Gene Rfer_4097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRfer_4097 
Symbol 
ID3961795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodoferax ferrireducens T118 
KingdomBacteria 
Replicon accessionNC_007908 
Strand
Start bp4570277 
End bp4572646 
Gene Length2370 bp 
Protein Length789 aa 
Translation table11 
GC content65% 
IMG OID637918921 
Product(NiFe) hydrogenase maturation protein HypF 
Protein accessionYP_525326 
Protein GI89902855 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0068] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00143] [NiFe] hydrogenase maturation protein HypF 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACGACTG CGTTGCCACT CGTTGCGCGT CACATCCGGG TCAGCGGCAT TGTTCAAGGG 
GTCGGATTCC GGCCTTTTGT CTGGCGCCTG GCGCAGGAAC TCAAGCTCAC CGGCTGGGTG
CGCAATGACG CCCAGGGCGT CGAGATGGCT GCCCAGGGCG CTGAGCCCCA AGTTGCCGAA
CTGTTGCAAC GTCTGCGCAC GGATGCGCCG CCGTTGGCGC GAGTTGATGC GGTGCAGGCG
CGTGAGGCTT TGGTAGAAGA CTGGGCCGGT TTCTCCATCA TCGACAGCAT CCAGGGCCGC
GCCGTCACGG CCATTGGCCC GGATGTTGCC GTCTGCGCCG ATTGCCTGAA CGAGCTGTTT
GACCCCACGA ACAGGCGCTG GCGCCATGCT TTCATCACCT GCACGCATTG CGGCCCCCGC
TTCACGGTGA CCCGCGCCTT GCCTTACGAC CGGCCGCAGA CCAGCATGGC AGCGTTCCCG
CTGTGCCCGG CCTGTGGCGC TGAATACAGG GCAGCGGCGG ATCGGCGTTT TCATGCCGAG
ACCACCTGTT GCCCGCAATG CGGCCCCACG CTGGCGTTGC TGGATGCGCA GCACCAGACG
ATTCAAGGCG ATCCGATTGA ACGCACCTTG CACCTGCTGC AAAACGGGAA AATCGTGGCC
ATCAAGGGGC TGGGCGGTTT TCACCTGGCT TGTGATGCGC GCAACCCGGA GGCGGTGGCG
CGGCTTCGGT TCACCAAGAA CCGCGAAGAA AAACCCTTTG CCGTGATGCT GGCCAACGTC
GCCAGCCTGG CGCCTTATGC GCAGGTATCG GATGCAGAGC GTGCTCTGCT GGAAAGCCGT
GAGCGCCCCA TCGTGCTGCT GCGCGCGCGG CCAGGTGGCG ATGCCGCCTT GTGTGGTGTG
GCGCCGGGCC TGCTGTGGCT GGGTGTGATG CTGCCCACGA CGCCGATCCA CTTCTTGCTG
TTGCATGAGG CCGCCGGCCG ACCTGCGGGC AGCGCCTGGA CCAACAAGCC GCAGGCCATG
GTGCTGGTGA TGACCAGCGC CAACCCGGGT GGTGAGCCCA TCGTGCGCGA TATGGCAGAG
GCGCGCACGC GTCTGGTTGG CATTGCCGAC GCCTATCTGG ACCACGACCG CGACATCGTG
GCGCGCTGCG ACGACAGCGT GGTGCGCCCG CTGGGACCGG GAGCGCAGTT CATCCGGCGC
AGCCGGGGTT ACGCGCCTGT CGCCATTCGC TTGCCACACG CGGGGCCATC CGGGCTTTCC
CGGCCTTGCG TGCTGGCGTT TGGCGCCCAC CTCAAAAACA CGGTGTGCGT GACCCGTGGC
GATGAAGCTT TTTTGTCGCC TCACATTGGC GACCTGGACA ACGCCGCAAG CTGTGACTTC
CTGAACGAGA CGGTGCAGCG CCTGTGCGAT CTGATCGACG TCAAGCCGGC GGTCGTCGCG
CACGACCTGC ACCCCGACGA CTACAGCACA CGCGCTGCCC TTGAATTTGC CGATCGCCAT
GGGCTGCCCA CGCTGGCTGT GCAGCATCAC CACGCCCACA TTGCCGCCGT GTGTGCCGAG
CACGGCTGGC AGGGCCCCGT GTTGGGGCTG GCGCTCGATG GTGTGGGCCT GGGGACCGAC
GGCAGCGCCT GGGGTGGTGA ATTGCTCAAG GTCGATGGGG CGCATTTCGA GCGCCTGGGC
CACCTGTCGC CCTTGGCCAT GCCGGGTGGC GACAGGTGCG CGCGTGAGCC CTGGCGCATG
GCGGCTTCGG TGCTGCATGA GTTGGGCCGC AACGCCGACA TCGTGGAGCG TTTTCAGGAG
CCCGGCGCAG ATACCGTGGC CGCCATGCTG CAGCGCCAGT TCAACAGCCC GCGCACGTCG
AGCATGGGCC GCGTGTTTGA TGCAGCAGCG GGTTTGCTGG GCCTCTGCTC TTATATGAAA
TATGAGGCTC AAGCCCCCGT GTTGCTTGAA CAGTGTGCTA CTCTTTTTAT AGATAACCAG
GGCTGGCCTG CCGCCATGGC TGAGGGCTGG ACGCTCAGTG ACCGGGGCCA ACTCAATCTG
CTGCCCGTTC TGGCATCACT CCTGGGTGCC AGCGACGTCA ACCAGGCCGC CGCCCGCTTT
CACGCGACCC TGGTGGCCGC CCTGACCGAC TGGGTGCTGC AAGCCTCAGC CGCCACCGGA
TTGCGCACCC TGGCGTGGGG TGGTGGCTGC TTTCTCAACA CCCTGCTATC GTCAGGTCTG
CGGCAAAATC TGGAACAAGG CGGCATCACC GTGCTGGCAC CGGTTCACAC GTCGCCGGGC
GATGGCAGCA TCGCGCTCGG GCAGGCCTGG ATCGCCTTGA ATTCTTTGGA GACTAAAGAT
GTGTCTTGCA CTACCGGTCA AAGTGATTGA
 
Protein sequence
MTTALPLVAR HIRVSGIVQG VGFRPFVWRL AQELKLTGWV RNDAQGVEMA AQGAEPQVAE 
LLQRLRTDAP PLARVDAVQA REALVEDWAG FSIIDSIQGR AVTAIGPDVA VCADCLNELF
DPTNRRWRHA FITCTHCGPR FTVTRALPYD RPQTSMAAFP LCPACGAEYR AAADRRFHAE
TTCCPQCGPT LALLDAQHQT IQGDPIERTL HLLQNGKIVA IKGLGGFHLA CDARNPEAVA
RLRFTKNREE KPFAVMLANV ASLAPYAQVS DAERALLESR ERPIVLLRAR PGGDAALCGV
APGLLWLGVM LPTTPIHFLL LHEAAGRPAG SAWTNKPQAM VLVMTSANPG GEPIVRDMAE
ARTRLVGIAD AYLDHDRDIV ARCDDSVVRP LGPGAQFIRR SRGYAPVAIR LPHAGPSGLS
RPCVLAFGAH LKNTVCVTRG DEAFLSPHIG DLDNAASCDF LNETVQRLCD LIDVKPAVVA
HDLHPDDYST RAALEFADRH GLPTLAVQHH HAHIAAVCAE HGWQGPVLGL ALDGVGLGTD
GSAWGGELLK VDGAHFERLG HLSPLAMPGG DRCAREPWRM AASVLHELGR NADIVERFQE
PGADTVAAML QRQFNSPRTS SMGRVFDAAA GLLGLCSYMK YEAQAPVLLE QCATLFIDNQ
GWPAAMAEGW TLSDRGQLNL LPVLASLLGA SDVNQAAARF HATLVAALTD WVLQASAATG
LRTLAWGGGC FLNTLLSSGL RQNLEQGGIT VLAPVHTSPG DGSIALGQAW IALNSLETKD
VSCTTGQSD