| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dbac_1787 |
|---|
| Symbol | |
|---|
| ID | 8377459 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfomicrobium baculatum DSM 4028 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013173 |
|---|
| Strand | + |
|---|
| Start bp | 2033936 |
|---|
| End bp | 2036236 |
|---|
| Gene Length | 2301 bp |
|---|
| Protein Length | 766 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 645001015 |
|---|
| Product | (NiFe) hydrogenase maturation protein HypF |
|---|
| Protein accession | YP_003158294 |
|---|
| Protein GI | 256829566 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0068] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCATGC AACGCTGGAA ATGGATCATC ACCGGAGGAG TGCAGGGAGT AGGATTTCGG
CCCTTCGTCT ACAAGGCCGC CCTGCACGCC AGGGTCACGG GACGGGTCCT GAACACCCCC
GAAGGCGTGC TCATCGAAGT CCAGGGCGCG CCGGATCAGC TCGGCCTCTT CGAAGACACG
TTTCAGGCCA CCATCCCGCC TCTGGCCCGC ATCGTGACCT GGGACCGGGA AACCCTCGAC
CCTCTGCCCG GCGAGGACGC CTTCCAAATA CTCAAAAGCA CGGGCGGGCA TGGGCACCAG
GTGCTCATCA GCCCGGACGT GGCCACCTGC GACGACTGCA TCGCGGACAT CCGCGACCCC
GAAAACCGCA GATACCGCTA CGCGTTCACC AACTGCACCA ATTGCGGCCC GCGATACACC
ATCACCCGCG CCATCCCCTA CGACCGCGCC TGCACGTCCA TGAGCTGTTT CCCGCTCTGC
CCGGACTGCC TGGAAGAATA CGAAAACCCG CTGGACCGGC GCTTCCATGC CCAACCCAAC
GCCTGCCCCG TGTGCGGGCC GAAACTGTGG TTGACGGACA GAACCGGCCG GACCTTGGGC
GAAAACGACG ACGCCATCCG CGCCACGGCC AGATTGCTTA TGGATGGCGG ACTGGTGGCC
ATGAAGGGGC TCGGAGGCTT CCACCTCGTC TGCAATGCCC GCGACCAGGA GGCGGTGCAA
CGGCTGCGGG ACCGCAAAAA AAGACAGGAC AAGCCGCTGG CCATCATGGT CCGGGACCTG
GACGCGGCCC GGAGCCTCTG CGCCCTACGC GAGGCCGAAG GAGATCTGCT GACAAGCAGG
CAGAGGCCCA TCGTGCTCGC CCAGGCCCGC CCGGACAGGG GCCTCGCGCC GGGACTTTCC
CCGGACACCG CCTATCTGGG CGTGATGCTG CCCTATACAC CCCTGCACCA TGTGCTTTTC
GACGAACTGT CGCATTGCGG CGCAGGGCCC ACAGCCCTGG TCATGACCTC CGGCAATCTG
AGCTCCGAGC CCATCTGCCT CGGCAATCGG GAGGCACTGC AACGTCTGGG GAGCATTGCC
GACACTTTTC TGCTGCACAA CCGCGACATC CTGATCCGCT GCGACGATTC GGTACTGCGG
GTGGTGGACG AAAGGCCCCA GTTCATCCGC CGGGCGCGCG GCTACACGCC CGCCCCCATC
GACCTGGCCC AGGACGGCCC CGTGGTGCTC GGCGTCGGCC CCCTGCTCAA GAACACCCTC
TGCCTGACCA AGGGGCGGCA AGCCTTTGTT TCGCAACATA TCGGCGACCT GGAGCACCTC
GAAGCCTACG GTTTTTTCCG CGAAACCCGC GCCCATCTGC AGGACATCCT GCAAGTCCAG
CCCCAGGCCG TGGTCCATGA CCTGCACCCG GATTTTTTGA GCACGGCCTT CGCCCGCGAG
TCCGGGCTGC CCTGCCTGCC GCTGCAGCAC CATTTTGCGC ACATCCACGC GGTCCTGGCC
GAAAACAAAT ACATGGGGAC GGCCATCGGA CTGGCCCTGG ACGGAGTGGG GCTGGGCGAC
GACGGCACCC TGTGGGGCGG AGAAGCCCTG CTGGTCGACA CGCAAAAAAT CCGGCACCAG
AGGCTGGCCC GCTTTTCTCA GGTCATGCTG CCCGGCGGGG ACGCGGCCAC GCGCGAACCC
TGGCGGCTGG CGCGGGCGTT TCTGCATGCC CTGAACATCC ATGCTCCAGC GGACAAGCCG
TGGCCGTGGC TTGCGGACTT CGCCGGCGCC GACAAGGTGG TCGGGCAGGT GCTGGAACGC
CGCATCAATT CGCCCCTCTC CTCCAGCTGC GGACGACTTT TCGATGCAGT GTCGGCCATG
CTCGGCCTGT GTGGACGCAT CTCCTATGAG GGTCAGGCGG CAATCCGACT GGAAGCCATA
CAAGACAAGG ATGAAAAAGG TGTTTATACG TGCTCTGTAA TTGAATATGA GGGGATTGTG
GAACTTGATA CCCTGGAACT TTTTGCGCAG GTTCACGCCG AGTGGCTCGG CGGCGAATGC
CCGGCAAAAA TCAGCAGGCG CTTTCATCTG GGTCTCATTG ACGGCCTGGC CAGGCTCTGT
GTCCTCCTGG CCGAAAAGTG CTCCTGCCGC ACGGTGGCCT TGAGCGGAGG GGTCATGCAG
AATCTGACCC TGGCCGCCGG GCTGCCCCGG GCACTGCACG CGCATGGGCT GACCGTGCTG
ACCCACCGGG AACTGCCGCC CAACGACGCC TGCATCTCTC TTGGCCAGGC CGCCTACGGC
CAACTGGTCC TGCAACCCTA A
|
|---|
| Protein sequence | MLMQRWKWII TGGVQGVGFR PFVYKAALHA RVTGRVLNTP EGVLIEVQGA PDQLGLFEDT
FQATIPPLAR IVTWDRETLD PLPGEDAFQI LKSTGGHGHQ VLISPDVATC DDCIADIRDP
ENRRYRYAFT NCTNCGPRYT ITRAIPYDRA CTSMSCFPLC PDCLEEYENP LDRRFHAQPN
ACPVCGPKLW LTDRTGRTLG ENDDAIRATA RLLMDGGLVA MKGLGGFHLV CNARDQEAVQ
RLRDRKKRQD KPLAIMVRDL DAARSLCALR EAEGDLLTSR QRPIVLAQAR PDRGLAPGLS
PDTAYLGVML PYTPLHHVLF DELSHCGAGP TALVMTSGNL SSEPICLGNR EALQRLGSIA
DTFLLHNRDI LIRCDDSVLR VVDERPQFIR RARGYTPAPI DLAQDGPVVL GVGPLLKNTL
CLTKGRQAFV SQHIGDLEHL EAYGFFRETR AHLQDILQVQ PQAVVHDLHP DFLSTAFARE
SGLPCLPLQH HFAHIHAVLA ENKYMGTAIG LALDGVGLGD DGTLWGGEAL LVDTQKIRHQ
RLARFSQVML PGGDAATREP WRLARAFLHA LNIHAPADKP WPWLADFAGA DKVVGQVLER
RINSPLSSSC GRLFDAVSAM LGLCGRISYE GQAAIRLEAI QDKDEKGVYT CSVIEYEGIV
ELDTLELFAQ VHAEWLGGEC PAKISRRFHL GLIDGLARLC VLLAEKCSCR TVALSGGVMQ
NLTLAAGLPR ALHAHGLTVL THRELPPNDA CISLGQAAYG QLVLQP
|
|---|
| |