| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DET1432 |
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| Symbol | hypF |
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| ID | 3229239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides ethenogenes 195 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002936 |
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| Strand | + |
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| Start bp | 1302427 |
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| End bp | 1304718 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637120992 |
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| Product | [NiFe] hydrogenase maturation protein HypF |
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| Protein accession | YP_182140 |
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| Protein GI | 57233776 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCAC CTAAGCAAAC CAAGCGGTTT GCCTTTGCCA TCAGCGGGAT TGTCCAGGGG
GTGGGCTTCC GCCCCTTTGT TTACCAGCTG GCCGCCAAAC ACGGCTTAAA CGGCTGGGTC
AGGAATACTT CTGCCGGAGT GGAGATAGAG GCAGAAGGGA TTGAACAAGC GCTGGACAGC
TTTTCAGATG AGCTAATTAG CCTCAGCCCG CCCCAGTCAG TTATTAAAAC ATTTAAACAG
ACTGAAATAC CCTTAACAGG TGAAGAAGGG TTTACCATCA AACCCAGCCA GAGCCTTTCC
GGGCGTTTTC AGCTGGTTTC ACCGGATATA GCCACCTGCA CCCAGTGCCA AAATGATGTA
TCTGACCCCC GAAACCGCCG CTACCGTTAC CCCTTTACCA ACTGCACCAA CTGCGGCCCC
CGTTTTACCA TAATTGAGGA CATACCCTAT GACAGACCCC TGACCACTAT GAAAGACTTT
GAAATGTGCC CGGTCTGCCA GGCCGAATAT GACAACCCTT TAGACCGCCG TTTCCATGCC
CAGCCCAATG CCTGCCCGGT GTGCGGCCCC CGCCTCTGGC TGGTGGATAA AACCGGAAAA
GAGCTTGAAA GTGCCGATGC TATAGCAGAA GCCGCAAAAC TGCTGAAAGA CGGCCGGATT
TTAGCCATAC GGGGTCTGGG GGGCTTTCTG CTGGCCGCTG ACGCCACTAA TCAGCTGGCG
GTTAATACCC TCCGGCGCCG TAAACACCGC CCTTCCAAAC CCTTTGCGGT TATGCTTCCT
GATATAGCCG AAGCCCGCAA ACACTGTTTT ATATCCGCCG AAGAGGAAAA GCTGCTTATT
TCACCTGCCG CACCCATTGT CCTTTGCAAA TGGAACAGGG AAAGCCCCAT ATGCCCCGAA
ACCGCCCCTA AACAAAATTA TCTGGGCATA ATGCTGGCAT ACACCCCTCT CCACCACCTG
CTTTTAAAGG AAACGGGTAA ACCCCTTATC ATGACCAGCG GCAATCTGAG CGCAGAGCCC
ATTGCCAAAG ACAATGACGA AGCCCTGAAA CGGCTGGGCA ATATAGCGGA TTATTTTCTG
CTTCACAACC GCCCCATCTA CTCCCGTTAT GATGACAGCG TGGTCATGTA TGAGGCCGGT
GCAAAAAGGG TAATCAGGCG GGGCAGGGGT TATGCCCCCT ACCCTGTCCA GACCTCTTTT
ACGGATAAAG AAGTACTGGC GCTTGGTCCG CAGGAAAAAA ACACCTTCTG CCTGCTTAAA
GACGGTTATG CTTTTGTCAG CCAGCATATA GGGGATATGC AAAACCCCGA AACGCTGGAC
AGCTTTGAAG AAACCCTGGC GGTTTACCTG AAGCTATTCC GCTTAAACCC CCAAATAATA
GCTTCAGACC TCCACCCCGG TTATATTACC ACCGCTCTGG CTGAGGCACG CTCAGCCAGC
CTTGACATAC CTCTGGTCAA AGTCCAGCAC CACCATGCCC ATATTGCCTC CTGTCTGGCG
GAAAACAACT GTGACGAAGA GGTTATCGGG GTGGCTCTGG ACGGCACCGG CTACGGGCTG
GACGGGCATA TCTGGGGCGG GGAATTTTTC TGCGGGGGCA TAAAACAGGG TTTTAGCCGC
CAAGCCCATC TGGAATACCT GCCTCTCCCC GGAGGCGAAG CCGCCATTAA AAAACCCTAC
CGCACAGCCG TGTCATATGT CTACACCCTG CTGGGGGAAG AGGGTTTGAA CTTTTTTAAA
AATATAGAAC CGGAAGAACT GGATATCATA AAAACCCAGC TTGAGCGGAA ACTGAACTCA
CCCCTTACTT CCAGTGCGGG CAGGCTGTTT GATGCAGTTG CCGCCCTGTG CGGAATCTGC
CAAGTGGCAA ACTATGATTC CCAGCCGGCC ATAGAGTTGG AAACCGAAGC CGGGGATACC
GAATTTGCCC AGTGCTACCC CTTTGAGTTA GACTTAGACA AGGGCATTTA CCTGATACGG
CTGAAGGGCA TAATCCAAGG CGTCCTTTCA GACCTTTCAT CAGGCAAAAC AGCCGCTTAT
ATATCGGTAA AATTTCACAA TACTGTCAGC CAGATAGTTC TGGACACCTG CCTAAGGCTT
TCAGCCCGAA GCGGCCTTAC CAAAGTAGCC CTTTCAGGCG GGGTTTTCCA GAACAGGCGG
GTTTTCCGCC AGGTGATAAA AAAGCTGGAA GCAGAGGGAT TTGAAGTGAT TACCCATAAA
GAAATCCCCT CTAATGACGG CTGCATATCA CTGGGTCAGG CGGTAATAGC CACCAGCCAA
GGAGGAATAT AA
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| Protein sequence | MPAPKQTKRF AFAISGIVQG VGFRPFVYQL AAKHGLNGWV RNTSAGVEIE AEGIEQALDS
FSDELISLSP PQSVIKTFKQ TEIPLTGEEG FTIKPSQSLS GRFQLVSPDI ATCTQCQNDV
SDPRNRRYRY PFTNCTNCGP RFTIIEDIPY DRPLTTMKDF EMCPVCQAEY DNPLDRRFHA
QPNACPVCGP RLWLVDKTGK ELESADAIAE AAKLLKDGRI LAIRGLGGFL LAADATNQLA
VNTLRRRKHR PSKPFAVMLP DIAEARKHCF ISAEEEKLLI SPAAPIVLCK WNRESPICPE
TAPKQNYLGI MLAYTPLHHL LLKETGKPLI MTSGNLSAEP IAKDNDEALK RLGNIADYFL
LHNRPIYSRY DDSVVMYEAG AKRVIRRGRG YAPYPVQTSF TDKEVLALGP QEKNTFCLLK
DGYAFVSQHI GDMQNPETLD SFEETLAVYL KLFRLNPQII ASDLHPGYIT TALAEARSAS
LDIPLVKVQH HHAHIASCLA ENNCDEEVIG VALDGTGYGL DGHIWGGEFF CGGIKQGFSR
QAHLEYLPLP GGEAAIKKPY RTAVSYVYTL LGEEGLNFFK NIEPEELDII KTQLERKLNS
PLTSSAGRLF DAVAALCGIC QVANYDSQPA IELETEAGDT EFAQCYPFEL DLDKGIYLIR
LKGIIQGVLS DLSSGKTAAY ISVKFHNTVS QIVLDTCLRL SARSGLTKVA LSGGVFQNRR
VFRQVIKKLE AEGFEVITHK EIPSNDGCIS LGQAVIATSQ GGI
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