| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1240 |
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| Symbol | |
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| ID | 5131593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 1220299 |
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| End bp | 1222590 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640530166 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_001214697 |
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| Protein GI | 147669879 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCGCAC CTAAACAAAC CAAACGGTTT GCCTTCACAC TTAGCGGTGT TGTCCAAGGG
GTGGGTTTCC GCCCGTTTGT TTACCAGCTG GCCGCCAAAC ACCGCTTAGC CGGCTGGGTC
AGAAATACCT CCGCCGGAGT GGAGATTGAG GCAGAAGGTG CAAGGCAGGC ACTGAACGCC
TTTTCAGAAG AATTGACCAG TCTTAATCCG CCTCAGTCAG TTATAAAAAC ATTCAAACAG
ACTGAAATAC CTTTAACAGG CGAAGAAGGG TTTGAAATCA AACCCAGCCA GAGCCTTGCA
GGCCGCTTTC AGCTGGTCTC ACCGGATATA GCCACCTGCA CCGAGTGCCA AAAGGATATC
TTTGCCCCCC GAAACCGCCG TTACCGCTAC CCCTTTACCA ACTGTACCAA CTGCGGACCC
CGTTTTACTA TCATCGAAGA TATACCCTAT GACAGACCCC TGACCACCAT GAAGAACTTT
AAAATGTGCC CTGACTGTCA GGCCGAATAT GACAACCCTT TGAACCGCCG TTTTCATGCC
CAGCCGAATG CCTGCCCGAT ATGCGGCCCC CGCCTCTGGC TGGCCGACAA AACCGGTACA
GAGCTTTCAA ATACCGATAC CATAGCAGAA GCCGCAAAAC TGCTTCAAGA CGGTCAAATT
TTAGCTATAC GGGGTCTGGG GGGCTTTCTG CTGGCCGCCG ACGCTACCAA TCCACAGGCC
GTAGCCGCCC TTAGAAACCG CAAGCACCGC CCTTCAAAAC CCTTTGCGGT TATGCTGGCA
AATCTGGAAG AAGCCCGAAA ATACTGTTCC ATATCCAAAG AAGAAGAAAA CCTCCTGGTT
TCACCCGCCG CACCCATAGT CCTTTGCAGG TGGAACAAAG AAAGCCCCGT TTGCCCTGAA
ACTGCCCCCG GTCAAAATTA TCTGGGAATT ATGCTCTCTT ACACCCCTCT CCACCATTTA
CTTCTTAAGG AAATAAACAA ACCCCTTGTC ATGACCAGCG GCAATCTGAG TGAAGAGCCC
ATTGCCAAAG ACAATGACGA AGCCCTGAAA AGGCTCTGCA ATATCGCGGA TTATTTTCTG
CTCCACAACC GTCCCATCTA CTCCCGTTAT GATGACAGCG TGGTCATGTA TGAAGCAGGC
GAAAAGAGGG TGCTCAGACG GGCCAGAGGC TACGCCCCCT ACCCTGTCCA GACCCATTTC
AAGGGCAAGG AAGTACTGGC CATGGGGCCG CAGGAAAAGA ACACTTTCTG CCTGCTGAAA
GACGGTTACG CCTTTGTCAG CCAGCATATA GGGGACATGC AAAACCCGGA AACACTGGAC
AGCTTTGAAG AAACGCTGGC GGTGTACTTG AAACTGTTCC GCTCAAAACC TGAAATAATA
GCCGCCGACC TGCACCCCGG TTACATCGCC ACCGCTCTGG CCGAAGAATG GTCTGACAGG
CTTGACATAC CTCTGGTCAA AGTCCAGCAC CACCATGCCC ATATTGCATC CTGTCTGGCT
GAACACGGCT GTGACGATGA GGTTATAGGG GTGGCTCTGG ACGGCACGGG TTACGGTCTG
GACGGGAATA TCTGGGGCGG GGAATTTTTC TGCGGAGGTA TAAAACAGGG ATTTAGCCGC
CAAGCCCATC TAGAATATTT GCCGCTGGCC GGAGGCGAAG CCGCCATCAA AAAGCCTTAC
CGCACAGCGG TGTCATATGT CTATACCCTG CTGGGAGAAG AAGGCTTGGG CTTTTTTAAA
GATATAGACC CGGAAAAACT GGATATTATA AAAAGCCAGC TTAACAAAAA ACTGAATTCC
CCGCTCACTT CCAGTACCGG CAGGCTGTTT GATGCGGTTG CCGCCCTGTG CGGAATCTGC
CGGGTGGCCA ACTATGACTC ACAGCCGGCC ATAGAGCTGG AAGCCGAGGC AAAAGATACT
GAATTTGCCC AGTTCTACCC CTTTGAGTTA GACTTAGACA AGGGCATTTA CCTGATTCGG
CTGAAAGGTA TACTGGAAGG TGTGCTTTCG GACCTCAAAT CAGGCAAAAC AGCCGCTTAT
ATATCGGTAA AATTTCACAA TACTGTCAGC CAAATAGTTC TGGACACCTG CCGCAAGCTT
TCAGCCGAAA GCGGGCTTAC AAAAGTAGCT CTTTCAGGCG GGGTTTTCCA GAACAGACGG
CTTTTCCGGC AGGTGATACA ACAGCTGGAA ACAGAGGGGT TTAAAGTGCT TACCCACAAG
GAAATCCCCT CTAATGACGG CTGTATATCA CTGGGTCAGG CGGTAATAGC CGCCAACCAA
GGAGGATTAT AA
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| Protein sequence | MPAPKQTKRF AFTLSGVVQG VGFRPFVYQL AAKHRLAGWV RNTSAGVEIE AEGARQALNA
FSEELTSLNP PQSVIKTFKQ TEIPLTGEEG FEIKPSQSLA GRFQLVSPDI ATCTECQKDI
FAPRNRRYRY PFTNCTNCGP RFTIIEDIPY DRPLTTMKNF KMCPDCQAEY DNPLNRRFHA
QPNACPICGP RLWLADKTGT ELSNTDTIAE AAKLLQDGQI LAIRGLGGFL LAADATNPQA
VAALRNRKHR PSKPFAVMLA NLEEARKYCS ISKEEENLLV SPAAPIVLCR WNKESPVCPE
TAPGQNYLGI MLSYTPLHHL LLKEINKPLV MTSGNLSEEP IAKDNDEALK RLCNIADYFL
LHNRPIYSRY DDSVVMYEAG EKRVLRRARG YAPYPVQTHF KGKEVLAMGP QEKNTFCLLK
DGYAFVSQHI GDMQNPETLD SFEETLAVYL KLFRSKPEII AADLHPGYIA TALAEEWSDR
LDIPLVKVQH HHAHIASCLA EHGCDDEVIG VALDGTGYGL DGNIWGGEFF CGGIKQGFSR
QAHLEYLPLA GGEAAIKKPY RTAVSYVYTL LGEEGLGFFK DIDPEKLDII KSQLNKKLNS
PLTSSTGRLF DAVAALCGIC RVANYDSQPA IELEAEAKDT EFAQFYPFEL DLDKGIYLIR
LKGILEGVLS DLKSGKTAAY ISVKFHNTVS QIVLDTCRKL SAESGLTKVA LSGGVFQNRR
LFRQVIQQLE TEGFKVLTHK EIPSNDGCIS LGQAVIAANQ GGL
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