| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_03890 |
|---|
| Symbol | |
|---|
| ID | 7314064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | + |
|---|
| Start bp | 399639 |
|---|
| End bp | 401894 |
|---|
| Gene Length | 2256 bp |
|---|
| Protein Length | 751 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643610813 |
|---|
| Product | (NiFe) hydrogenase maturation protein HypF |
|---|
| Protein accession | YP_002508143 |
|---|
| Protein GI | 220931235 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0068] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 55 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGA GGCGGTTACA ATTAGAAATA GAAGGTATTG TTCAGGGGGT GGGTTTCAGG
CCTTTTATCT ATCGTCTTGC CAGGGAAAAT AATCTTAATG GGTGGGTTCT GAACACCAGT
GGGGGTGTTT TAGTTGAAGT TGAAGGTAAT CAAAAGACCC TTGAGATGTT TATCAGACAA
ATTGATGAGG AGTCACCCCC ACTGGCCCAG ATTACTACTA TCAAATCTAG AGAAGTCTCT
GTTAGAGAAG ACAGTAGTTT TGTCATTAAG GATAGCAGGA AAACATATTA TACGCAAGTA
CAGCTTCCTC CTGATATTGC CATTTGTAAT GATTGTCTCC ATGATATAAT GGACCCTACC
AACAGGCGCT ATCGTTATCC CTTTACAAGT TGTGTTAACT GTGGTCCCCG TTTTAAGATT
ATCAAATCCC TCCCCTATGA CCGCCCCCGG ACTACAATGA AGAAATTTAA AATGTGTCCT
GAATGTAATA CTGAATACAA TAATCCTCTG GATAGAAGGT TTCATGCCCA ACCCAACGCT
TGCCCACTAT GTGGGCCCCA GCTCTGGCTA AAAAAAATGA GTGGGGAAAA GTGCCTTACC
CGGGACCCCA TAGGTCTTAC CATTGACCTG CTTAAAAAGG GAAACATAAT AGCCATTAAG
GGCATTGGTG GATTTCACCT TATGTGTGAT GCTACCGAAA GTGATGTGAT AGCAAATCTC
AGGACGAGGA AGAGGAGACC AGATAAACCC CTGGCGTTGA TGATGAATAA ACTGACTACT
GTTAGAAAAT ATTGCAATGT TGGTAGTATG GAAGAGGAAA TATTAACAGG GATAAGGCGT
CCCATTGTCT TACTTGATAA AAAAGGGGAG AAGTTACCCC GTAATATTGC TCCTGGAATT
AGATACTATG GTGTTATGTT GCCATATACC CCCCTGCATT ATTTGTTGTT CGATAAAGGT
ATAGAGGTTT TAATTGCTAC CAGTGGAAAC GTCAGTGGTA ACCCCCTGGA ATACCAAAAT
GGAGGTGTTT TTGAAAACTT AAAAGGTATT GCTGATTATG TTCTTGGGCA TAACAGGGAG
ATATATGTTC CTGTAGATGA TTCAGTCGTA AGGGTTGTTG GTGGTAAAAA GAGAGTGATA
AGACGGGCCA GGGGTTACGT TCCCCAACCT CTCATGGTCG GGGGCCTTGA CAATGGTCTG
GCGTTGGGGG GTGACCAGAA AAATACCTTC TGTTTTGCCA GAAATAAGTA TGCCTTTATA
AGCCAGTATC TAGGGGATTT AGGGAATATC GATAACTATA ATAATTTTAA ATTAATGATA
GATCATTTTA AGGAGTTATA TAAAATAAAA CCAGATTTTG TTGTCCATGA CCTCCATCCG
GATTATCAAA CGACCTATTA TGCTAGTTTT TACGGGGATA AGATAGGTGT CCAGCACCAT
CATGCCCATA TAGCCAGTTG TATGGCTGAA AATAACATAG ACGAAAAAGT AATTGGTCTT
GCTTTTGATG GAACAGGTCT GGGAAATGAT GGTAATATAT GGGGTGGTGA ATTCTTAATT
TGTGATTTTA AAGATTTTAA AAGGGGTGGC CATTTAAATT ATATGAAAAT GCCCGGGGGT
GATATGGCAA TAAAGGAACC CTGGCGTCTG GCGGTTAGCT ATCTTAATCG CTTAAGGTAT
GATAAAGCTG ATATTATAAA CCTGTTGAGG ATAGATGAAG TGGAGGCAGA CATAATTCTG
AAAATGCTCA ATAAGGGTTT CAATTGTCCG GAAACATCAA GTATGGGTCG ACTCTTTGAT
ACTGTTGCCG CTTTAATAGG CTTGCGAAAA AGGATAACCT ATCAGGCTCA GGCAGCCCTT
GAACTGGAAT CAATTGCAGA TAATAATACA GAAGAGATAT ATCATGTTAG TATCGAGGAA
AAGGGTCAAA AATATGTTGT TAATACCGAC CCGATGATGG GGGGTATTAT CAGTGACCAT
AAAAAGGGTG TTAAAAGATC GATTATTTCA TCTAAATTTC ATAATACAGT TATTGCATTT
ACCCTGGAAA TGTGCAGGCT AATCAGGCAT AAATACGGTA TTAACAGTGT TGCTTTGAGT
GGTGGAGTCT TTCAAAATAA ATTATTATTA GAGATGTTAT GTGCTGGATT GAAGGAACAA
AATTTTAAAG TATATTCACA GGCAAAAATA CCCTGCAATG ATAGCGGGTT ATCCCTGGGA
CAATTGGCTA TAGCCAGTAA CCGGAGAAAG GATTAG
|
|---|
| Protein sequence | MKKRRLQLEI EGIVQGVGFR PFIYRLAREN NLNGWVLNTS GGVLVEVEGN QKTLEMFIRQ
IDEESPPLAQ ITTIKSREVS VREDSSFVIK DSRKTYYTQV QLPPDIAICN DCLHDIMDPT
NRRYRYPFTS CVNCGPRFKI IKSLPYDRPR TTMKKFKMCP ECNTEYNNPL DRRFHAQPNA
CPLCGPQLWL KKMSGEKCLT RDPIGLTIDL LKKGNIIAIK GIGGFHLMCD ATESDVIANL
RTRKRRPDKP LALMMNKLTT VRKYCNVGSM EEEILTGIRR PIVLLDKKGE KLPRNIAPGI
RYYGVMLPYT PLHYLLFDKG IEVLIATSGN VSGNPLEYQN GGVFENLKGI ADYVLGHNRE
IYVPVDDSVV RVVGGKKRVI RRARGYVPQP LMVGGLDNGL ALGGDQKNTF CFARNKYAFI
SQYLGDLGNI DNYNNFKLMI DHFKELYKIK PDFVVHDLHP DYQTTYYASF YGDKIGVQHH
HAHIASCMAE NNIDEKVIGL AFDGTGLGND GNIWGGEFLI CDFKDFKRGG HLNYMKMPGG
DMAIKEPWRL AVSYLNRLRY DKADIINLLR IDEVEADIIL KMLNKGFNCP ETSSMGRLFD
TVAALIGLRK RITYQAQAAL ELESIADNNT EEIYHVSIEE KGQKYVVNTD PMMGGIISDH
KKGVKRSIIS SKFHNTVIAF TLEMCRLIRH KYGINSVALS GGVFQNKLLL EMLCAGLKEQ
NFKVYSQAKI PCNDSGLSLG QLAIASNRRK D
|
|---|
| |