| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shel_00540 |
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| Symbol | |
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| ID | 8393946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Slackia heliotrinireducens DSM 20476 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013165 |
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| Strand | - |
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| Start bp | 72154 |
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| End bp | 74511 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644984828 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_003142478 |
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| Protein GI | 257062806 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.48639 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGACG CACTCGACAT AGAGGTCCAC GGCGTGGTGC AAGGCGTCGG CTTCCGGCCG
TTCGTCTACA AAGCCGCACG TCGGAACCTT ATTTCGGGCT GGGTGCTCAA CGCCACGTCC
GGCGTGTTCA TCCATGCCGA GGGCGAATCC GACCACGTGA ACTCCTTCGT CATGGAGCTT
TCGGAAAACG CCCCGGCGGC GGCCAATGTG AAGGAGATCC TGCTCAAGGA GGTGCCGCTG
GAAGGGTTCA CCACCTTCGA GATCCGCTTC TCCGAGGAAG AGGACGTGCC GGAAACCACG
CTGGTCTCCC CCGACCTCGC CACCTGCGAC GATTGCGTGG CCGAGCTGTT CGACCCCGCC
AACCGGCGCT ACCACTACCC CTTCATCAAC TGCACCAACT GCGGCCCGCG GTTCACCATC
ATCAACGGGC TGCCCTACGA CCGCGCCGCC ACGTCCATGG CGGGCTTTCC CATGTGCCCC
GACTGCGCCC GCGAATACGC CGACCCCGAG GACCGGCGGT TCCACGCGCA GCCCGACGCC
TGCTTCGACT GCGGGCCGCA CATCTATTGG CGCGCGTCCG GGTCCGACGA ACGCGAATGG
GGACTTGACC TGGCCTCGAG CGATGCGATT GTCGAACGTG CCGCCCAGTG TCTGCGTCAG
GGCCGCATCC TGGCCATCAA GGGCCTGGGC GGGTTCCACC TGGCTTGCGA TGCCGCCAAC
CCCGAGGCGC TGGCCGAGCT GCGGCGCCGC AAGCGCCGCG AGGGCAAGGC GTTCGCGGTC
ATGGTGCCGA ACCTGGATGC GGTGCGCGCG GTATGCCACG TGTCGAAGGC CGAAGAAGAC
CTGCTCACGG GCTCGGTTCG GCCCATCGTC CTGTTGAAGA AACGCGCCGA GGCCACCTTT
GCACCGGGGC TGTGCGACAA GCTGCCCGAG CTGGGCATCA TGCTGCCTTA CACCCCGCTG
CAGCACCTGC TGCTGGCGGC GTTCGGCGGC ATGCTGGTCA TGACCTCGGG CAACCTGCAC
GACGAGCCCA TCCAGACCGA CGACGAGGAA GCCTTCGCCA AGCTGGGCGG CATAGCCGAC
GCGTTCATCG GCAACGACCG CCCCATCGTG ACGCGCTTCG ACGACTCCGT GGTCCGCGTG
ATTCAGGTGG GCACGGCGGG CGACGCGCTG CAGATGGTGC GCCGCGCCCG CGGCTACGCG
CCCATGCCGG TGCCTCTGAA GCGTCACGCC GCCGAGGGGC AGAAGCTGGA CACGGTTTTT
GCAGCCGGGC CGGAGCAGAA GAACACGTTC TGCCTGCTCC GGGGCGAGGA CGCTTTCGTC
AGCCAGCACA TCGGCGACAT GGAGAACGCC GAAACCTTCG ACGCCTGGCT GGACGCCAAG
GCCCGATTCG AGCGGCTGTT CCAGGCGACG CCCGACCGCA TCGCCTACGA CTTGCACCCG
GAATACCTGG CCAGCAAGTG GGCCCTCGAG CAGGCGGCCG CTGGCGCCGC CGCCGAGCCG
GTGCAACACC ACCACGCGCA TATCGTCTCG GTCATGGCGG AAAACGACCT GACCGACGCC
GTGATCGGCG TGGCCTTCGA CGGCACGGGC TACGGCGTGG ACGGGCGCAT CTGGGGCGGC
GAGGTCATGA TGGCCAACCG CCAGGATTTC GAACGGTTCG CGAACTTCGC CTATGTGCCC
ATGCCGGGCG GAGCGGCCGC CGTCAAACAC CCCGACCGCA TGGCCTACGG CTTCCTTTGG
ACCTATGACC TGCTGGAACA TCCTGCGGCG CAACCGATGC TCGAAGCCAT GGGCCAGCAG
GCCGAACTGT GCGGCACCAT GATCGACCGC GGGCTGAACA CGCCCATGAC ATCCAGCGTC
GGCCGAATGT TCGACGCACT GAGCGCCATC TGCGGCGTGT GCACCGAGCC GCTTTACGAA
GGCGAAGCCG CCATTTTGTT CGAAGCCGCC ATGAACGGCG TGCAGACCGA CGAGGCATAC
GCCATCGATG TGGTGAAGAA CACCGCGGGT GAGGGAAGCA CCGCCCATAA CACCAGCGTG
GTGCTGTTCG ACGCCGAGCC GCTGTTCCGC GGCGTGCTGG ACGACCTGGC CGCAGGCGTG
GGAGTGGAGA CGATTTCCGC CAAGGCCCAC AACGCCTTGG TGGCAGCCGT GCTGCAGATC
TGCCTGGTAG CCAACGCCGC TTACGGAGTT TCCACCGTGG CGCTGGCCGG CGGCGTGTTC
ATGAACCGCT ATCTTATCGA GCACACCACC GCAGCCCTCG AATCCGCCGG ATTCACCATC
GCGATCAACC GCGAGCTGCC GCCCAACGAC GGCGGCATCG CGTACGGACA AGCCGCCGCC
GCGGCCGCCC GCCAGTAA
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| Protein sequence | MLDALDIEVH GVVQGVGFRP FVYKAARRNL ISGWVLNATS GVFIHAEGES DHVNSFVMEL
SENAPAAANV KEILLKEVPL EGFTTFEIRF SEEEDVPETT LVSPDLATCD DCVAELFDPA
NRRYHYPFIN CTNCGPRFTI INGLPYDRAA TSMAGFPMCP DCAREYADPE DRRFHAQPDA
CFDCGPHIYW RASGSDEREW GLDLASSDAI VERAAQCLRQ GRILAIKGLG GFHLACDAAN
PEALAELRRR KRREGKAFAV MVPNLDAVRA VCHVSKAEED LLTGSVRPIV LLKKRAEATF
APGLCDKLPE LGIMLPYTPL QHLLLAAFGG MLVMTSGNLH DEPIQTDDEE AFAKLGGIAD
AFIGNDRPIV TRFDDSVVRV IQVGTAGDAL QMVRRARGYA PMPVPLKRHA AEGQKLDTVF
AAGPEQKNTF CLLRGEDAFV SQHIGDMENA ETFDAWLDAK ARFERLFQAT PDRIAYDLHP
EYLASKWALE QAAAGAAAEP VQHHHAHIVS VMAENDLTDA VIGVAFDGTG YGVDGRIWGG
EVMMANRQDF ERFANFAYVP MPGGAAAVKH PDRMAYGFLW TYDLLEHPAA QPMLEAMGQQ
AELCGTMIDR GLNTPMTSSV GRMFDALSAI CGVCTEPLYE GEAAILFEAA MNGVQTDEAY
AIDVVKNTAG EGSTAHNTSV VLFDAEPLFR GVLDDLAAGV GVETISAKAH NALVAAVLQI
CLVANAAYGV STVALAGGVF MNRYLIEHTT AALESAGFTI AINRELPPND GGIAYGQAAA
AAARQ
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