| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0860 |
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| Symbol | |
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| ID | 6876825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 816869 |
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| End bp | 819280 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642788742 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_002219317 |
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| Protein GI | 198282996 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.729638 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCCC CCGCGGACCG GGTCGCAACC CTGGGCGAGG AAGTCCGGGT GCGCGGACTG
GTTCAGGGCG TTGGGTTCCG TCCTGCGGTT TGGCGCATTG CCCGCGACTG CGGGTTGTCG
GGCGATGTGT GCAACGATGG AGAAGGGGTG CTGATCCGGA TCTGGGGGCC TGCAACGGAG
CGGGATCGAT TTTTGACCCG CCTGCGCGAC GAACACCCCC CCCTCGCGCG CATTGACGAG
GTGGTCCGCG GATCTTTGCG CGAAGACCCT CCTGAGGGAC CTTTCGGGAT CAGTACCAGC
CGCTCCGGGC ACGTACATAC GGGAGCGGTG CCGGACGCCG CTACCTGTCC CGCCTGCCTG
GGGGAGATTT TCGACCCCTT CCATCGGCGT TATCGTTACC CTTTCACCAA TTGCACGCAC
TGTGGTCCGC GTTTTTCGAT CCTCGAAGAC ATCCCCTATG ACCGCGCCCA TACCTCCATG
GGCGTCTTTC CGCTCTGCAG GGATTGCCGT GCCGAATACG AAAATCCGGA AGACCGGCGC
TTCCACGCGC AACCGGTGGC CTGCCATGCC TGCGGCCCGA AGGCCCGGCT CGTCCGGCTC
GATGGCCACG CGGTCAGTGC CGACCGGTAT ACCCAACTGG ACGCGGTGGA CGCGGCGACC
AACCTCCTCA AGTGTGGGGA AATCGTGCTC ATCAAAGGGC TCGGCGGTTT TCATCTCGCC
TGCGATGCCA CGAATGACCG TGCGGTGTCC GGCTTGCGCC TGCGCAAACA CCGTCCCCAT
AAGCCCCTGG CGTTGATGGC CAGGGATCTG GAGGTCGTGC GTCGCTATGC GCACGTGAGC
CGCGCAGAGG AGAAGTTGCT GCAGTCTCAT CAGGCGCCCA TCGTGCTGCT GAACCGTCTG
GACAACGACT CCCTGGCGCC CGGCATTGCG CCGGGGATGC GGCGGCTCGG GTTTATGCTG
CCTTATACCC CCCTGCACCA TCTCCTGATG CGCCGGATGG ACCGACCGAT CGTCCTGACG
AGCGGCAATC TCTCGGATGC TCCACAGGTC ACTGACGACG CGGCCGCCGT CCGGGCGCTG
CGGGGAGTGA CCGACTGGAT GCTGACCCAT GACCGGGCGA TCATCAACCG CGTCGATGAT
TCTGTGGTGC AGATGGCGGG AGACGACACC ATGATTCTGC GCCGGGGGCG TGGCTACGCG
CCGGAGTCGT TGCCGCTGCC CGCGGGTTTC GGAGCGTCGC CGGACCTGCT GGCGCTGGGT
GGGGAGCTCA AGAACACCTT CTGTCTGATC AAGGACGGAC AAGCCATCCT TTCCCAGCAC
ATGGGCGATC TCGAACAGGC CGCGGTCTGG GACGACACTG TCCGGAATCT CGCCCTCTAC
GCCCGGCTCT TCCAGCATGT GCCCAAGGCC GTCGTGGTGG ACCGCCATCC CGAATATCTG
TCGCGCAAGT GGGGGGTGGA GATGGCGGAG GAGGGCGATC TCCCCCTGAT TTCCGTGCAA
CACCATCACG CCCATATTGC CGCGGTCATG GCGGAACATG GCCTGCCGCT GGAACATCCG
CCGGTCATCG CCCTGGCTCT GGACGGTATG GGTCTGGGCG ATGGGGGCGC TTGGTGGGGT
TGTGAGTGCT TGCAGGTGAG TTACCGCGAA GTTCGCCACC TGGGTGGGTT GCGCCCTTCC
GCCCTGCCGG GGGGTGGTCT CGCGATGCGT GAACCGTGGC GCAACGCCTT TGTACAGCTT
GCGGACGCCT TCGGCTGGTC CGTGGCACGC CAACGATTCG CCGATCTGGC CATCGTGGAA
TACCTTGTCG AAAAGCCGGT CGCACAGTTG TTGCACATGC GGGACAGGAA TATCTGCACG
CCGCTCTGCA GTTCTGCCGG GCGGCTGTTT GACGCCGTCA GCGCGGTCTG TGGCCTGTGC
ATGGACCGGG TGAGTCATGA AGGGCAGGCG GCCATGCTGC TGGAGGCATG CGTCGATCCG
TCTATCATGG GGGACGCCTC GGAGCCGGGC TATCCTTTCG GCATCGCCGA AAGCGAAAAG
GGCTTCATTC AAATGGATCC GCGAACCCTG TGGCAGCCTC TGCTGGGCGA TCTCCAGGGC
GGGGTTCCGG TGGCGACCGT TGCCGCGCGC TTCCACAAAG GCTTCGCCGC CGGCTTGGCG
CAGTTGCTCA GGGAGGCCCT GGGTGCTACG CCCTGGACGT CCACCGTCGC TTTATCCGGG
GGTGTTTTTC AGAATCTGAC CCTGCTGCGG GCAACCCGGG AGGCTCTGGA ATCCCAGGGG
CTGGAGGTTC TCATTCCGCA TCTGATCCCC GCCAATGACG GCGGCCTGGC TTTTGGGCAG
GCTGTGGTGG CGGCCGCTCA AATCGTCGCT GGTCAACATC CTATTGCAGG AGGGCATGAG
CCATGTGTCT AG
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| Protein sequence | MNSPADRVAT LGEEVRVRGL VQGVGFRPAV WRIARDCGLS GDVCNDGEGV LIRIWGPATE
RDRFLTRLRD EHPPLARIDE VVRGSLREDP PEGPFGISTS RSGHVHTGAV PDAATCPACL
GEIFDPFHRR YRYPFTNCTH CGPRFSILED IPYDRAHTSM GVFPLCRDCR AEYENPEDRR
FHAQPVACHA CGPKARLVRL DGHAVSADRY TQLDAVDAAT NLLKCGEIVL IKGLGGFHLA
CDATNDRAVS GLRLRKHRPH KPLALMARDL EVVRRYAHVS RAEEKLLQSH QAPIVLLNRL
DNDSLAPGIA PGMRRLGFML PYTPLHHLLM RRMDRPIVLT SGNLSDAPQV TDDAAAVRAL
RGVTDWMLTH DRAIINRVDD SVVQMAGDDT MILRRGRGYA PESLPLPAGF GASPDLLALG
GELKNTFCLI KDGQAILSQH MGDLEQAAVW DDTVRNLALY ARLFQHVPKA VVVDRHPEYL
SRKWGVEMAE EGDLPLISVQ HHHAHIAAVM AEHGLPLEHP PVIALALDGM GLGDGGAWWG
CECLQVSYRE VRHLGGLRPS ALPGGGLAMR EPWRNAFVQL ADAFGWSVAR QRFADLAIVE
YLVEKPVAQL LHMRDRNICT PLCSSAGRLF DAVSAVCGLC MDRVSHEGQA AMLLEACVDP
SIMGDASEPG YPFGIAESEK GFIQMDPRTL WQPLLGDLQG GVPVATVAAR FHKGFAAGLA
QLLREALGAT PWTSTVALSG GVFQNLTLLR ATREALESQG LEVLIPHLIP ANDGGLAFGQ
AVVAAAQIVA GQHPIAGGHE PCV
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