| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2094 |
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| Symbol | hypF |
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| ID | 1169838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 2189500 |
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| End bp | 2191926 |
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| Gene Length | 2427 bp |
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| Protein Length | 808 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637343960 |
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| Product | hydrogenase maturation protein HypF |
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| Protein accession | NP_717697 |
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| Protein GI | 24373654 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAAC GTCGCCAACT GCATATCACT GGCATAGTAC AAGGTGTGGG CTTTCGGCCG
TTTGTCTACC GCTGGGCAAC CGAGCTGCAA CTCACTGGCA CAGTACTCAA TAATGCCAAG
GGCGTGATGA TAGAACTGCA AGGGCCGAGC GCAAGACTGG ATATTTTTAT CCAAGAGTTA
GCAACTAACC CGCCACCACT GGCACGTATC GACCATATTA GCCATGGACA GCTAGCGATA
AAATTAGCAG AGACACACTT CGAGATTGTT CAAAGCGATA GCCAAAGTGA TGGTACAAAA
GACCGGAGCT TAGCAGCACT CGTTGCCGTG TCGGCCGACA AGAGTACCTG TCAGGATTGC
CTCGACGATA TGCACAATCC ACAGGATCGC CACTTTGGCT ATGCCTTTAC TAATTGCACC
AACTGTGGCC CAAGATACTC GATTATCAAT GCCTTACCCT ATGATCGCCA TCATACCGCC
ATGGCGGATT TCGCTATGTG CCCCGATTGC GCCAAGGCCT ATCAAGATCC ATTAAATCGA
AGGTACCACG CTCAGCCCGT CAGTTGCCCC AAATGTGGCC CACAGCTGAG TTTAAAAACG
CCTAAGGGTG AATTAATCGC ACTGACGCCC TCACTCAACT CGCAAGACAA CAGCATGGCG
GTATTGTCCG CCGCGGCCAA TATGCTTGCA CAAGGACACA TCCTCGCCAT AAAAGGGCTC
GGTGGATTCC ACTTGATGTG TGACGCGAGA AACAGCCACG CAGTGAGTCA ACTACGGCAG
CGAAAACAGC GTAAGGCGAA GCCGCTGGCG GTAATGATGC CGAGTATTGA AATGGCAAAA
CAGTACGTTA CGGGCACGGA GGCGGAGTGG CAAACCTTAA GCTCGCCGGA ACGGCCCATC
GTATTGATGC AAGCGTTGGA TGAGCATGAC CTTAACCCCG AAATCGCACC CAATATCCCC
AAGCTGGGCG TATTTTTACC TTATACGCCA CTGCACCACT TACTGCTTAG CCAATTTAAT
GGCCCGCTAG TGGCAACCAG CGCCAATGTG TCGGGCGAGC CCATTATCAC CGATTGCGAT
GCGCTTATCA GCCAACTTGG GCATGTGGTG GATGCCATCG TCGATCATAA CAGACCGATA
CTCAACGGCT GTGATGACAG TGTTGTGCAA CTTATTCAAC AGCCAAATGG CAGTACGCCG
CAGGTGCAAG TGCTGCGTCT AGCGCGGGGT TATGCGCCAT TAAGTTTTCC ATTAACTGCG
CCACTAACAC GCTCAATCCT CGCCGTGGGA GCACAGCAAA AAAATGCTAT CGCTTTCGGA
TTTGGTGCAA ATGTGTTTTT AAGTCCACAT ATTGGCGATC TTTTTAGTGT CAGTGCCGAG
CAGTATTTCG AGCGCACCTT AGCGACCTTC GCCCGCCTGT ATCATTTCAG TCCCGAGCTG
ATTGTGCACG ATAAGCACCC AGACTATGCG CCATCGCGCT GGGCAGAGGC GCAGCAACAG
AAAAGCCCTG ATACACAGAG TGGAACCTCT GGTTCAATCC AAACCTTAAG CGTGCAACAT
CACCATGCGC ATGTACTCAG TGTCATGGCC ATCAATCAAT ATCAAGAGCC CGTATTAGGT
TTTAGTTTTG ACGGTACCGG CCTTGGTGAT GATGGCAGTC TCTGGGGCGG TGAAGTGTTA
TTGACCAGGT TAGACAAAGC AGAGCGCTTA GCCCATTTTG AAGCCATCTC CCTACTGGGC
GGTGAGCAAG CAATAAAACA GCCTGTGCGA TTATTACTGG CACTGCTGTT TGAACAAATG
AGTTTAGCGG CGGTACAAGC CTTAGATTTG CCGATCCTAA AAAGCCTGAC ACCCATAACT
TTAAGTAATT TGCATCGGAT CTGGCAAAAT GGCCATACGA TTAAAAGCTC ATCGGTTGGC
CGATTATTTG ATGCCCTCGC CTGCGCTTTA GGATTGATTG ATACCACACA ATTTGAAGGC
CAAGCGGGTA TGCTGATAGA AGCCGCAGCA AGACGCGCCG ATAAACAACA TCTACCGTCA
CTGATCCTCG ATTTGCCGCT CTGTTCATCA GAGGATGACC CGCGACAAGT GCAAGTTTGG
TGTAGTAGCC AACTGTTTAA ACAGCTTATC GTGCACATCA CTGAGGCGCC ACTTTCCTCC
CACAGGCAAA GCATTATCGC CCGCGCGTTT TTGCATAGTC TTGGGGATGC TATTTGTAGT
TATGCCGCGC GCTATCCATC ACTGCCCATT GCGCTATGTG GCGGAGTATT TCAAAACCAA
TATCTGCTCG AATATTGCCT CAGTAAACTT CATCTGCAAG GCAACATCGT GCTCCCCAAC
AAACATATCC CCGTTAACGA TGGCGGTATC GCTCTTGGCC AGCTTTGGTA TGGAATTCAT
CAAGAGGCAA ATGCTGAGCT GAGCTAA
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| Protein sequence | MIERRQLHIT GIVQGVGFRP FVYRWATELQ LTGTVLNNAK GVMIELQGPS ARLDIFIQEL
ATNPPPLARI DHISHGQLAI KLAETHFEIV QSDSQSDGTK DRSLAALVAV SADKSTCQDC
LDDMHNPQDR HFGYAFTNCT NCGPRYSIIN ALPYDRHHTA MADFAMCPDC AKAYQDPLNR
RYHAQPVSCP KCGPQLSLKT PKGELIALTP SLNSQDNSMA VLSAAANMLA QGHILAIKGL
GGFHLMCDAR NSHAVSQLRQ RKQRKAKPLA VMMPSIEMAK QYVTGTEAEW QTLSSPERPI
VLMQALDEHD LNPEIAPNIP KLGVFLPYTP LHHLLLSQFN GPLVATSANV SGEPIITDCD
ALISQLGHVV DAIVDHNRPI LNGCDDSVVQ LIQQPNGSTP QVQVLRLARG YAPLSFPLTA
PLTRSILAVG AQQKNAIAFG FGANVFLSPH IGDLFSVSAE QYFERTLATF ARLYHFSPEL
IVHDKHPDYA PSRWAEAQQQ KSPDTQSGTS GSIQTLSVQH HHAHVLSVMA INQYQEPVLG
FSFDGTGLGD DGSLWGGEVL LTRLDKAERL AHFEAISLLG GEQAIKQPVR LLLALLFEQM
SLAAVQALDL PILKSLTPIT LSNLHRIWQN GHTIKSSSVG RLFDALACAL GLIDTTQFEG
QAGMLIEAAA RRADKQHLPS LILDLPLCSS EDDPRQVQVW CSSQLFKQLI VHITEAPLSS
HRQSIIARAF LHSLGDAICS YAARYPSLPI ALCGGVFQNQ YLLEYCLSKL HLQGNIVLPN
KHIPVNDGGI ALGQLWYGIH QEANAELS
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