Gene Sputcn32_2093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSputcn32_2093 
Symbol 
ID5078298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella putrefaciens CN-32 
KingdomBacteria 
Replicon accessionNC_009438 
Strand
Start bp2396956 
End bp2399361 
Gene Length2406 bp 
Protein Length801 aa 
Translation table11 
GC content47% 
IMG OID640499255 
Product(NiFe) hydrogenase maturation protein HypF 
Protein accessionYP_001183613 
Protein GI146293189 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0068] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00143] [NiFe] hydrogenase maturation protein HypF 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAACATG TTGTCCTAGA GAACCAAGCG CTCAAGCGAT ATAAATTGCA TATTACAGGC 
ATAGTACAAG GGGTGGGGTT TCGCCCCTTT GTATATCGTT ACGCCCTTGA TAACCAACTA
ACGGGCACTG TACTCAATAA TGCCCAAGGT GTAACCATTG AGTTGCAGGG TAATGAGACT
GGTCTCGAAC TTTTTCTCAC CGCACTCAAA TCCAATCCAC CACCACTGGC GCGAATCGAT
CAGATAACTC AAACATTACT ACCCGTTATT GAAGGCGAAA CCCTATTTGC CATCATCGAA
AGTTGTGATG AAGATATTGA GGGATCAGGC AGTGCTGTCG CTGTATCTGC CGACAAAAGT
ACCTGTCAAG ATTGCCTAAA CGATATGCAT AACCCCGAGG ATCGCCACTT CGGTTATGCC
TTTACCAACT GCACTAATTG TGGCCCAAGA TACACTATTA TCAATGCGTT ACCCTATGAT
AGACACAACA CGGCTATGGC TGATTTTGTC ATGTGTCCAG ATTGTGCAAA ATCGTACTAC
GATCCGCTCG ATCGCCGTTA TCATGCCCAA CCCGTAAGCT GCCCGAACTG TGGTCCTCAA
CTCTATTTAA AAACACCACA GGGAGAAGAT ATTACGCCAG TTAACGTCAC ACAGCAGACT
GTGTTACAAC TGGCGGCCAA TAGATTAGCC CAAGGGCAAA TTCTGGCGAT TAAAGGATTA
GGTGGGTTTC ATTTAGTATG CGATGCACGC CATACTGGGG CTGTCACAGC ACTTCGCCAA
CGTAAACAGC GTCAAGCAAA GCCCTTAGCG GTCATGGTGG CCAATATTGC GATGGCGCAG
CGATATGTGA CGGGTACGGA GGCTGAATGG CAAGTGCTCA GTTCACAGGA ACGCCCCATC
GTACTGATGA ATAGCATACC CGCAAACGAT CTTAGCATTG AAGTCGCCCC TAATCTGGAC
AAACTCGGGG TATTCTTACC TTATACCCCA CTGCATCATT TGCTGTTAGC TCTCTTCAAT
GGACCCTTGG TCGCCACAAG TGCCAATGTA TCGGGTGAAC CTATCATCAC CCACTGTGAT
GAGTTAGTGA GTCACCTGAG TCATGTTGTA GATGCCATAG TCGATCATAA TCGCCCTATT
ATTAACGGCT GCGATGACAG TGTTGTACAA GTCATCCAAC CTCGAACACA TGACACGGCC
CCTTATCTTA TACCGCCAAG TGTACAAGTA CTGCGCCTCG CTCGGGGATT TGCTCCAGCC
AGTTTTTCCC TAACAACACC TTTGACTCAA TCGATTCTTG CCGTTGGTGC ACAACAAAAA
AATGCGATTG CCTTCGGTTT TGGCTCGAAT GTTTTTTTAA GCCCACATAT TGGCGATCTC
TTTAGTGTCA GTGCTGAGCA GTATTTTGAA CGTACATTAA CCACCTTCTC TCGCCTATAT
CACTTTGAAC CTAAATGGAT TATTTGTGAT AAACATCCAG ACTACGCGCC TTCTCGTTGG
GCGCAGGCTA ATAGTGTCTT AGATGCTAAT GACGCCATAG ATACAAGCCA ACAACGCAAA
TGTTTCTCGG TGCAGCATCA CCATGCCCAT GTATTGAGTG TGATGGCAAT TAATCAATAT
CGCGATCCCG TTCTCGGCTT TAGCTTCGAT GGGACAGGAC TTGGGGAAGA TGGCCGTTTA
TGGGGCGGCG AAGTGCTATT AACCACGCTC GATAAAGCAG AACGGTTGGC TCACTTTGAG
CCCATCGCCT TACTGGGTGG TGAGCAAGCG ATTAAACAGC CAGTAAGACT CTTATTAGCA
CTCCTATTTG AACAAATGAG TCTAAGCGAG GTACTGGCTC TGCCATTACC TATACTAAGA
TGCCTTAGTC CAAACACACT GACGAATTTA CATAAAATCT GGCAAAACGG CAGCGCAATA
GAAAGCTCAT CCGTTGGACG TCTGTTTGAT GCCCTCGCCT GTGCGTTAGG GCTTATTGAA
ACCACGCTAT TCGAAGGCCA AGCAGGGATG GCTATTGAAG CTGCAGCAAA TCGTGCCGAT
ATGCTGGCAC TCGATCCGTT AATCCTCGAT CTTCCCTTCA GCGAGGGACA ATGGAACAGC
AGTGCCATGT TCAAACAAAT TATTCAGTTA ATCACAGCGC AACCCTTAAC CGCTCACAGA
CGCGACACGA TAGCCCGCGC CTTTTTACAT ACCCTAGGTG AAGCAATCTG TGTTTATGCC
GCTAAATACA AACATCTTCC AACCGTACTT TGTGGTGGTG TTTTTCAAAA TAAATACCTG
TTGGAATACT GCCTGAGTCA ACTCAGTGTC CAAGGTAATC AGGTATTATC TAGTCAGCAC
ATCCCCATCA ATGATGGAGG GATAGCCCTT GGCCAACTGT GGTATGGGAT TCATCAAACC
GATTGA
 
Protein sequence
MEHVVLENQA LKRYKLHITG IVQGVGFRPF VYRYALDNQL TGTVLNNAQG VTIELQGNET 
GLELFLTALK SNPPPLARID QITQTLLPVI EGETLFAIIE SCDEDIEGSG SAVAVSADKS
TCQDCLNDMH NPEDRHFGYA FTNCTNCGPR YTIINALPYD RHNTAMADFV MCPDCAKSYY
DPLDRRYHAQ PVSCPNCGPQ LYLKTPQGED ITPVNVTQQT VLQLAANRLA QGQILAIKGL
GGFHLVCDAR HTGAVTALRQ RKQRQAKPLA VMVANIAMAQ RYVTGTEAEW QVLSSQERPI
VLMNSIPAND LSIEVAPNLD KLGVFLPYTP LHHLLLALFN GPLVATSANV SGEPIITHCD
ELVSHLSHVV DAIVDHNRPI INGCDDSVVQ VIQPRTHDTA PYLIPPSVQV LRLARGFAPA
SFSLTTPLTQ SILAVGAQQK NAIAFGFGSN VFLSPHIGDL FSVSAEQYFE RTLTTFSRLY
HFEPKWIICD KHPDYAPSRW AQANSVLDAN DAIDTSQQRK CFSVQHHHAH VLSVMAINQY
RDPVLGFSFD GTGLGEDGRL WGGEVLLTTL DKAERLAHFE PIALLGGEQA IKQPVRLLLA
LLFEQMSLSE VLALPLPILR CLSPNTLTNL HKIWQNGSAI ESSSVGRLFD ALACALGLIE
TTLFEGQAGM AIEAAANRAD MLALDPLILD LPFSEGQWNS SAMFKQIIQL ITAQPLTAHR
RDTIARAFLH TLGEAICVYA AKYKHLPTVL CGGVFQNKYL LEYCLSQLSV QGNQVLSSQH
IPINDGGIAL GQLWYGIHQT D