| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Svir_07990 |
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| Symbol | |
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| ID | 8386136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Saccharomonospora viridis DSM 43017 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013159 |
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| Strand | + |
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| Start bp | 819628 |
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| End bp | 821916 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644974890 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_003132686 |
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| Protein GI | 257054854 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.442936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAGTCGG GTGAGGGCGT CGTCGGCCCG GTCCGGCGTG TCGAGATCCG GGTCGAGGGC
GTGGTGCAGG GTGTCGGGTT CCGCCCGTTC GTGTACGGCT TGGCGGAGCG GTTCGGACTG
AACGGGCGGG TCGGCAACGA CACCGGTGGT GTGGTCATCG ACGTCGAGGG CCCGCGCGAG
GCGGTGGCCG GATTCCTGAA GTCCCTGGAG GTCGACGCCC CCGTCCTGGC GGACATCGAA
CGCGTCACCG TCGTGACGCG GCCACCGAGG GGGAGCATCG GGTTCCGCAT CGTCGACAGT
GACCACGGTG GTCCGCGACG GACACCGGTC CCCGCCGACT CCGCCACGTG CAAGAAGTGC
CTGGCGGAGC TGTTCGACCC CTGTGACCGC CGGTACCGGT ACCCGTTCCT CAACTGCACC
GACTGCGGTC CCCGGTTCAC CATCGTGCGG GACGTGCCCT ACGACCGCGG GAACACGACC
ATGGCCGAGT TCCCGATGTG TCCGGCGTGT GCCCGGGAGT ACCACGACCC CACCGACCGT
CGCTTCCACG CCCAACCCGT GTGCTGTCCC GACTGCGGGC CCCGACTGCG CATCGTGGAC
GCCCACGGCA GACCGTTGGG TGACGACCCC GTGGGGCGGG CCGTGGAGCT CCTGCGTGCG
GGGATGGTCG TCGCCGTCAA GGGGCTCGGT GGTTATCACG TGGCCGTCGA CGCCACCAAT
CCCCATGCGG TCGAGACCTT GCGAGCCCGC AAACGGCGCG CGGACAAACC GTTCGCCGTC
ATGGTGGCCA CGGTGGACGA GGCCCGGAGA CTGTGCGTCG TGGACGAGGC CGCCGAGCGG
GCCTTGACGG ATCGGCGCCG TCCCATCGTG TTGCTCGACC GCCGGGGGAA GGAGCTCGCC
GAGGCCGTCG CCCCCGGCAA TCGACAGCTG GGCGTGTTCC TGCCCTACAC CCCGTTGCAC
CACCTGTTGT CGGTCGAGTT CGGCGCACCG ATGGTGCTCA CCAGCGGTAA CGCCTCCGAC
GAGCCCATCG CGTTCACCGA CGCCGACGCA CTGTCGCGGT TGTCCGGCAT CGCCGACGCG
TTCCTCGTCC ACGATCGCCC CATCCACGCG TGGGCGGACG ATTCCGTGGT GCGTCCGTGG
CGGGACACGG TGGTGCCGGT GCGTCGTTCC CGGGGGTACA CGCCCGAACC CATCCGGTGC
GCCTGGGAGT TCCCCCGTCC GGTCCTGGCG GTCGGCGCGG AACTGAAGAA CACGGTGTGT
CTGGCGTCCG GATGTAGGGC GGTGCTGTCC CAGCACATCG GCGATCTCCG CAACCTCGAG
ACGTTCCGGG CGTTCACCGA CGCGATCGGA CACCTGTCGC GGCTGTCCGA CATCGTTCCG
GCCGTGGTGG CCCACGACCT GCACCCCGAT TACGTCTCCA CCAACTATGC CCTCGACTCG
ACCGGGGTGG ACCTGGTCGG GGTGCAGCAC CACCATGCCC ACGTGGCCGC GTGCCTCGCC
GAGAACGGGG TGGCCGGGCC GGCCATCGGG GTCGCGTTCG ACGGCACCGG CTACGGATCC
GACGGAACGG TGTGGGGTGG GGAGTTCCTG CTCGCGACGT TGTCCGGATT CCAGCGGGTC
GGTCATCTCG AAGTGGTGCC GATGCCGGGC GGTGAGGCGG CGGTACGGCA ACCGTGGCGT
ATGGCGGCCG CGTATCTGCG CGACGATCCG GACGCGTCCT CTCTCGCCGT GGCGCGACGG
CAGGGGCGGC GTTGGGAATG GCTGCGACGC CTGGTCGACT CCGGGTTGGG CACACCTGTC
ACGTCGAGCG TGGGAAGGCT GTTCGACGCG GTCGCCGCGA TCCTCGACAT CCGGGACACC
GTCACCTACG AGGGGCAGGC CGCGATCGAG TTGGAACAAC GCGCCGACCC AGGGTGCGTG
GACGGCTATC CCGTGGGGGT CTTCGAGGAC GCGGGCACGT TCGTCGTGGA CGGTCCCGGC
CTGGTGCGCG CCGTCGTCGA CGACCATCGG TGCGGTGTCG ACGTCGCGCT GGTGTCCGCG
CGGTTCCACA ACGGCCTCGC CGCGGCGGTG CACCGGACCT GCCTGAGCAT CGCCGAACGC
ACGGACGTGT GGACGGTGGC GTTGTCCGGA GGCGTGTTCG CCAACCGGCT CCTGCTCGAA
CGCACGGTGG AGGCACTGGA GGGGTCCGGG TTCACCGTGC TCACCCATTC CCGGGTCCCC
TGCAACGACG GCGGGATCAG TTTCGGCCAG GCGGTGGTGG CGGCGGCCCG TGACCGGTCC
TCCGACTGA
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| Protein sequence | MESGEGVVGP VRRVEIRVEG VVQGVGFRPF VYGLAERFGL NGRVGNDTGG VVIDVEGPRE
AVAGFLKSLE VDAPVLADIE RVTVVTRPPR GSIGFRIVDS DHGGPRRTPV PADSATCKKC
LAELFDPCDR RYRYPFLNCT DCGPRFTIVR DVPYDRGNTT MAEFPMCPAC AREYHDPTDR
RFHAQPVCCP DCGPRLRIVD AHGRPLGDDP VGRAVELLRA GMVVAVKGLG GYHVAVDATN
PHAVETLRAR KRRADKPFAV MVATVDEARR LCVVDEAAER ALTDRRRPIV LLDRRGKELA
EAVAPGNRQL GVFLPYTPLH HLLSVEFGAP MVLTSGNASD EPIAFTDADA LSRLSGIADA
FLVHDRPIHA WADDSVVRPW RDTVVPVRRS RGYTPEPIRC AWEFPRPVLA VGAELKNTVC
LASGCRAVLS QHIGDLRNLE TFRAFTDAIG HLSRLSDIVP AVVAHDLHPD YVSTNYALDS
TGVDLVGVQH HHAHVAACLA ENGVAGPAIG VAFDGTGYGS DGTVWGGEFL LATLSGFQRV
GHLEVVPMPG GEAAVRQPWR MAAAYLRDDP DASSLAVARR QGRRWEWLRR LVDSGLGTPV
TSSVGRLFDA VAAILDIRDT VTYEGQAAIE LEQRADPGCV DGYPVGVFED AGTFVVDGPG
LVRAVVDDHR CGVDVALVSA RFHNGLAAAV HRTCLSIAER TDVWTVALSG GVFANRLLLE
RTVEALEGSG FTVLTHSRVP CNDGGISFGQ AVVAAARDRS SD
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