Gene Rmar_2593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_2593 
Symbol 
ID8569261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp3011294 
End bp3013615 
Gene Length2322 bp 
Protein Length773 aa 
Translation table11 
GC content69% 
IMG OID 
Product(NiFe) hydrogenase maturation protein HypF 
Protein accessionYP_003291854 
Protein GI268318135 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCACCG CAACCGAACA CCTGACGCGC TGGCGCCTGC ACGTCGAGGG TGCCGTGCAG 
GGTGTCGGCT TCCGGCCGTT CGTTTACCGG CTGGCCCACG AGCTGGGCCT GAACGGTGAG
GTGCGCAACG ATCCTGCCGG CGTGACCATA GAGATCGAGG GCGATCCGGA GCGCCTGGCC
TGCTTCCGGG AACGTCTGGA GCAACAACCT CCGCCGGCCG CCCGCATCCG ACGCATCACC
TGCACGGAAC TGCCGCCCTG CGGCTACCGC ACCTTCACCA TCGCCGCCAG TCGCCCTGAA
GGCGAGCGTC AGGTGTTTCT ACTGCCGGAT CTGGCCACCT GTCCCGATTG CCTGCGCGAG
CTGTTCGACC CGAACGACCG CCGCTATCGC TACCCGTTCA TCAACTGCAC CAACTGCGGC
CCGCGCTTTA CGATCATCGA GCGACTTCCC TACGACCGCC CCAATACCAC GATGCGGCAC
TTCCGGATGT GCGCGCGCTG CCGGGCCGAA TACGAGGATC CGCTGAACCG ACGTTTCCAC
GCACAGCCAA ACGCCTGTCC CGACTGCGGT CCGCATCTGG CACTCTGGGA TCGAAAAGGC
AACGTGCTGG CCGAGCGGGA CGAGGCGCTG CGCCGGGCGG CCGAGGCAAT CTGCGAGGGA
CGGATCGTAG CGGTTAAAGG ACTGGGCGGC TTTCATCTGA TCGTCGATGC CCGCAACGAG
GCGGCTGTTC GGGTGCTCCG GTTGCGCAAG GGACGCGAAG CCAAGCCGTT CGCCCTGATG
TATCCGTCGC TGGCGGCGGT CCGGGCGCAC GCCTGCGTCT CGGAGGCCGA AGCGGCCCTG
CTGACGTCAC CCGCGGCGCC CATCGTGTTG CTGCGCCGCA CCGCAGCGGG TCGGGAGGCG
CTGGCCCCGT CGGTGGCGCC CGGCAATCCG TATCTGGGCA TCATGCTGCC CTACACGCCG
CTGCACCATC TGCTGCTGAC CGAACTGGGC TTTCCGGTGG TGGCCACCAG CGGCAACCGC
TCGGAGGAAC CCATCTGCAT CGACGAGCGC GAAGCGCTGG TGCGGCTGCG CGACCTGGCC
GATCTGTTTC TGGTGCACAA CCGGCCGATC GCCCGCTACT GCGACGACTC GGTGGTGCGC
TTCATCGACG GCCACCCGGT CTTCCTGCGA CGTGCCCGCG GCTATGCGCC CCTGCCGGTG
GAGCTGGCCG ACGACTGGCC CGCCCATCCC GAGCAGGTGC TGGCCGTGGG CGGCCATCTG
AAAAACACGG TGGCACTGGC TTCGGGCCGG ACGGTCTGGA TCAGCCAGCA CATCGGCGAC
CTGGAGACGG CCGAAGCCCG CGCGGCCTTC GTGCGCGTGA TCGACGACTT CACGCGCCTG
TACGAGCGCA CGCCCGACGC GGTAGCCTGC GACGCCCACC CCGACTACGC CTCCACGCAC
CATGCACACC GGCTGGGTCG GCCGGTCGCG CCGGTGCAAC ACCACCTGGC GCACGTATGG
GCCTGCATGG CCGAGCACGG GCTACGACCG CCCGTGCTCG GCTTCGGCTG GGACGGCACG
GGCTACGGCC CCGACGGCGC GGTGTGGGGC GGCGAATGCT TTCTGGTGAC GGCGGAACGC
GCCGTGCGGA TCGCGCACCT GCGGCCGTTT CGGCTGCCGG GTGGCGAGGC GGCCGTGCGC
GAGCCCCGAC GGACGGCGCT GGGCCTGCTC CACGCCTGGA AGGGCGAGGC GGCGCTCATG
CACCTGCCGT CCGGCGCTTT TACCGAAACC GAAGCCCGGC TCCTGCTGCA GATGGTGACG
CGCGGCCTGA ACGCGCCCTG GACCACCAGT ATCGGACGGC TCTTCGACGC GGTAGCCGCC
CTGCTCGGCC TGTGCCTGCG CAATCGGTTC GAGGGCGAGG CGGCCATGCT GCTGGAGTTT
GCCGCCGAGG AAGCCGAGGC GTCCGGCCCG CCCTATCCGC TGGCGCTTCA GGAGCAGGAC
GGCCGGCTGG TGCTCGACTG GGCTCCGCTG CTCGAAGCGC TCGAGGCCGA CCGCGTGCAG
GGACTCTCTC CGATGGTCAT TGCGCGGCGC TTCCACGAAG GACTGGCGAC CGCCATCGTA
ACGATAGCCC GGCGTATCGG CTGCCCGACC GTCGTGCTCA GCGGCGGCTG CTTCCAGAAC
CGCCTGCTCA CCGAAACGTC GCTCCGGCTA CTTCGTGCGG CCGGATTTCG CCCGTATATT
CACCGACAGG TGCCCCCCGG CGACGGTGGC CTGGCGCTGG GACAGGTGGC CGCGCTCCGC
TGGGGCCTGA CCATGCCCGC TCTCGTCAAC CATTCATGCT GA
 
Protein sequence
MRTATEHLTR WRLHVEGAVQ GVGFRPFVYR LAHELGLNGE VRNDPAGVTI EIEGDPERLA 
CFRERLEQQP PPAARIRRIT CTELPPCGYR TFTIAASRPE GERQVFLLPD LATCPDCLRE
LFDPNDRRYR YPFINCTNCG PRFTIIERLP YDRPNTTMRH FRMCARCRAE YEDPLNRRFH
AQPNACPDCG PHLALWDRKG NVLAERDEAL RRAAEAICEG RIVAVKGLGG FHLIVDARNE
AAVRVLRLRK GREAKPFALM YPSLAAVRAH ACVSEAEAAL LTSPAAPIVL LRRTAAGREA
LAPSVAPGNP YLGIMLPYTP LHHLLLTELG FPVVATSGNR SEEPICIDER EALVRLRDLA
DLFLVHNRPI ARYCDDSVVR FIDGHPVFLR RARGYAPLPV ELADDWPAHP EQVLAVGGHL
KNTVALASGR TVWISQHIGD LETAEARAAF VRVIDDFTRL YERTPDAVAC DAHPDYASTH
HAHRLGRPVA PVQHHLAHVW ACMAEHGLRP PVLGFGWDGT GYGPDGAVWG GECFLVTAER
AVRIAHLRPF RLPGGEAAVR EPRRTALGLL HAWKGEAALM HLPSGAFTET EARLLLQMVT
RGLNAPWTTS IGRLFDAVAA LLGLCLRNRF EGEAAMLLEF AAEEAEASGP PYPLALQEQD
GRLVLDWAPL LEALEADRVQ GLSPMVIARR FHEGLATAIV TIARRIGCPT VVLSGGCFQN
RLLTETSLRL LRAAGFRPYI HRQVPPGDGG LALGQVAALR WGLTMPALVN HSC