Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0712 |
Symbol | hypF |
ID | 7134832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 637851 |
End bp | 640262 |
Gene Length | 2412 bp |
Protein Length | 803 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643529118 |
Product | [NiFe] hydrogenase maturation protein HypF |
Protein accession | YP_002425200 |
Protein GI | 218667633 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0068] Hydrogenase maturation factor |
TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCCC CCGCGGACCG GGTCGCAACC CTGGGCGAGG AAGTCCGGGT GCGCGGACTG GTTCAGGGCG TTGGGTTCCG TCCTGCGGTT TGGCGCATTG CCCGCGACTG CGGGTTGTCG GGCGATGTGT GCAACGATGG AGAAGGGGTG CTGATCCGGA TCTGGGGGCC TGCAACGGAG CGGGATCGAT TTTTGACCCG CCTGCGCGAC GAACACCCCC CCCTCGCGCG CATTGACGAG GTGGTCCGCG GATCTTTGCG CGAAGACCCT CCTGAGGGAC CTTTCGGGAT CAGTACCAGC CGCTCCGGGC ACGTACATAC GGGAGCGGTG CCGGACGCCG CTACCTGTCC CGCCTGCCTG GGGGAGATTT TCGACCCCTT CCATCGGCGT TATCGTTACC CTTTCACCAA TTGCACGCAC TGTGGTCCGC GTTTTTCGAT CCTCGAAGAC ATCCCCTATG ACCGCGCCCA TACCTCCATG GGCGTCTTTC CGCTCTGCAG GGATTGCCGT GCCGAATACG AAAATCCGGA AGACCGGCGC TTCCACGCGC AACCGGTGGC CTGCCATGCC TGCGGCCCGA AGGCCCGGCT CGTCCGGCTC GATGGCCACG CGGTCAGTGC CGACCGGTAT ACCCAACTGG ACGCGGTGGA CGCGGCGACC AACCTCCTCA AGTGTGGGGA AATCGTGCTC ATCAAAGGGC TCGGCGGTTT TCATCTCGCC TGCGATGCCA CGAATGACCG TGCGGTGTCC GGCTTGCGCC TGCGCAAACA CCGTCCCCAT AAGCCCCTGG CGTTGATGGC CAGGGATCTG GAGGTCGTGC GTCGCTATGC GCACGTGAGC CGCGCAGAGG AGAAGTTGCT GCAGTCTCAT CAGGCGCCCA TCGTGCTGCT GAACCGTCTG GACAACGACT CCCTGGCGCC CGGCATTGCG CCGGGGATGC GGCGGCTCGG GTTTATGCTG CCTTATACCC CCCTGCACCA TCTCCTGATG CGCCGGATGG ACCGACCGAT CGTCCTGACG AGCGGCAATC TCTCGGATGC TCCACAGGTC ACTGACGACG CGGCCGCCGT CCGGGCGCTG CGGGGAGTGA CCGACTGGAT GCTGACCCAT GACCGGGCGA TCATCAACCG CGTCGATGAT TCTGTGGTGC AGATGGCGGG AGACGACACC ATGATTCTGC GCCGGGGGCG TGGCTACGCG CCGGAGTCGT TGCCGCTGCC CGCGGGTTTC GGAGCGTCGC CGGACCTGCT GGCGCTGGGT GGGGAGCTCA AGAACACCTT CTGTCTGATC AAGGACGGAC AAGCCATCCT TTCCCAGCAC ATGGGCGATC TCGAACAGGC CGCGGTCTGG GACGACACTG TCCGGAATCT CGCCCTCTAC GCCCGGCTCT TCCAGCATGT GCCCAAGGCC GTCGTGGTGG ACCGCCATCC CGAATATCTG TCGCGCAAGT GGGGGGTGGA GATGGCGGAG GAGGGCGATC TCCCCCTGAT TTCCGTGCAA CACCATCACG CCCATATTGC CGCGGTCATG GCGGAACATG GCCTGCCGCT GGAACATCCG CCGGTCATCG CCCTGGCTCT GGACGGTATG GGTCTGGGCG ATGGGGGCGC TTGGTGGGGT TGTGAGTGCT TGCAGGTGAG TTACCGCGAA GTTCGCCACC TGGGTGGGTT GCGCCCTTCC GCCCTGCCGG GGGGTGGTCT CGCGATGCGT GAACCGTGGC GCAACGCCTT TGTACAGCTT GCGGACGCCT TCGGCTGGTC CGTGGCACGC CAACGATTCG CCGATCTGGC CATCGTGGAA TACCTTGTCG AAAAGCCGGT CGCACAGTTG TTGCACATGC GGGACAGGAA TATCTGCACG CCGCTCTGCA GTTCTGCCGG GCGGCTGTTT GACGCCGTCA GCGCGGTCTG TGGCCTGTGC ATGGACCGGG TGAGTCATGA AGGGCAGGCG GCCATGCTGC TGGAGGCATG CGTCGATCCG TCTATCATGG GGGACGCCTC GGAGCCGGGC TATCCTTTCG GCATCGCCGA AAGCGAAAAG GGCTTCATTC AAATGGATCC GCGAACCCTG TGGCAGCCTC TGCTGGGCGA TCTCCAGGGC GGGGTTCCGG TGGCGACCGT TGCCGCGCGC TTCCACAAAG GCTTCGCCGC CGGCTTGGCG CAGTTGCTCA GGGAGGCCCT GGGTGCTACG CCCTGGACGT CCACCGTCGC TTTATCCGGG GGTGTTTTTC AGAATCTGAC CCTGCTGCGG GCAACCCGGG AGGCTCTGGA ATCCCAGGGG CTGGAGGTTC TCATTCCGCA TCTGATCCCC GCCAATGACG GCGGCCTGGC TTTTGGGCAG GCTGTGGTGG CGGCCGCTCA AATCGTCGCT GGTCAACATC CTATTGCAGG AGGGCATGAG CCATGTGTCT AG
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Protein sequence | MNSPADRVAT LGEEVRVRGL VQGVGFRPAV WRIARDCGLS GDVCNDGEGV LIRIWGPATE RDRFLTRLRD EHPPLARIDE VVRGSLREDP PEGPFGISTS RSGHVHTGAV PDAATCPACL GEIFDPFHRR YRYPFTNCTH CGPRFSILED IPYDRAHTSM GVFPLCRDCR AEYENPEDRR FHAQPVACHA CGPKARLVRL DGHAVSADRY TQLDAVDAAT NLLKCGEIVL IKGLGGFHLA CDATNDRAVS GLRLRKHRPH KPLALMARDL EVVRRYAHVS RAEEKLLQSH QAPIVLLNRL DNDSLAPGIA PGMRRLGFML PYTPLHHLLM RRMDRPIVLT SGNLSDAPQV TDDAAAVRAL RGVTDWMLTH DRAIINRVDD SVVQMAGDDT MILRRGRGYA PESLPLPAGF GASPDLLALG GELKNTFCLI KDGQAILSQH MGDLEQAAVW DDTVRNLALY ARLFQHVPKA VVVDRHPEYL SRKWGVEMAE EGDLPLISVQ HHHAHIAAVM AEHGLPLEHP PVIALALDGM GLGDGGAWWG CECLQVSYRE VRHLGGLRPS ALPGGGLAMR EPWRNAFVQL ADAFGWSVAR QRFADLAIVE YLVEKPVAQL LHMRDRNICT PLCSSAGRLF DAVSAVCGLC MDRVSHEGQA AMLLEACVDP SIMGDASEPG YPFGIAESEK GFIQMDPRTL WQPLLGDLQG GVPVATVAAR FHKGFAAGLA QLLREALGAT PWTSTVALSG GVFQNLTLLR ATREALESQG LEVLIPHLIP ANDGGLAFGQ AVVAAAQIVA GQHPIAGGHE PCV
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