Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0466 |
Symbol | |
ID | 7266634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 576115 |
End bp | 578451 |
Gene Length | 2337 bp |
Protein Length | 778 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643565329 |
Product | (NiFe) hydrogenase maturation protein HypF |
Protein accession | YP_002461843 |
Protein GI | 219847410 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0068] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.252806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0404368 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAAC AAACGATAAC CAACCCCCAG CAGCGGCGCT GGCGGATATA CGTGCGGGGC ATTGTACAGG GTGTTGGTTT TCGGCCCTTT GTGTTTGGGT TGGCCGAACG GTGGCAGTTG GCCGGTTTTG TCCGTAATGA TAGTTACGGG GTGACGATAG AGATCGAGGG TGAGGAGCGT GCCCTGCACG AGTTTGTGAC TGCACTGCAA CGCGAATCGC CGCCACTAGC CCGCATCGAG CAGGTGAGTA TCGAACCGTT GGCGTTGGTC GGTGAGCGCG CGTTTGTGAT TGCGGCCAGT CAAGCACAGG CCCAACGTCG CACGTTGATC GCACCGGATA CTGCTACCTG TGCTGATTGC CTGCGCGAGA TCACCGATCC CGCCGACCGG CGCTATCGTT ATGCCTTTAC CAACTGCACC AACTGTGGCC CCCGCTTTAC GATTGTGCTC GATGTGCCCT ACGACCGCGC CAATACCACG ATGCGCAGCT TTGTGCTCTG CGAACGGTGT CGAGCCGAGT ACGAAGATCC GCGCGATCGC CGTTTTCATG CCCAGCCGAC GGCTTGCCCG GTGTGCGGTC CGCAGTTGCA ATGGCTGACT GCCGATGGTG TGTTGGCCGA ACCCGATCCG TTGCGCGCTG CGGCGGTAGC GCTGGCGCAA GGGCAGATCG TAGCGGTGAA GGGGCTTGGC GGCTACCATC TCGCCTGCGC CGCCGATGAT GAAGCGGCGG TGCGTCGGTT GCGTCAACGC AAGCAGCGCG AAGCGCGGCC ATTGGCCTTG ATGACCCGCG ATCTCACCGT CGCTGCTCGA CTGTGTGTGA TCGATCCGGT TGCACAAACA TTGCTGACCG GTCCGGCTCA CCCGATTGTG CTGATGCCGC GGCGCTCTGA TGCACCGGTT GCGCCGTCGG TGGCGCCGGG AATGCGGACG CTAGGCGTCA TGCTACCGTA TACGCCACTT CACCACCTGC TATTGGCCGA ATATGCCGCC GTCGTCGGGC CAACACGAGA AGCGGTGATT GTGCTGACGA GCGGTAATCT GAGTGATGAG CCGATTGCCT ACCACGACGA TGATGCGCAG CAACGGCTAG GGCCGATTGC CGATGCCTTT CTCACCCACA ACCGTCCCAT CCATATGCGC TGCGATGATA GTGTAGCCAG TGTTGCTGTC GGTGGACCGC TCCTGATCCG GCGGTCACGC GGGTATGCCC CGGCTCCGAT TACCCTGGCT GCTGAGTTGC CATGCCCGAT CCTTGCCTGT GGCGGCCATC TCAAAAACAC GTTTGCCCTT GGTCGTGGTC GCGAAGTATT TCTCAGTCAT CACATCGGTG ATCTAGAAAA TCTGCCGACA TTGCGCTCAT TTCACGAGGG GATTGCCCAT TTTCAACGGC TGTTTGACAT CACGCCGGAA GTCGTCGCGT ATGACCTGCA TCCCGGCTAT CTGGCTACCC AAGCTGCGCT GGCAATGCCG ATCGAGCGCA AGATCGGTGT ACAGCACCAC CATGCCCACA TTGCGGCAGT GTTGGCCGAA TATGGCCATC CCGGACCGGT GATCGGGGTA GCCGCCGATG GCAGCGGCTA CGGGCCTGAT GGGACGGTGT GGGGCGGTGA AGTGCTGGTA GCGACGTGTG CTTCTTACGA GCGAGTAGGT CATCTGGGTC ATCTGATTCT ACCCGGCGGC GAGCAGGCAG TGCGCCAGCC GTGGCGGGTG GCGGCGGCGG CGCTAGCTCA GCTCTACGGC CCTGATTTCT GGCGGCTGGC ATTGCCGTTT ACCCAACAGC TCGATCAGTC AGCATGGCAG GTACTGGCCC GGATGATTGA ACGGAACCTC AATAGTCCAC GCACCTCAAG TCTTGGCCGG CTGTTCGATG CCGCCGCCGC ACTAACCGGA ATGGGCCAGA TTGCCCGTTA CGAAGGCGAG CTGGCCATTC GCTTCGAGCA GATTGCCGAT CCGCAGCAGC CGCCCTATCC CATGCCGCTG CGTGAGCCAG CCACTGCCGG CGGGCCGTTC ACGCTCGACG GATTGGCATT GCTGGCGGCG CTGGTTGATG ATCTGCGGGC CGGGGTTGCA CCGGCAGCAA TCGCGGGCCG GGTGCATCAC GGTGTGGCTC GGGCGCTCTT GGCTGCTTGC CGGCGTGTCC GTGAGGAGCG TGGCCTGACC ATCGTTGCGC TCAGTGGTGG AGTCTTTCAA AATGTGCTGC TGCTGGAGAC GCTGGCCGGT GCGCTGCAAG CCGATGGGTT TACCGTATTG ATCCCACGGC TTGCCCCGCC AAACGATGGT GGGTTGGCGC TGGGTCAGGT GGCGGTGGCC GGTGCGCAGG TCGGCGAGCG GCAATAG
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Protein sequence | MTEQTITNPQ QRRWRIYVRG IVQGVGFRPF VFGLAERWQL AGFVRNDSYG VTIEIEGEER ALHEFVTALQ RESPPLARIE QVSIEPLALV GERAFVIAAS QAQAQRRTLI APDTATCADC LREITDPADR RYRYAFTNCT NCGPRFTIVL DVPYDRANTT MRSFVLCERC RAEYEDPRDR RFHAQPTACP VCGPQLQWLT ADGVLAEPDP LRAAAVALAQ GQIVAVKGLG GYHLACAADD EAAVRRLRQR KQREARPLAL MTRDLTVAAR LCVIDPVAQT LLTGPAHPIV LMPRRSDAPV APSVAPGMRT LGVMLPYTPL HHLLLAEYAA VVGPTREAVI VLTSGNLSDE PIAYHDDDAQ QRLGPIADAF LTHNRPIHMR CDDSVASVAV GGPLLIRRSR GYAPAPITLA AELPCPILAC GGHLKNTFAL GRGREVFLSH HIGDLENLPT LRSFHEGIAH FQRLFDITPE VVAYDLHPGY LATQAALAMP IERKIGVQHH HAHIAAVLAE YGHPGPVIGV AADGSGYGPD GTVWGGEVLV ATCASYERVG HLGHLILPGG EQAVRQPWRV AAAALAQLYG PDFWRLALPF TQQLDQSAWQ VLARMIERNL NSPRTSSLGR LFDAAAALTG MGQIARYEGE LAIRFEQIAD PQQPPYPMPL REPATAGGPF TLDGLALLAA LVDDLRAGVA PAAIAGRVHH GVARALLAAC RRVREERGLT IVALSGGVFQ NVLLLETLAG ALQADGFTVL IPRLAPPNDG GLALGQVAVA GAQVGERQ
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