| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1950 |
|---|
| Symbol | |
|---|
| ID | 5164186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 2258265 |
|---|
| End bp | 2260535 |
|---|
| Gene Length | 2271 bp |
|---|
| Protein Length | 756 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640549444 |
|---|
| Product | (NiFe) hydrogenase maturation protein HypF |
|---|
| Protein accession | YP_001230713 |
|---|
| Protein GI | 148264007 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0068] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGGATTG GGGAGCGCAT CCGTGTTGAA ATAGAAGGTA TTGTCCAGGG GGTCGGTTTT
CGGCCTTTCG TCTTCCGGCT TGCCCGGCGG CACAGTTTGA CGGGGTGGGT GAGCAATACA
TCCCGCGGGG TGTTGCTGGA GGCGGAGGGG GGGGCGGATG ACCTGGCCGC CTTTTATCTT
GGCCTGCAAA ACGAGACTCC TCCCCTAGCG GTGATCTCCG GCATCCGGCG AAGCAGCGTT
CCGCTCCTCG GCAGCGGTGT TTTTTCGATT CTTGCCAGCA GAGGCGGTGA AGGGGGCGTG
CAGATCTCCC CCGATTGCGA CGTTTGCCCC GATTGCCTGA CGGAACTGTT TAACCCGCGT
GACCGCCGCT ATCGCTATCC TTTCATAAAC TGCACCAATT GCGGCCCCCG TTATTCCATT
ATCACGGCCA CCCCCTACGA CCGGGAATCG ACCACCATGG CCTCATTTGC CATGTGCGAC
GACTGCCGCA CCGAGTACGA AGATCCCGCC GATCGCCGCT TTCATGCCCA GCCCAATGCC
TGTCCCGTCT GCGGGCCAAA GCTTGAGCTC CTCGACTCAC GAGGCGGCGC GGTCGACTGT
GACCCGCTCG ATGAGGCCGT TCACTTGCTG AAGGAGGGAC GGATCCTGGC AGTGAAGGGG
ATCGGCGGTT ACCACCTGGC GGTTGACGCC TGTAATGAAA CAGCGGTAGC GGAATTGAGG
CGGCGCAAGA AGCGGGATGA AAAACCCTTT GCCCTGATGG TGGCAGGTCC GGAGCAAGTC
GAAGTTTTGG CCCATGCCGA TCAGACCGAA ATGCGCCTCC TGACGGGGCC GGAACGCCCC
ATTGTCCTGC TCGGCAAGCG TGACGGCAAC CCCATTGCCA GGCGGGTCGC CCCAGCCAAC
GGCTATTTCG GCGTAATGCT CCCTTCGACG CCTCTTCACC ATCTGCTGCT CACCGATAAC
TTTGCCGCCC TGGTGATGAC CAGCGGCAAT GCTTCGGATG AGCCGATCGT TTATCGCGAT
GCGGACGCAT TGGAGCAACT GGCCGACATC GCCGACTATT TTCTGGTCCA TGATCGGAAA
ATCCATAGCC GCAGCGACGA TTCGGTGATC CGCGTCTTTC GTGGAAATCC CCTCTTTCTG
CGCCGTTCCC GCGGTTATGT TCCGCGGAGT GTCATGCTCC AGGCCCCCCA AAGGCAGGTG
CTTGCAGTCG GAGCCGAACT GAAGGGCGCT ATCTGTCTGA CACGGGGAGA GCGGGCATTC
ATGAGCCAAC ATCTCGGCGA TCTGAAGAAT GTCGCAACCC TCAGTGCCCT CGAAGAGACC
GTCTCCCATC TGGAGCGGGT ATTGGCCATA GCGCCTGAAG TGGTGGCCCA CGACCTCCAC
CCCGACTACC TGTCCACGTC GTATGCCGTC GGCAGGAGCA GTCTGCCGCA GGTGGCGGTG
CAGCATCACC ATGCCCATAT GGCTTCCTGC ATGGCGGAAA ACGGCCTGGA TGGGAAGGTT
ATCGGCGTGA TCTTCGACGG CACCGGCTAC GGCCTCGACG GCACCATCTG GGGGGGGGAA
TTCCTGCTCG GCGATTATCG AGGTTTTCAG CGGCGCGGGC ATCTGACCTC CGTGCCTATG
CCGGGTGGCG ATGCAGCGGT CAGGGAGCCA TGGCGCATGG CGCTTTCCCA TTGTTATGCG
GCCTTGGGCG CAGAGGCCTT GATACTTCCG CTGCCCTTCC TTTCGGTGCT TTCCGAACAG
GACAAACGGC TGCTGCTGCG GATGCTGGAG CGGGGCATCA ACTCGCCGCA GACATCAAGC
TGCGGCAGGC TGTTCGATGC CGTTGCGGCG CTGATCGGCG TGCGTGGCAG GGTGTCCTTT
GAGGGACAGG CGGCAATCGA GCTGGAGGCT CTGGCAGAAA AAGGGGTGTC CATGTGGAAC
TATCCCTATG CAGTTATTTC CCGTGACAAC AAGCAGGTTG TCGATTTCAG GCTCTTGTTC
GCAGCGATGG TGCAGGACCT GCTTGCGGGT GCAGCGCCTT CCGACATGGC GCGCCGCTTT
CACGACACCC TGACCGTTGC CGTTGCCGAT GTCTGCGCAA AGATACGTAA AGATAGCGGC
GTTGACCGGG TGGTGCTGTC CGGCGGTGTT TTTCAGAATA AACTCCTGGC GGAGGGGGTC
CACTCCCTCC TCACGGAGAG GGGGTTCCAG GTTTTCAGCC ACCGACTCGT TCCCCCCAAC
GACGGTGGGC TTGCTCTTGG GCAGGCAGCT ATAGCGGGAA GGAGTCAATA A
|
|---|
| Protein sequence | MRIGERIRVE IEGIVQGVGF RPFVFRLARR HSLTGWVSNT SRGVLLEAEG GADDLAAFYL
GLQNETPPLA VISGIRRSSV PLLGSGVFSI LASRGGEGGV QISPDCDVCP DCLTELFNPR
DRRYRYPFIN CTNCGPRYSI ITATPYDRES TTMASFAMCD DCRTEYEDPA DRRFHAQPNA
CPVCGPKLEL LDSRGGAVDC DPLDEAVHLL KEGRILAVKG IGGYHLAVDA CNETAVAELR
RRKKRDEKPF ALMVAGPEQV EVLAHADQTE MRLLTGPERP IVLLGKRDGN PIARRVAPAN
GYFGVMLPST PLHHLLLTDN FAALVMTSGN ASDEPIVYRD ADALEQLADI ADYFLVHDRK
IHSRSDDSVI RVFRGNPLFL RRSRGYVPRS VMLQAPQRQV LAVGAELKGA ICLTRGERAF
MSQHLGDLKN VATLSALEET VSHLERVLAI APEVVAHDLH PDYLSTSYAV GRSSLPQVAV
QHHHAHMASC MAENGLDGKV IGVIFDGTGY GLDGTIWGGE FLLGDYRGFQ RRGHLTSVPM
PGGDAAVREP WRMALSHCYA ALGAEALILP LPFLSVLSEQ DKRLLLRMLE RGINSPQTSS
CGRLFDAVAA LIGVRGRVSF EGQAAIELEA LAEKGVSMWN YPYAVISRDN KQVVDFRLLF
AAMVQDLLAG AAPSDMARRF HDTLTVAVAD VCAKIRKDSG VDRVVLSGGV FQNKLLAEGV
HSLLTERGFQ VFSHRLVPPN DGGLALGQAA IAGRSQ
|
|---|
| |