| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_p0172 |
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| Symbol | hypF |
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| ID | 5148623 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009475 |
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| Strand | - |
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| Start bp | 127677 |
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| End bp | 129944 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640539071 |
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| Product | carbamoyltransferase hypF |
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| Protein accession | YP_001220504 |
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| Protein GI | 148241003 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein
[TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGAGG CTTCCCAAAT TGCGGCTTTG GAAGGCCGCA GCATCGAGGT TGTCGGACGT
GTTCAGGGCG TTGGCTTCAG GCCATTTGTC CAGCGTTTGG CTAAGCAGTT GGGGCTTGCC
GGATGGGTCC GTAACTACTC AGGCCACGTT CAGATTCTCG TGCGCGGCGA CCGGGGTAGC
CTAGATCAAT TCGCCATGGA TCTGATTGCC AAGGCTCCGG CATTCGCAAG GCCACAGATT
GAATCAATCG TTCCGACTTA TACCGACGAG TTCGACGATT TCTTAATTGT CGAAAGTGGA
AGTGGAGGAC TCAGCGCGGT CGAGCTCGCG CCAGATCAAT CGATTTGCGA AGATTGTCTT
GCAGAGATTC ATGATCCCAC CGCTCGTAGA TACCGTTATC CCTTTGCAAA TTGCACGCAG
TGCGGCCCAC GTTATACTAT CATTCGCAAG CTTCCCTATG ATCGCGCGAA CACCACGATG
GCGGATTTCG CGTTGTGTCG GCGCTGCCGC GGGGAGTACG CCGACCCTAA TGACCGCCGG
TTCCACGCCG AGCCAATCGC CTGTCCGGAT TGTGGGCCGC GCTTGCGGTT CGTCGCCGCA
GACGGCGACC TCGCGGTCGA AAACGACGAT GCTCTGGCCG CGGCTGTCGA TCTTTTGCGG
CGCGGCTTGA CGGTGGCCGT AAAGGGAATC GGTGGCTATC ACCTCCTGTG TGACGCTACG
CGCGAGAGTG CGGTGGCTCG ACTGCGGCAA TCCAAAAATA GACCGCACAA GCCGTTTGCC
GTCATGGTGC CGACGGACGA TAAGCTCGCA TGGCGACGTC TGGCGGCAAT TGACGTGGTC
GAAGAAGCTG CGCTGCTTGA TCCCTCCCGT CCGATCGTCC TCGTCCGCAA GCGTCCGGAG
TCGCCTCTTG CGCCCGCTGT GGCCTCAGGA ATGGCGTATG TGGGCCTGAT GCTGCCATAC
AGTCCGTTGC ATCACTTACT GCTCGACGCG TTTGAAAAAC CGGTGGTCGC CACCAGCGCC
AATATCAGCG GTGAGCCAGT GCTCACGGAT GCGGCGGACG TTGAACGTCG GCTGGCCCGC
TGCTGCGACG GCTTTCTGCA TCATGACCGA GCAATCGAAC GCCCCGCAGA CGATCCAGTC
GTGCAGGTCA TCGCCGGACA AATGAAGTCC CTGCGGCTCG GACGGGGAAC GGCACCCCTG
ACGATCAAGA CTCCATATCT GTTGCCCGAA CCCATCTTGG CGTGCGGCGG CCAGTTGAAG
ACAACGGTCG CTTTGGCGTT CGGCGATCGG ATCGTGATCT CCCCCCATAT TGGGGATATG
GGCAACATGC GCTCCTTGCG CGTCTTTGAG CAGGCCGCGA ACGGCCTTCA ATCGCTCTAT
GGCACCGTCG CGCGACACAT CGTTCACGAT GCCCATCCCG ATTTCACCAG TACTCGGTGG
ACATCTCGGC AACGCCTGAA GTCTGCGGCG ATCCAGCATC ACCTTGCGCA CGCGTCTGCG
CTGGCAGGGG AGCACGGCAG AGAGGCGCCG ATGCTGGTGT TTGCATGGGA CGGTTTGGGA
TTCGGTCAGG ACGGAACGTC ATGGGGCGGC GAGACGCTGA TGGGATCTCC CGGTCGCTGG
CGGCGCGTCG GGACAATCCG TCCGATCCGC TTGGTTGGTG GTGATCGCGT CGCCCTCGAG
CCATGGCGCA GCGCCTGTTC GGTTTGCTGG GAAGCCGGCA TCGACTGGGG CAACCACCGG
CCCGAATTTG TCGACGTCCG TCGTGTGTGG GAGACGAAGT CCGGCACGCT TGAAACGAGC
GCCGTGGGTC GATTGTTCGA TGCGGCCGCG GCGCTGCTCG GCCTCGCAGA GGCGGTGAGC
TATGACGGGC ATGCTCCGGC GTTGGTCGAA AGCATCGCCG GTAGCCTGCC AGACGCCTCG
CCGCTTCCGG TGCTTGAGGC TGGCGATCTC CGCATCATGG ATTGGACACC GCTCGTGCCG
CTATTGCTGG AGGCGGAGGT GCCCGTCAGC CGCCGCGCGG CGGCGTTTCA CGCGGCTCTG
GCCGCCACAA TCCTGGCCGA CGCGAGATAT CGGCGCTCCG TGGACGGCAC AAATTCGGTG
GGTCTGACCG GCGGCGTGTT TCAGAATCGG CTGCTTACGG AGCGCGCGGT CGCCTTGCTG
AAGTGTGATG GTTTCGAGAT ACTGCTCCAC GAACGCGTGC CGCCGAACGA CGGCGGCCTC
AGTTTTGGAC AGGCGGTCGA GTTCGCGGCC AGGAGTGCGG GCACATGA
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| Protein sequence | MPEASQIAAL EGRSIEVVGR VQGVGFRPFV QRLAKQLGLA GWVRNYSGHV QILVRGDRGS
LDQFAMDLIA KAPAFARPQI ESIVPTYTDE FDDFLIVESG SGGLSAVELA PDQSICEDCL
AEIHDPTARR YRYPFANCTQ CGPRYTIIRK LPYDRANTTM ADFALCRRCR GEYADPNDRR
FHAEPIACPD CGPRLRFVAA DGDLAVENDD ALAAAVDLLR RGLTVAVKGI GGYHLLCDAT
RESAVARLRQ SKNRPHKPFA VMVPTDDKLA WRRLAAIDVV EEAALLDPSR PIVLVRKRPE
SPLAPAVASG MAYVGLMLPY SPLHHLLLDA FEKPVVATSA NISGEPVLTD AADVERRLAR
CCDGFLHHDR AIERPADDPV VQVIAGQMKS LRLGRGTAPL TIKTPYLLPE PILACGGQLK
TTVALAFGDR IVISPHIGDM GNMRSLRVFE QAANGLQSLY GTVARHIVHD AHPDFTSTRW
TSRQRLKSAA IQHHLAHASA LAGEHGREAP MLVFAWDGLG FGQDGTSWGG ETLMGSPGRW
RRVGTIRPIR LVGGDRVALE PWRSACSVCW EAGIDWGNHR PEFVDVRRVW ETKSGTLETS
AVGRLFDAAA ALLGLAEAVS YDGHAPALVE SIAGSLPDAS PLPVLEAGDL RIMDWTPLVP
LLLEAEVPVS RRAAAFHAAL AATILADARY RRSVDGTNSV GLTGGVFQNR LLTERAVALL
KCDGFEILLH ERVPPNDGGL SFGQAVEFAA RSAGT
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