Gene Dtur_0080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtur_0080 
Symbol 
ID7082347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDictyoglomus turgidum DSM 6724 
KingdomBacteria 
Replicon accessionNC_011661 
Strand
Start bp78419 
End bp80644 
Gene Length2226 bp 
Protein Length741 aa 
Translation table11 
GC content34% 
IMG OID643457205 
Product(NiFe) hydrogenase maturation protein HypF 
Protein accessionYP_002352032 
Protein GI217966526 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0068] Hydrogenase maturation factor 
TIGRFAM ID[TIGR00057] Sua5/YciO/YrdC/YwlC family protein
[TIGR00143] [NiFe] hydrogenase maturation protein HypF 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.442925 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCT ATAAATTAAG AATTTGGGGG ATTGTTCAAG GAGTTGGTTT TAGACCCTTT 
ATCTATAGAC TTGCCAAAAG TCTAAACCTT AAGGGATGGG TTCTAAACTC CACAGGATCA
GTACAGATAC TCATTCAAGG AGAAGAAGAA AATATTGAAA AATTCATGGA ACTAATTATA
AAAGAGGCGC CTCCTTTATC AAGGATTGAA AGAATAGAAA AGGAAGAAGT AAATTCCGAA
GAATTAGAAG ATTTTAAAAT TCTTGAAAGT AAAGAGGATA CAGGTTTTAA CTTCATATCT
CCTGATATTG CCATATGTGA AGACTGTCTA AGGGAAATGA GAGATCCCAA AGACAGAAGA
TATAAATATC CTTTTATAAA CTGCACCAAT TGTGGTCCCC GATATACCAT AATAGAAGAT
CTTCCTTATG ACAGAGAAAA AACCACCATG AAGATCTTTG AAATGTGTGA AGAGTGCAAA
AAAGAATATC ATAATCCTTC TTCAAGAAGA TTTCATGCCC AACCCATATC CTGCTATGAC
TGTGGACCCA AAATTTGGAT TCATGGAGAT AAAGATAAGG ATATCTTTGA AAAAATAGCA
AAATATCTTG AAGAAGGAAA AATTCTCGCC ATAAAAGGCA TGGGAGGATT CCATCTTGCC
TGTGATGCTA CAAAAGAAGA CATAGTGAAA AGATTAAGAG AAAGAAAAAA AAGACCCTCA
AAACCTTTTG CCCTCATGAT GAAAGACATA GAAATGATAA AAGAATACTG CTTTGTAAGT
AAAGAGGAAG AAAAAATATT AAAATCCAAA GAAGCTCCTA TTGTGCTCTT AAGGACGAGA
GAATTAAAAG ATATATCTCC TCTTGTGGCC CCTGGAAACA AATACTTAGG AGTTATGCTT
CCCTATACTC CTTACCATCA TTTAATTTTT GATTATTTCA AAAAGCCCAT TATTATGACC
AGTGGAAATT TATCCGACGA ACCCATAGCA AAAGACAATG AGGAAGCTAT GGAGAGATTA
AAAAATATCG CGGATGTATT CGTACTTCAC AACAGAAATA TTAAGCATCG TATAGATGAT
AGCGTAGTAT TTGTGGAAAA CAAAGAAATA CAAATTATAA GAAGAGCAAG AGGATATGCC
CCAGACCCTA TTAAAATTCC CATAAAAATA AAGCCTACCC TTGCCCTTGG AGGAGAACTA
AAAAATACTT TCTCCTTAGG AAAGGAGAAC TACATATTTA TAAGTCCTCA TATAGGGGAT
CTCAAGGATA AAGAAACCTT AGAAGTTTAC GAAGAGACTA TACAAGAGTA CATAAGACTT
TTTAAGATCG AGCCAGAACT ATTGGTACAT GATCTTCATC CCCAATATCT TTCTACGGAT
TTAGCCCAGA GTTTTAAAAA ATATATGGAG GTAAAGTCAA TTCAACACCA CAAAGCCCAT
TTCTATTCCC TTCTCCTTGA TAGAGGAATC ACCAAAGATA TAATTTGCTT TACTTTTGAT
GGAACAGGAT ATGGGGAAGA CGGAAAAATA TGGGGAGGCG AAGTATTTGT AGGAAATATA
GAGGGAGTAA AAAGGGTCGC CCACTTTAAA TACTTTCCTA TTGTGGGAGG AGATAGCGCC
ATAGAAAATC CAAGAAAAAT TGCCCTATCA TACATACTTA AATATTTTCC TAAGGATGCA
GATAAAATAA TTTCTATGGA TGATTTTGAA AAGAATTTAA TTAAAATACT CCTTGAAAGG
GAAGAAAATA TATTTTACAC ATCCTCTTGT GGAAGAATCT TCGACCTTAT ATCTGCCCTC
TTAGGAATAA GAGAAAAAAT TGACTATGAA GGACAAGCGG CAATTGAGTT AGAAATGCAT
GCCATGGAAT CCTATGAAGA AGGTTATTAT CCTTTTAAAA TTATCGAAAA CGAAATCCTT
GAAATTGATA TTTTGCCAAT GATTGAGAAA ATCGTAGAAG AAAAAACCAA AAAAGATAAA
AGAGATATTG CAAGAAAATT TCACAACACC ATCTCTCAAA TAATAATTAC CCTTTCAGAA
ATACTTAGAG AAGAATATAA CATAAATAAG GTTGGATTTT CAGGAGGAGT TTTTCAAAAT
AGACTCCTTT TACAAACCAC TATTCCTGCC TTAAAAGAAA GCAAATTTGA AGTATATACC
CACCAAAAAG TTCCCACAAA TGATGGGGGA GTTTCCTTAG GACAAACTAT TATGGGATAT
AAATAA
 
Protein sequence
MKTYKLRIWG IVQGVGFRPF IYRLAKSLNL KGWVLNSTGS VQILIQGEEE NIEKFMELII 
KEAPPLSRIE RIEKEEVNSE ELEDFKILES KEDTGFNFIS PDIAICEDCL REMRDPKDRR
YKYPFINCTN CGPRYTIIED LPYDREKTTM KIFEMCEECK KEYHNPSSRR FHAQPISCYD
CGPKIWIHGD KDKDIFEKIA KYLEEGKILA IKGMGGFHLA CDATKEDIVK RLRERKKRPS
KPFALMMKDI EMIKEYCFVS KEEEKILKSK EAPIVLLRTR ELKDISPLVA PGNKYLGVML
PYTPYHHLIF DYFKKPIIMT SGNLSDEPIA KDNEEAMERL KNIADVFVLH NRNIKHRIDD
SVVFVENKEI QIIRRARGYA PDPIKIPIKI KPTLALGGEL KNTFSLGKEN YIFISPHIGD
LKDKETLEVY EETIQEYIRL FKIEPELLVH DLHPQYLSTD LAQSFKKYME VKSIQHHKAH
FYSLLLDRGI TKDIICFTFD GTGYGEDGKI WGGEVFVGNI EGVKRVAHFK YFPIVGGDSA
IENPRKIALS YILKYFPKDA DKIISMDDFE KNLIKILLER EENIFYTSSC GRIFDLISAL
LGIREKIDYE GQAAIELEMH AMESYEEGYY PFKIIENEIL EIDILPMIEK IVEEKTKKDK
RDIARKFHNT ISQIIITLSE ILREEYNINK VGFSGGVFQN RLLLQTTIPA LKESKFEVYT
HQKVPTNDGG VSLGQTIMGY K