| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_2409 |
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| Symbol | |
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| ID | 7089372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 2881115 |
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| End bp | 2883637 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643461303 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_002358327 |
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| Protein GI | 217973576 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0878931 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000263976 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCCATGA TTAGGAGGCC AAAAGTTAAG TCACAACGCA TGCAGCCACA TAGACATAAT
AGTCGCCACA AAAAGCACAG TGATCTGCAG ATAAAGCGCA GGCTGGCATT GGAATACCTT
GTCCACAAGG GCGCCGCGCT AAAGCGTTGT CAGCTGCAGA TCACTGGCAT AGTGCAAGGG
GTGGGATTTC GCCCCTTTGT CTATCGTTAT GCCCTTGAAT TTCAACTAAC AGGTACTGTG
CTCAACAGTG CCAAGGGCGT GACCATTGAG CTGCAAGGCA CGGAAGAAAA CCTCACGCAA
TTTATCACAA CGCTCAATAC CACCCCGCCG CCACTGGCCC GTATCGACAA TATCACCCAA
ACATCGCTGC CGATTTTGCT AAGCGAAACC ACATTTGAAA TTATAAAAAG CGACAGCCAT
GAGGACGATG ACCCAAGTTC ACCGATAGGC GCGCAGGTGG CAGTATCGGC GGATAAAAGT
ACCTGCCAAG ATTGCTTGAA CGACATGCAT AATCCTGATG ATCGCCACTT TGGCTATGCT
TTTACCAACT GCACAAATTG CGGCCCAAGA TACACCATAA TCAATGCCTT ACCTTATGAT
CGCCACAGTA CCGCCATGGC CGATTTTGAC ATGTGCCCCG AGTGCGCCAA AGCATATCAA
AACCCACTCG ATCGCCGCTA TCATGCCCAG CCTGTCAGTT GCCCAGTTTG TGGCCCCAGA
CTCAGTTTAA AAACACCCCA AGGGGAATAC ATCATTCCCA ATACCTCTAA TTTCAGCACA
CCTGAATTGA GTACGGATTT GGCGGTACTA AAAGCGGCGG CTAACAGATT ACACCAAGGG
CAGATTCTGG CAATTAAGGG ACTGGGCGGA TTTCACTTAA TCTGTGATGC CCGTAACGAC
AAAGCAGTCA ACACTCTTAG GCTGCGAAAA CAGCGCCAAG CCAAGCCGCT AGCTGTGATG
ATGGCGGATA TCCAGATGGC GCAGCACTAT GTCACAGGTA CGGATGCCGA GTGGCAAGTG
CTGAGTTCAC AGGAGCGGCC CATAGTGCTG ATGAGCAGTC GCCCCGAACA TGAACTCAGC
TTAGCTGTCG CCCCAAATTT GAATAAACTC GGGGTATTTT TGCCCTACAC ACCACTGCAT
CATTTACTGT TAGGTCTCTT CAAAGGGCCA TTAGTTGCAA CCAGCGCCAA TGTGTCAGGT
GAGCCTATCA TCACAGATTG TGATGAGCTT ATTCACCACT TAAGCCATGT GGTGGATGCG
ATAGTTGACC ATAATCGGCC GATTATTAAT GGCTGTGATG ACAGTGTGGT GCAGGTGATT
CAGCCCCACA TGGATTCGCC TGCAGAGGTG CAAGTACTGC GTCTCGCCCG TGGTTATGCG
CCGTTAAGTT TTCCCTTAGA GATACCGCTG TCCCAATCAA TTTTGGCCGT GGGTGCACAA
CAAAAAAATG CCATCGCCCT AGGCTTTGGC AACAATGTGT TTTTAAGTCC CCATATTGGC
GATTTATTCA GTGTCAGCGC CGAGCACTAT TTTGAGCGCA CCTTAGCGAC CTTCGCGCGG
CTGTATAACT TTGCGCCCAA TCTCATTGTT CGCGATAAAC ACCCAGATTA TGCCCCCTCA
CGCTGGGCTG AAATGCACTC AAACTCGAGC ACAGAACTGC GCAATAGCAG CCAAAGCCAA
TGTTTAACGG TACAACATCA CCATGCCCAT GTGCTCAGCG TAATGGCGGT TAACCAATAT
CGAGATCCCG TATTGGGCTT TAGTTTTGAT GGCACTGGGC TTGGCAACGA TGGCAGTTTA
TGGGGCGGTG AAGTGCTATT AACCACACTG GATAAAGCGC AGCGACTGGC TCATTTTGAG
CCCATAGCAC TACTGGGCGG CGAACAAGCC ATTAAGCAGC CTGTGAGGTT ATTACTGGCA
TTATTGTTCG AGCAAATGAG CCTTGATGCT GTGATCGCGC TGAACTTGCC CATTATCTGC
AGCATGAGCC CAAATACCTT AACTAATTTA TATAAAATTT GGCAGAACGG CAGCGCACTT
AAAAGCTCAT CGGTCGGACG CTTGTTCGAT GCCCTCGCCT GCGCCTTAGG CTTAATCGAA
ACCACACAAT TTGAAGGTCA AGCAGGCATG GCAATAGAAG CCGCAGCCAA TCGCGCCGAT
GCATTAGCCC TTGAAGCCAT TAAGCTTAAC TTACCTCTTG ACGTCGACCA GTGGCGCAGC
AGTGAGATGT TCAAGCAGAT TGTTGAATTA ATATCTGAAA AACCGCTAAC GGACAACAGA
CGAGATGCCA TCGCCCGCGC CTTTTTACAC ACATTAGGCG ATGCTATCTG CGACTATGCC
GCCCAGTACA AACACCTCCC AACCGTGCTC TGCGGCGGCG TATTCCAAAA TAAATACCTA
TTGGAATACT GCCTGAGCAA AATCTGCGCC CAAGGCAATA AAGTGTTATC CAGTCAACAG
ATCCCCATCA ATGATGGCGG CATCGCCCTA GGCCAACTCT GGTATGGGAT GCATAGAAAC
TAA
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| Protein sequence | MPMIRRPKVK SQRMQPHRHN SRHKKHSDLQ IKRRLALEYL VHKGAALKRC QLQITGIVQG
VGFRPFVYRY ALEFQLTGTV LNSAKGVTIE LQGTEENLTQ FITTLNTTPP PLARIDNITQ
TSLPILLSET TFEIIKSDSH EDDDPSSPIG AQVAVSADKS TCQDCLNDMH NPDDRHFGYA
FTNCTNCGPR YTIINALPYD RHSTAMADFD MCPECAKAYQ NPLDRRYHAQ PVSCPVCGPR
LSLKTPQGEY IIPNTSNFST PELSTDLAVL KAAANRLHQG QILAIKGLGG FHLICDARND
KAVNTLRLRK QRQAKPLAVM MADIQMAQHY VTGTDAEWQV LSSQERPIVL MSSRPEHELS
LAVAPNLNKL GVFLPYTPLH HLLLGLFKGP LVATSANVSG EPIITDCDEL IHHLSHVVDA
IVDHNRPIIN GCDDSVVQVI QPHMDSPAEV QVLRLARGYA PLSFPLEIPL SQSILAVGAQ
QKNAIALGFG NNVFLSPHIG DLFSVSAEHY FERTLATFAR LYNFAPNLIV RDKHPDYAPS
RWAEMHSNSS TELRNSSQSQ CLTVQHHHAH VLSVMAVNQY RDPVLGFSFD GTGLGNDGSL
WGGEVLLTTL DKAQRLAHFE PIALLGGEQA IKQPVRLLLA LLFEQMSLDA VIALNLPIIC
SMSPNTLTNL YKIWQNGSAL KSSSVGRLFD ALACALGLIE TTQFEGQAGM AIEAAANRAD
ALALEAIKLN LPLDVDQWRS SEMFKQIVEL ISEKPLTDNR RDAIARAFLH TLGDAICDYA
AQYKHLPTVL CGGVFQNKYL LEYCLSKICA QGNKVLSSQQ IPINDGGIAL GQLWYGMHRN
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