| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_2028 |
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| Symbol | |
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| ID | 5662421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 2452552 |
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| End bp | 2454954 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641236623 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_001501883 |
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| Protein GI | 157961849 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAGA ATCTGACTAA AAGTCGTTTA TGTGTAAAGA TCACCGGCAT CGTTCAAGGT
GTCGGTTTTC GTCCCTATGT TTACCGTTTA GCTCAGGAGT TAAATCTTAC TGGTAGCGTA
CTTAATAACA GTAAAGGAGT CACCATTGAG GTTCAGGGGC ACGCTGTTGC CCTCGCCAAG
TTTGAAAGCG CCCTTAGAGA TCAACCGCCT CCCCTCGCTC GTATTGATAG TGTTAGTGCC
ACTAGTGTGC CAATTATTGA CGGCTGTAAT GTCTTTGAGA TCATACATAG TAAAAAAGAT
TGCCAAGCCG TAGTCGCAGT ATCATCCGAT AAATGCACCT GTAGCGATTG CTTTGATGAC
ATAAGAGACC CAAATAACCG CCATTTCAGA TACCCGTTCA CCAATTGTAC AAATTGTGGC
CCAAGGTATT CGCTGATCAA TGCGCTGCCC TACGATAGAC CCAACACAGC TATGGCTAGT
TTTTCCATGT GCCCTGATTG TGAACGGGCG TATTTAGACC CAATGGACAG ACGATACCAC
GCCCAACCAG TGAGTTGTCC TAGGTGTGGT CCTCAGTTAA GTTTCAAACA AGCCGACCTT
AGTGAGTTAA GCGTTAAAGC TGATGCACTA GAGAGTGCGA TCAACGCATT AATTGAGGGG
AAAATATTAG CTATTAAGGG CATTGGAGGC TTTCATTTAG TCTGTGATGC CACTAACGAT
CAAAGCGTTG AGCGCTTAAG ACAGCGAAAA TGTCGCCCAG CAAAACCTTT TGCCGTCATG
GTTGAAAATA TCGAAGCCGC TGCGAAATTA GTGAGTGGCA GCCAAGCAGA GTGGTCAACT
TTAAGCAGTG CCGAGCGCCC TATTACACTG ATGCGTAAAG TGACGGCACT CGATGCTCAT
ACAAAATTCG CCTCTGATTC TGATTTCAAT ACTAATGCTC AACCTAATGC CCAAAAAGGC
TCAACATTAG AGCTGAGTGA CTTAGTTGCC CCAGAGATAG ACAGACTCGG TATATTTCTG
CCATATACGC CTTTACATCA ACTGTTACTC AGCGGCGTTA AGCGACCTTT AGTCATGACC
AGTGCTAACT TAGCGGGTGA GCCTATCATC ACTGATAGCC AAACCATCAA GACTAAACTG
GCCCATGTGA TCGACAATAT TCTCGATCAC GATCGGCCTA TTTTGAATGG TTGCGATGAC
AGTGTTGTTC AGCTGATCAA CGATAAATTG CAGGTTCTAC GCTTAGCCAG AGGCTATGCA
CCACTTTCTG TATATAGCGA AGCCCCCCTC TCAGAGAGCA TTCTTGCTCT CGGTGCCCAG
CAAAAAAACA GCATCTGTTT TGGATTTGAT CATAACCTAT TTGTCAGTCC TCATATTGGT
GATCTGCTAT CTATCGAAGC CGAGGAATAT TTTCACCATA CACTGAATAC ATTCTCAAGA
TTATATGGAT TTAGTGCCGA CCGACTGGTT CATGACAGTC ATCCAGATTA CACCACCAGT
CGGTGGGCTT TAGCCCAAAA TGTGGCTAAC ACAAGCTCGG TTCAACATCA CTTCGCCCAT
GTACTGAGTG TCATGGCCGT AAATAAGGTG ACCACTCCAG TCCTTGGCTT TAGCTTCGAT
GGCACAGGTT TAGGTGATGA CACAACATTA TGGGGGGGAG AAGCGCTTTA CTGTGACGTA
AACCAATATC GGCGTATCGC TCATCTTAAA AACTTTGCAC TTATTGGCGG CGAGCAAGCA
ATCAAGCAGC CTACTAGGCT CTTGCTCGCT ATCTTGCTTG AAAAGTATTC ACCACAAGAA
ATTAAAGATC TTAACCTTGC AGCGTTTAAC AGGCTTTCAC CGATGATGTT TAACAACCTT
GTTAAACTTT GGCAGTCTGA CAACTGCATC AAGACCTCAT CAATTGGTAG ATTGTTTGAT
GCTGTCGCGG TTGTTCTTGG ACTAATCAAT GAAACTGTCT ATGAAGGACA AGCTGGGATC
TTGATTGAAA CAGCAGCCAA TAGCCTAGAG AACCAAGTTA AGCTGAAAAA TATTGATAGC
AAACAAACCA TTCAATTTAA TATAGAACGG GTTAATTCCC AGTGGGATAG CTCAGAGCTG
TTACACCAGA TTATAGAGCG AGTAACTGAA GCCCCACTAA GCCAATATCG CATTGCGCAA
ATCGCTAAAG CGTTTATGGA CGCTTTGAGC AATATGTTAT GTGAGTGTGC TAAAGACTAC
CTCGATACCC CAATCGTACT TTGCGGCGGC GTATTTCAAA ATCGTTATCT ACTCGAGCGG
TGTGAAAAAC AATTGAGTGC CCAAGGGAAT CGCCTGCTTT CAAGTGAAAA AGTACCAATA
AATGATGCAG GTATTGCCCT AGGTCAGCTT TGGTACGCAA TGCATAACAG TACACATGTG
TGA
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| Protein sequence | MTKNLTKSRL CVKITGIVQG VGFRPYVYRL AQELNLTGSV LNNSKGVTIE VQGHAVALAK
FESALRDQPP PLARIDSVSA TSVPIIDGCN VFEIIHSKKD CQAVVAVSSD KCTCSDCFDD
IRDPNNRHFR YPFTNCTNCG PRYSLINALP YDRPNTAMAS FSMCPDCERA YLDPMDRRYH
AQPVSCPRCG PQLSFKQADL SELSVKADAL ESAINALIEG KILAIKGIGG FHLVCDATND
QSVERLRQRK CRPAKPFAVM VENIEAAAKL VSGSQAEWST LSSAERPITL MRKVTALDAH
TKFASDSDFN TNAQPNAQKG STLELSDLVA PEIDRLGIFL PYTPLHQLLL SGVKRPLVMT
SANLAGEPII TDSQTIKTKL AHVIDNILDH DRPILNGCDD SVVQLINDKL QVLRLARGYA
PLSVYSEAPL SESILALGAQ QKNSICFGFD HNLFVSPHIG DLLSIEAEEY FHHTLNTFSR
LYGFSADRLV HDSHPDYTTS RWALAQNVAN TSSVQHHFAH VLSVMAVNKV TTPVLGFSFD
GTGLGDDTTL WGGEALYCDV NQYRRIAHLK NFALIGGEQA IKQPTRLLLA ILLEKYSPQE
IKDLNLAAFN RLSPMMFNNL VKLWQSDNCI KTSSIGRLFD AVAVVLGLIN ETVYEGQAGI
LIETAANSLE NQVKLKNIDS KQTIQFNIER VNSQWDSSEL LHQIIERVTE APLSQYRIAQ
IAKAFMDALS NMLCECAKDY LDTPIVLCGG VFQNRYLLER CEKQLSAQGN RLLSSEKVPI
NDAGIALGQL WYAMHNSTHV
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