| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2556 |
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| Symbol | |
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| ID | 5209525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | + |
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| Start bp | 3168723 |
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| End bp | 3171053 |
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| Gene Length | 2331 bp |
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| Protein Length | 776 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640596160 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_001276882 |
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| Protein GI | 148656677 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.34978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.63544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCCT GGCAGCAATC GGTTGTCGCC CGTCGCCGCC TGGTGGTGCG CGGCATTGTG
CAGGGGGTCG GTTTTCGTCC CTTCGTCTAC GGGCTGGCGC AGCGCTTCGG GTTGGGCGGG
TTCGTGTTCA ACGACAGCGA CGGCGTTACC CTGGAGATCG AGGGTTCCGT CAGCGCGCTC
GATGCGTTCG AGCAGACGTT GCGCAGCGCA CCGCCGCCAT TGGCGCGGAT CGACGCAGTG
ATCGCCACAA CGGTCGCGCC GCGTGGTGAA ACATCCTTTC ATATCGAAAC GAGCCGCGCC
GCAGCCGCAC GCAATGCCCT CATCTCGCCG GATGTCGCTA CGTGCGATGA TTGCCTGCGT
GAGTTGTTCG ATCCGAATGA CCGGCGCTTC GGTTACCCGT TTATCAACTG CACGAATTGC
GGTCCGAGAT TCACAATTGT GCTCGATGTG CCGTATGACC GGGCGCAGAC GACGATGCGC
GTCTTTCCGA TGTGCCCGGC ATGCCAGGCG GAGTATGATG ATCCCCTGAA CCGCCGCTTC
CACGCGCAAC CCAACGCCTG CGCTGTGTGC GGTCCTTCAC TGACGTTTCA CTGGTGGTCG
CCGGCGCCGC TCCCGAACCT TCCCGCCGCT GCGTCTCCGC TCGAACAGGC GGTGTTCGCA
CTGGCGCATG GCGCAATCCT GGCGATCAAG GGGCTGGGCG GGTACCATCT GGCGTGCAAT
GCGCTCGATC ATGATGCGGT CGCGCGCCTG CGCGCCCGGA AACAGCGCGA AGCCAGACCG
TTCGCGCTGA TGGCGCCCGA CCTGGCGACA ATCCGGCAGT TATGTTATGT CAAACCAGAA
GAGGCGACGC TCCTCGAAGC GCGCCAGCGT CCAATCGTAT TGCTCGACGC GCTGCCCGGT
GCGCCAGTTG CACCGTCCGT TGCGCCAGGG TACACAACGC TCGGCATCAT GCTGCCGTAC
ACACCGCTGC ACCATCTGCT GCTGCGCGCA TACGCGGCTG CAATGCCAGA TCAACCGGCG
GTGCTGGTGA TGACCAGCGG TAATCTGAGT GATGAACCGA TCGCCTACCG CGACGACGAT
GCCGCAGTGC GACTGAGGTC GATCGCCGAT GGCGCGCTGA CCCACAATCG CGACATTCAT
ATGCGCTGCG ACGACTCGGT GGCGCGCATC GTTGCGGGCG GAGTGCAACT GCTGCGCCGG
TCGCGCGGGT ATGCTCCCGA ACCGGTGACG CTGACGCTCA ACGTTCCCAA ACCGATCCTG
GCGACCGGCG GACACTTGAA GAACACCTTC TGCCTGGCGA AAGGGCGCGA TGCGTTTCTC
AGCCATCACA TTGGCGATCT GGAAAACCTG GAGACGCTGA CGTCCTTCCG TGAAGGGGTG
CGGCATTTTG CCAGGCTTTT CGATTGCGAA CCAGAAGTTG TGGCATACGA CCTGCATCCT
GAGTATCTGG CGACCAAAGA GGCGCTGGCG TCGGACATTC CACTGAAGAT CGGGGTGCAG
CATCATCATG CCCACATTGC CAGCGTTCTG GCAGAACATG GCATCGCGGG ACCGGTCATC
GGCGTGGCGG CGGATGGCAC AGGGTACGGT CTCGATGGCG CAATCTGGGG ATGCGAGGTG
CTGATCGTCG ATCTGCGCGA CTTCACCCGT TTTGCGCACC TGGCGTATGT GCCGTTGCCT
GGCGGTGATG CAGCCGTGCG GCAGGTCTGG CGGATCGGCG CGACGTATCT GCACCGCGCC
TTCGGTAATG GGTTCCTTGA CCTGGACATC CCGTTCGTGC GGCGGATCGA CCGCGAACAG
TGGCGACTGA TCGCCCGCAT GATCGAGCGC GGCATCAACG CGCCACCAAC CTCGAGCCTG
GGACGCCTGT TCGATGCGAT TGCCGCGATC GCTGGCATCC GTGATGTTGC GTTGTACGAG
GGTCAGGCGG CAATCGAATT GGAGACGACA GCGACCCCCG ATCCGCATCC CTATCCGTTT
GCGTTGCTTC CGGGAACGCC AATGCGCATC GATGTCACGC CGACCATTCA CGCAATTGTG
GAGGATATCC GGGCGGGCGC GCCGGTCGCG CGGGTCGGCG GGCGATTTCA CTGCACAGTA
GCCGACATGC TGGCGCAGGC GTGCGAACAG GCGCGCGCGA CCGGCGCGCC CGATGTGGTG
GCGCTCAGCG GCGGCGTTTT TCAGAACCGG CATCTGACCG AACTGCTGGT GCAGCGCCTG
GAACGCGCCG GTTTTCGTGT GCTGCTCAAC CGGCGCGTCC CGCCAAACGA CGGCGGTCTC
TGCCTGGGGC AGGCGGCCGT CGCTGCGGCG CGTTTGCTGG AGCAGGGTTG A
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| Protein sequence | MESWQQSVVA RRRLVVRGIV QGVGFRPFVY GLAQRFGLGG FVFNDSDGVT LEIEGSVSAL
DAFEQTLRSA PPPLARIDAV IATTVAPRGE TSFHIETSRA AAARNALISP DVATCDDCLR
ELFDPNDRRF GYPFINCTNC GPRFTIVLDV PYDRAQTTMR VFPMCPACQA EYDDPLNRRF
HAQPNACAVC GPSLTFHWWS PAPLPNLPAA ASPLEQAVFA LAHGAILAIK GLGGYHLACN
ALDHDAVARL RARKQREARP FALMAPDLAT IRQLCYVKPE EATLLEARQR PIVLLDALPG
APVAPSVAPG YTTLGIMLPY TPLHHLLLRA YAAAMPDQPA VLVMTSGNLS DEPIAYRDDD
AAVRLRSIAD GALTHNRDIH MRCDDSVARI VAGGVQLLRR SRGYAPEPVT LTLNVPKPIL
ATGGHLKNTF CLAKGRDAFL SHHIGDLENL ETLTSFREGV RHFARLFDCE PEVVAYDLHP
EYLATKEALA SDIPLKIGVQ HHHAHIASVL AEHGIAGPVI GVAADGTGYG LDGAIWGCEV
LIVDLRDFTR FAHLAYVPLP GGDAAVRQVW RIGATYLHRA FGNGFLDLDI PFVRRIDREQ
WRLIARMIER GINAPPTSSL GRLFDAIAAI AGIRDVALYE GQAAIELETT ATPDPHPYPF
ALLPGTPMRI DVTPTIHAIV EDIRAGAPVA RVGGRFHCTV ADMLAQACEQ ARATGAPDVV
ALSGGVFQNR HLTELLVQRL ERAGFRVLLN RRVPPNDGGL CLGQAAVAAA RLLEQG
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