| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cla_0792 |
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| Symbol | hypF |
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| ID | 7410126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter lari RM2100 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012039 |
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| Strand | - |
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| Start bp | 750625 |
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| End bp | 752823 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 643717922 |
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| Product | transcriptional regulatory protein HypF |
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| Protein accession | YP_002575370 |
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| Protein GI | 222823796 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0531432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCACT TTGGATATGA AATTCATATT AAAGGGCTAG TGCAAGGCGT TGGCTTTCGC
CCTTTTGTTT TTAATATAGC TAAAGAGCTT AATTTAAAAG GTGAGGTTTA TAATAATAGC
TTAGGTGTTG TTATAATACT TGAGTGTAGC AATGATGAAT TAGAAATTTT TAAAGAAAAA
CTTTTTGCTA ATTTACCACC TTTAGCTAGG ATAGATGATT TTAATTTTTC TTATAAAAAA
CTTCAAAAAA CTTATAATGA ATTTAGCATA AGTACTTCAC AAGATAGTGA AAAATTTAGC
CCGATTTTAA GCGATTTTGC TCTTTGTGAG GATTGCTATA ATGAATTTTA TGATGAGAAA
AATCCGCGTT TTAAATACCC TTTCATTACT TGTACAAATT GCGGGCCAAG ATTTTCTATT
ATAAAAAAAC TTCCATATGA TAGAGTTAAT ACGACTATGA ATGAGTTTAA AATGTGTTCT
TTTTGTCAAA GTGAGTATGA TGATCCTACT AATCGTCGAT TTCATGCCCA GCCACTTTCA
TGCCCAAAAT GTAAAATTAC TATTTTTTTA AAAGATAAAA ATCAAAATAT TTTAGCCAAA
GATGAAAAAG CTTTTATCTT GCTTGCAAAG CTTTTAGAAG AAGGTAAAAT CATAGCTTTT
AAAGGTATGG GTGGGTTTCA TTTAATTTGT GATAGCACAA ATAAAAATGC TATAAATGAA
CTTAGAATAC GCAAAAATCG CCCTAAAAAG CCTTTTGCTA TCATGGTAAA AGATCTTAAA
ATGGCTCAAG AATTAGCTTT TATCAATGAA GCTGAGGCAA AACTTTTAAC TTCAAATTTA
AAACCCATAG TTATTTTAAA TAGCAAAAAT ATCCATAAAA GCTTAGCGCC AGATACTAAT
AAAATAGGTA TTATGTTAGC TTATATGGGA ACGCATTTAA TGCTTTTTGA ACATTTTAAA
AAACCTATCA TTGCAACAAG TGCTAATTTA AGCTCACAAA GCATTATTTA TGAAGAAACA
AAACTTTTAG AGCAACTTAG CGATGTGTTT GATTTTTATC TTGATTATGA TAGAGCAATA
TATAACTCAA GCGATGATAG CATTGCTCAA GTTATTGGTA AAGAGGTAAT GTTTTTAAGG
ACTTCAAGAG GTCTTAACCC ACTTTATATC AATACAGCAG GTATTTTTAA TGCAAAAGAA
AATATTCTAG CTCTAGGAAG TGAGTTAAAA AACGAATTTG CATGTTTTTT TAAAAATCAA
ATTTTTATTT CTCCTTATAT AGGTGATATG AAAAGTTTAG ACATACAAGA GAGATTTTTT
AAAATTTTAA CTTTCTTTCA AAACTCTTAT AAGTTAAATT TTGATCAAAT TTTAAGCGAT
AAACACCCAC AATTTAACTA TGTAAAAGAA TTTAAAGATT ATAAAAATTT TCGCGTGCAA
CACCACTATG CGCATTTATG TGCTTGTTTA TTTGAACATA AAATTTACAA AAATGATGTT
TTAGCCTTTG TTTTTGATGG GACAGGTTAT GGAGATGATG GAAAAATTTG GGGTGGGGAG
ATTTTTAGAG CAAATTTAAA AAGCTATGAA AGGCTAAATC ATTTTAAAAA TTTCAAACTA
ATTAATGCAG ATATTAAAAA CATTGCAAAT TTAGCTTTGG CTTTGATTTT TGATTTTAAT
TTAGAAAGCA AAGCTAGCGA GTTTTTAGCT AAATTTTCTC AAGTAAAATT AAACAATCTT
AAAAAAATTC ACACTCAAAG CTCTTTATAT ACGAGTTCTC TTGGTAGGAT TATTGATGCT
TTTGGCGCTT TTGCTTTTGA TATGCAAAAA CTTGATTATG AAGCACAAAT TGGACTTTTG
ATGGAAAAAT ATTATGATAA AAATCTTGAT TATAATTACA AATTTGATAT CTATGAAAAA
GAAATTTGCT TTAAAAATGC CTTTTTGCAA GCTTTAGAAG ATAAAGATAA GGTTAAAATT
AGCACTGGTT TGCTTAATGG CATTGCAAAT TTAATTATAG AATATTCAAA AGATTTTAAA
GAAGAAGTGC TTTTATGTGG CGGGGTATTT CAAAATAAAA CCTTGCTTGA AATTTTAGTT
CGAAAAAATT TTGCTTATAA AACTTCCTTA CAATTTCCTT GCAATGACAG CTCTATTGCG
CTTGGACAAC TTGTGCATTA TTTATCTTTA AAAACTTAA
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| Protein sequence | MSHFGYEIHI KGLVQGVGFR PFVFNIAKEL NLKGEVYNNS LGVVIILECS NDELEIFKEK
LFANLPPLAR IDDFNFSYKK LQKTYNEFSI STSQDSEKFS PILSDFALCE DCYNEFYDEK
NPRFKYPFIT CTNCGPRFSI IKKLPYDRVN TTMNEFKMCS FCQSEYDDPT NRRFHAQPLS
CPKCKITIFL KDKNQNILAK DEKAFILLAK LLEEGKIIAF KGMGGFHLIC DSTNKNAINE
LRIRKNRPKK PFAIMVKDLK MAQELAFINE AEAKLLTSNL KPIVILNSKN IHKSLAPDTN
KIGIMLAYMG THLMLFEHFK KPIIATSANL SSQSIIYEET KLLEQLSDVF DFYLDYDRAI
YNSSDDSIAQ VIGKEVMFLR TSRGLNPLYI NTAGIFNAKE NILALGSELK NEFACFFKNQ
IFISPYIGDM KSLDIQERFF KILTFFQNSY KLNFDQILSD KHPQFNYVKE FKDYKNFRVQ
HHYAHLCACL FEHKIYKNDV LAFVFDGTGY GDDGKIWGGE IFRANLKSYE RLNHFKNFKL
INADIKNIAN LALALIFDFN LESKASEFLA KFSQVKLNNL KKIHTQSSLY TSSLGRIIDA
FGAFAFDMQK LDYEAQIGLL MEKYYDKNLD YNYKFDIYEK EICFKNAFLQ ALEDKDKVKI
STGLLNGIAN LIIEYSKDFK EEVLLCGGVF QNKTLLEILV RKNFAYKTSL QFPCNDSSIA
LGQLVHYLSL KT
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