAT TTGAAGTGAT TACCCATAAA
GAAATCCCCT CTAATGACGG CTGCATATCA CTGGGTCAGG CGGTAATAGC CGCCAGCCAA
GGAGGAATAT AA
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| Protein sequence | MPAPKQTKRF AFAVSGIVQG VGFRPFVYQL AAKHGLNGWV RNTSAGVEIE AEGIEQALDS
FSKELISLSP PQSVIKTFKQ TEIPMTGKEG FTIKPSQSLS GRFQLVSPDI ATCTQCQNDI
LDPRNRRYRY PFTNCTNCGP RFTIIEDIPY DRPLTTMKDF EMCPACQAEY DNPLDRRFHA
QPNACPVCGP RLWLADKTRK ELESADTIAE AAKLLKDGRI LAIRGLGGFL LAADATNPPA
VNTLRRRKHR PSKPFAVMLP DIAEARKHCF ISAEEEKLLI SPAAPIVLCK WNGESPVCPE
TAPKQNYLGI MLAYTPIHHL LLKETGKPLI MTSGNLSEEP IAKDNDEALK RLGNIADYFL
LHNRPIYSRY DDSVVMYEAG AKRVIRRGRG YAPYPVQTSF TDKEILAFGP QEKNTFCLLK
DGYAFVSQHI GDMQNPETLD SFEETLSVYL KLFRLTPQIM ASDLHPGYIT TALAEARSAS
LDIPLVKVQH HHAHIASCLA ENNCDNEVIG VALDGTGYGL DGHIWGGEFF CGGIKQGLSR
QAHLEYLPLP GGEAAIKKPY RTAVSYVYTL LGEEGLNFFK DIEPEELDII KTQLDRKLNS
PLTSSAGRLF DAVAALCGIC QVANYDSQPA IELETEAGDT EFAQCYPFEL DLDKGIYLIR
LKGIIQGVLS DLSSGKTAAY ISVKFHNTVS QIVLDTCLRL SAQSGLTKVA LSGGVFQNRR
LFRQVIKKLE AEGFEVITHK EIPSNDGCIS LGQAVIAASQ GGI
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