| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4602 |
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| Symbol | |
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| ID | 3679952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5756792 |
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| End bp | 5759152 |
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| Gene Length | 2361 bp |
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| Protein Length | 786 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 637719957 |
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| Product | hydrogenase maturation protein HypF |
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| Protein accession | YP_325094 |
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| Protein GI | 75910798 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.879827 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACTG AGGAAATTCG AGTTCGCGGT ACTGTCCAGG GGGTGGGTTT TCGTCCTACG
GTGTACCGTC TGGCTAAGGC TTGTGGTTTG CGGGGGGATG TTTGTAATGA TGGGGAAGGG
GTGTTAATTC GGGTATGTGG TGACGAAGGG GCTTTGGCGG AGTTTGTTGT TAGATTGCAG
GAAGAATGTC CACCACTGGC GAAAATTAAT GAACTCGTCA GGACACCATA TCAAGGTGAG
TTGAACTTCC ATGATTTTGT TATTTCTCAT AGTGTTAGTG GCGTAGTGAG AACGGAAATT
AGTCCTGATG CGGCTACTTG TGTTGAATGT CAGCGAGAAA TTTTTGACCC CTTTAGCCGT
TTTTACCGTT ATCCCTTTAC TAACTGTACT CATTGCGGCC CCCGGTTGAG TATTATTCGT
GCCATTCCCT ATGACAGATG TAATACCAGT ATGTCTGCGT TTGTCATGTG TTCTGAATGT
GAAAAAGAAT ATCATGATAT CGAAAACCGC CGCTTCCACG CCCAACCTGT CGCCTGTCAC
ACCTGCGGCC CTAAAGCTTG GCTAGAACGG GCTGATGGTA AACCTGTGAC GGCTTCTATG
TTTTCTATGT TGGATGATGT GGATGCTGTT TGTACTTTGT TACAGAAGGG TGAAATTGTC
GCTATTAAGG GAATTGGTGG TTTTCATTTA GCTTGTGATG CTACCCAAGA AGCGGCTGTG
GAGAAATTGC GTCAGCGTAA GCGAAGATAT GATAAGCCTT TTGCTTTGAT GGCACGGGAT
ATTACTGTTA TTGAAAAATA TTGCTTTGTT AATGATAAGG AACGGGAGTT ATTAGATAGT
CCTACTGCAC CGATTGTTTT GTTAGGAAAA AGGACAGAGG AAATAAGTTC TTTCCCTATC
GCCTCCACTG TCGCACCTGG ACAAAATATT CTTGGTTTCA TGCTACCTTA TACGCCGTTG
CATCATTTGA TGCTCAAGCG GATGAATCGC CCAATTGTTT TGACAAGTGG CAATATTTCT
GATGAACCAC AATGTATTGA TAATGATGAA TCGAAAGAAA AGCTAAGTCA TATAGCTGAT
TATTTTCTTC TACATAATCG GGAGATTGTG AATAGAGTTG ATGATTCAGT TGTGCGGGTG
ATTGATAATA AAATACAAAT CATGCGTCGT GCTAGAGGTT ATGCGCCAGC AACGATAAAA
TTACCACCAG GATTTGATAA TATTCACCAA ATTTTAGCGA TGGGTAGTGA GTTAAAAAAC
ACCTTTTGTT TATTGAGAGA TTATGAAGCA ATTCTATCTC AACATTTGGG AGATTTAGAA
AATGCTTTGG CGTTTAATTG TTATCAGGAT ACATTGAATT TGTATTTAAA TTTGTTGCAA
CACAAACCAG AGGCGATCGC CGTTGATTTA CACCCTGAAT ATTTATCCAC AAAACTTGGT
CAAGAATTAG CCGCCGCCAA CCAGATTCAA CTGCAATATA TTCAACATCA TCACGCCCAC
ATTGCCGCTT GTATGGCAGA AAATCTTATT CCTTTAGATT CTTTGCCAGT CTTAGGTATT
GCTTGTGATG GACTAGGTTA CGGTGCAGAT GGTAAACTTT GGGGAGGAGA ATTTCTTTTA
GCTGATTATA CTCAATTCCA ACGCCTGGCT ACATTTAAAC CAGTGGCAAT GATTGGTGGT
GAGCAAGCAA TTTATCAGCC TTGGCGTAAT ACCTATGCTC ATTTATTAAG TGCCAATCTT
TGGGATAATT GTCAATTAAA TTACCATGAC TTAGAAATTA TTAAATTTTT ACAAAAACAG
CCGATAAATT TACTCAATCA ACTTATAGAA CAAAGTATTA ATACTCCTTT AGCTTCTTCT
GTAGGAAGGC TCTTTGATGC TGTGGCTGCG GCTATCGGCA TTTGTCCAGA AAAATGTAGC
TACGAAGGAC AAGCAGCGAT CGCCCTAGAA TCTATAGTCG ATATCCACAC ATTAAATAAT
CCTAAAGAAA CAGCAGTTTA TCCCTTTCAG GTTACTTTTT CCGATAATAT TTATTGTATA
GACTCATGCT CCATGTGGCA ATTATTGCTT GATGACTTAC AGCAGCAAAC TCCTCAACAA
GTTATTGCTG CTAAATTTCA TTTAAGTTTG GCTAATGTCA TTGTGGAGAC AGTCAAACAT
CTTCGTCAAC AAAACTTATT TAATCAAGTC GCCCTAACAG GAGGAGTGTT TCAGAATAGT
ATCTTATTAC AACTAGTCAC TAAGCAGTTA CAAAACTTAG AAATTAACGT ACTTACTCAT
AGCTTAGTTC CTACAAATGA CGGTGGTTTA TCACTAGGTC AAGCAATTAT CACAGCCGCC
AGATTAATGA AAAACTCTTG A
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| Protein sequence | MATEEIRVRG TVQGVGFRPT VYRLAKACGL RGDVCNDGEG VLIRVCGDEG ALAEFVVRLQ
EECPPLAKIN ELVRTPYQGE LNFHDFVISH SVSGVVRTEI SPDAATCVEC QREIFDPFSR
FYRYPFTNCT HCGPRLSIIR AIPYDRCNTS MSAFVMCSEC EKEYHDIENR RFHAQPVACH
TCGPKAWLER ADGKPVTASM FSMLDDVDAV CTLLQKGEIV AIKGIGGFHL ACDATQEAAV
EKLRQRKRRY DKPFALMARD ITVIEKYCFV NDKERELLDS PTAPIVLLGK RTEEISSFPI
ASTVAPGQNI LGFMLPYTPL HHLMLKRMNR PIVLTSGNIS DEPQCIDNDE SKEKLSHIAD
YFLLHNREIV NRVDDSVVRV IDNKIQIMRR ARGYAPATIK LPPGFDNIHQ ILAMGSELKN
TFCLLRDYEA ILSQHLGDLE NALAFNCYQD TLNLYLNLLQ HKPEAIAVDL HPEYLSTKLG
QELAAANQIQ LQYIQHHHAH IAACMAENLI PLDSLPVLGI ACDGLGYGAD GKLWGGEFLL
ADYTQFQRLA TFKPVAMIGG EQAIYQPWRN TYAHLLSANL WDNCQLNYHD LEIIKFLQKQ
PINLLNQLIE QSINTPLASS VGRLFDAVAA AIGICPEKCS YEGQAAIALE SIVDIHTLNN
PKETAVYPFQ VTFSDNIYCI DSCSMWQLLL DDLQQQTPQQ VIAAKFHLSL ANVIVETVKH
LRQQNLFNQV ALTGGVFQNS ILLQLVTKQL QNLEINVLTH SLVPTNDGGL SLGQAIITAA
RLMKNS
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