Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sputcn32_2093 |
Symbol | |
ID | 5078298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella putrefaciens CN-32 |
Kingdom | Bacteria |
Replicon accession | NC_009438 |
Strand | + |
Start bp | 2396956 |
End bp | 2399361 |
Gene Length | 2406 bp |
Protein Length | 801 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640499255 |
Product | (NiFe) hydrogenase maturation protein HypF |
Protein accession | YP_001183613 |
Protein GI | 146293189 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0068] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAACATG TTGTCCTAGA GAACCAAGCG CTCAAGCGAT ATAAATTGCA TATTACAGGC ATAGTACAAG GGGTGGGGTT TCGCCCCTTT GTATATCGTT ACGCCCTTGA TAACCAACTA ACGGGCACTG TACTCAATAA TGCCCAAGGT GTAACCATTG AGTTGCAGGG TAATGAGACT GGTCTCGAAC TTTTTCTCAC CGCACTCAAA TCCAATCCAC CACCACTGGC GCGAATCGAT CAGATAACTC AAACATTACT ACCCGTTATT GAAGGCGAAA CCCTATTTGC CATCATCGAA AGTTGTGATG AAGATATTGA GGGATCAGGC AGTGCTGTCG CTGTATCTGC CGACAAAAGT ACCTGTCAAG ATTGCCTAAA CGATATGCAT AACCCCGAGG ATCGCCACTT CGGTTATGCC TTTACCAACT GCACTAATTG TGGCCCAAGA TACACTATTA TCAATGCGTT ACCCTATGAT AGACACAACA CGGCTATGGC TGATTTTGTC ATGTGTCCAG ATTGTGCAAA ATCGTACTAC GATCCGCTCG ATCGCCGTTA TCATGCCCAA CCCGTAAGCT GCCCGAACTG TGGTCCTCAA CTCTATTTAA AAACACCACA GGGAGAAGAT ATTACGCCAG TTAACGTCAC ACAGCAGACT GTGTTACAAC TGGCGGCCAA TAGATTAGCC CAAGGGCAAA TTCTGGCGAT TAAAGGATTA GGTGGGTTTC ATTTAGTATG CGATGCACGC CATACTGGGG CTGTCACAGC ACTTCGCCAA CGTAAACAGC GTCAAGCAAA GCCCTTAGCG GTCATGGTGG CCAATATTGC GATGGCGCAG CGATATGTGA CGGGTACGGA GGCTGAATGG CAAGTGCTCA GTTCACAGGA ACGCCCCATC GTACTGATGA ATAGCATACC CGCAAACGAT CTTAGCATTG AAGTCGCCCC TAATCTGGAC AAACTCGGGG TATTCTTACC TTATACCCCA CTGCATCATT TGCTGTTAGC TCTCTTCAAT GGACCCTTGG TCGCCACAAG TGCCAATGTA TCGGGTGAAC CTATCATCAC CCACTGTGAT GAGTTAGTGA GTCACCTGAG TCATGTTGTA GATGCCATAG TCGATCATAA TCGCCCTATT ATTAACGGCT GCGATGACAG TGTTGTACAA GTCATCCAAC CTCGAACACA TGACACGGCC CCTTATCTTA TACCGCCAAG TGTACAAGTA CTGCGCCTCG CTCGGGGATT TGCTCCAGCC AGTTTTTCCC TAACAACACC TTTGACTCAA TCGATTCTTG CCGTTGGTGC ACAACAAAAA AATGCGATTG CCTTCGGTTT TGGCTCGAAT GTTTTTTTAA GCCCACATAT TGGCGATCTC TTTAGTGTCA GTGCTGAGCA GTATTTTGAA CGTACATTAA CCACCTTCTC TCGCCTATAT CACTTTGAAC CTAAATGGAT TATTTGTGAT AAACATCCAG ACTACGCGCC TTCTCGTTGG GCGCAGGCTA ATAGTGTCTT AGATGCTAAT GACGCCATAG ATACAAGCCA ACAACGCAAA TGTTTCTCGG TGCAGCATCA CCATGCCCAT GTATTGAGTG TGATGGCAAT TAATCAATAT CGCGATCCCG TTCTCGGCTT TAGCTTCGAT GGGACAGGAC TTGGGGAAGA TGGCCGTTTA TGGGGCGGCG AAGTGCTATT AACCACGCTC GATAAAGCAG AACGGTTGGC TCACTTTGAG CCCATCGCCT TACTGGGTGG TGAGCAAGCG ATTAAACAGC CAGTAAGACT CTTATTAGCA CTCCTATTTG AACAAATGAG TCTAAGCGAG GTACTGGCTC TGCCATTACC TATACTAAGA TGCCTTAGTC CAAACACACT GACGAATTTA CATAAAATCT GGCAAAACGG CAGCGCAATA GAAAGCTCAT CCGTTGGACG TCTGTTTGAT GCCCTCGCCT GTGCGTTAGG GCTTATTGAA ACCACGCTAT TCGAAGGCCA AGCAGGGATG GCTATTGAAG CTGCAGCAAA TCGTGCCGAT ATGCTGGCAC TCGATCCGTT AATCCTCGAT CTTCCCTTCA GCGAGGGACA ATGGAACAGC AGTGCCATGT TCAAACAAAT TATTCAGTTA ATCACAGCGC AACCCTTAAC CGCTCACAGA CGCGACACGA TAGCCCGCGC CTTTTTACAT ACCCTAGGTG AAGCAATCTG TGTTTATGCC GCTAAATACA AACATCTTCC AACCGTACTT TGTGGTGGTG TTTTTCAAAA TAAATACCTG TTGGAATACT GCCTGAGTCA ACTCAGTGTC CAAGGTAATC AGGTATTATC TAGTCAGCAC ATCCCCATCA ATGATGGAGG GATAGCCCTT GGCCAACTGT GGTATGGGAT TCATCAAACC GATTGA
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Protein sequence | MEHVVLENQA LKRYKLHITG IVQGVGFRPF VYRYALDNQL TGTVLNNAQG VTIELQGNET GLELFLTALK SNPPPLARID QITQTLLPVI EGETLFAIIE SCDEDIEGSG SAVAVSADKS TCQDCLNDMH NPEDRHFGYA FTNCTNCGPR YTIINALPYD RHNTAMADFV MCPDCAKSYY DPLDRRYHAQ PVSCPNCGPQ LYLKTPQGED ITPVNVTQQT VLQLAANRLA QGQILAIKGL GGFHLVCDAR HTGAVTALRQ RKQRQAKPLA VMVANIAMAQ RYVTGTEAEW QVLSSQERPI VLMNSIPAND LSIEVAPNLD KLGVFLPYTP LHHLLLALFN GPLVATSANV SGEPIITHCD ELVSHLSHVV DAIVDHNRPI INGCDDSVVQ VIQPRTHDTA PYLIPPSVQV LRLARGFAPA SFSLTTPLTQ SILAVGAQQK NAIAFGFGSN VFLSPHIGDL FSVSAEQYFE RTLTTFSRLY HFEPKWIICD KHPDYAPSRW AQANSVLDAN DAIDTSQQRK CFSVQHHHAH VLSVMAINQY RDPVLGFSFD GTGLGEDGRL WGGEVLLTTL DKAERLAHFE PIALLGGEQA IKQPVRLLLA LLFEQMSLSE VLALPLPILR CLSPNTLTNL HKIWQNGSAI ESSSVGRLFD ALACALGLIE TTLFEGQAGM AIEAAANRAD MLALDPLILD LPFSEGQWNS SAMFKQIIQL ITAQPLTAHR RDTIARAFLH TLGEAICVYA AKYKHLPTVL CGGVFQNKYL LEYCLSQLSV QGNQVLSSQH IPINDGGIAL GQLWYGIHQT D
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