| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_0119 |
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| Symbol | |
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| ID | 3738026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 144317 |
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| End bp | 146599 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637777398 |
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| Product | hydrogenase maturation protein HypF |
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| Protein accession | YP_383093 |
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| Protein GI | 78221346 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0111799 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATG CCAGGCGCAC CAGGATAACC ATTGAGGGGA TTGTCCAGGG GGTCGGCTTC
CGCCCCTTCG TCTTCCGCCT CGCGGAGCAC CACGGCATTG CCGGATGGGT GCAGAACACC
ACGGCGGGAG TTGTCGTTGA GGCGGAAGGG GATGCCCGGC GCCTCGCCTC CTTCGTGGCT
GACCTCACGG GGAAAGCCCC CCCTCTGGCT GTCATCGTTT CGCTTGCAAC CGAAGAGATC
CCGCCGCAAG GGGGGACCGC CTTCGCCATC CGTTACAGCG AGGGGAGCGC CGGGCCGGTG
CGGGTGGCCC CGGACGGCGA CGTCTGCCCT GACTGCCTCC ATGAGCTCTT CGATCCGGCC
GACCGCCGCC ATCGCTATCC CTTCATCACC TGCACCAACT GCGGCCCCCG CTACTCCCTC
ATCACCGCTG TCCCCTACGA TCGCCCCAAC ACCACCATGG CCCCCTTCCC CCTCTGCGAT
GCCTGCCGGA CCGAGTACGA GGACCCCCGG AACCGCCGTT TCCATGCCCA GCCGGTGGCC
TGTCCGGAGT GCGGTCCCCG GCTCAGGCTC GTGGATGCCG ACGACCGGGA CCTGCCAGGG
GATCCCGTGG AGGAGGCAGC AGGGCTCCTC TCCCAGGGAA AGATCGTTGC CGTGAAAGGG
ATCGGCGGCT ATCACCTGGC CGTGGACGCC CTGAACGACG GGGCGGTGCG GGAGCTGCGC
CGCCGCAAGG CCCGGGACGA GAAGCCCTTT GCGCTCATGG CCCCTGACCT GGCGGCGGTG
CGGACCTTTG CCCTTCCCGA CGCCGTGGAG GAGCGGCTCC TGGCCGCCCC CGAGCACCCC
ATCGTGCTCC TGCGCAAACG CCCCGACAAT CCCGTCTCCC CCCTGGCGGC CCCGGCCAAC
GGCTATTTCG GCACCATGCT CCCCTACGCG CCGCTCCACC ATCTCCTCCT GCGGGACCGG
TTTACGGCCC TGGTCATGAC GAGCGGCAAC CTCTCCGATG AGCCCATTGC CTACCGGGAC
GCCGAGGCCC GGGAGCGGCT TGCGTACATC GCCGACGCGT TCCTTGTCCA CGACCGGGAG
ATCCATACCC GAACCGACGA CTCGGTGATC CGGGTGTTCC GGGGTAATCC CCTCTTCCTG
CGCCGCTCCC GGGGATATGT GCCGCGGGAG GTGCGGATGC CCGTGGAGAT TCCGGCTGTC
CTTGCCGTGG GGGCCGAGCT CAAGGGGACC ATCTGCCTCG CCCGGGGAGA CCGGGCCGTC
ATGAGCCAGC ACATCGGCGA CCTGAAGAAT GCCGCCACCC TCGATTCTCT GGCGGAGACC
ACCGCGCACC TCCAGGGGCT CCTGGGGCTA ACCCCGGAGC TTGTTGCCCA CGACCTCCAC
CCCGACTACC TCTCCACGGC CTTTGCCGAG GGGATCCCGG TGCTTCCGCG GGTGGCGGTG
CAGCACCACC ACGCCCACCT GGCATCCTGC ATGGCCGAGA ACGGCCTCGA CGGGGAGGTG
ATCGGCGTCA TCTTCGACGG CACCGGCTAC GGCCGGGACG GCACGGTCTG GGGAGGGGAG
TTTCTCGTGG GGGGATACGG GGGCTTCCGG CGGGCCGGCC ACCTCCGGCA GGTTCCCCTT
CTCGGCGGCG ACGCGGCGGT GCGGGAGCCG TTTCGCATGG CCCTGTCCTA CCTTTACGAT
GCCTTCGGTG CCGACTTTTT CGGCCTTTCC CTGCCGTGGC TTCGGGAGAT CGGCGAAGCC
GAGCGGCCTC TTTTTCTCCA GATGCTGGAG CGCCGGATCA ACTCCCCCCC CACCTCCAGC
TGCGGTCGGC TCTTCGATGC CGTGGCGGCC CTCACGGGGG TGCGGGGAAG GGTCTCCTAC
GAGGGGCAGG CGGCCATGGA ACTGGAGGCT CTGGCCGAAG GGAGCGCTAC GGCATCCATT
TATCCCTATG CCATTGTTCG CAACGACGTC AGCGCCGAGG TCGATTTCCG GCTGATGGTC
CGGGCGCTCG CGGAGGATGC GGCCGCCGGC CGGCCGGGGG GGGAGATGGC CCGGGCTTTC
CACAATACCC TTGCCGCGGC AGTGACGGAC CTCTGTGCCC AGATTCGCGC TGTGGACGGC
CTGGACCGTG TCGTCCTCTC CGGGGGCGTT TTCCAGAACA AGCTCCTGAC GGAAGGGGTT
TTCCAGTCCC TGGCCGATCA GGGATTCCAT GTCTACACCC ACCGGCTCGT TCCTCCCAAC
GACGGGGGGC TGGCCCTGGG GCAGGCGATA ATCGCAGGAT ACGGAGCACG AAAAGGAGAA
TAG
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| Protein sequence | MTDARRTRIT IEGIVQGVGF RPFVFRLAEH HGIAGWVQNT TAGVVVEAEG DARRLASFVA
DLTGKAPPLA VIVSLATEEI PPQGGTAFAI RYSEGSAGPV RVAPDGDVCP DCLHELFDPA
DRRHRYPFIT CTNCGPRYSL ITAVPYDRPN TTMAPFPLCD ACRTEYEDPR NRRFHAQPVA
CPECGPRLRL VDADDRDLPG DPVEEAAGLL SQGKIVAVKG IGGYHLAVDA LNDGAVRELR
RRKARDEKPF ALMAPDLAAV RTFALPDAVE ERLLAAPEHP IVLLRKRPDN PVSPLAAPAN
GYFGTMLPYA PLHHLLLRDR FTALVMTSGN LSDEPIAYRD AEARERLAYI ADAFLVHDRE
IHTRTDDSVI RVFRGNPLFL RRSRGYVPRE VRMPVEIPAV LAVGAELKGT ICLARGDRAV
MSQHIGDLKN AATLDSLAET TAHLQGLLGL TPELVAHDLH PDYLSTAFAE GIPVLPRVAV
QHHHAHLASC MAENGLDGEV IGVIFDGTGY GRDGTVWGGE FLVGGYGGFR RAGHLRQVPL
LGGDAAVREP FRMALSYLYD AFGADFFGLS LPWLREIGEA ERPLFLQMLE RRINSPPTSS
CGRLFDAVAA LTGVRGRVSY EGQAAMELEA LAEGSATASI YPYAIVRNDV SAEVDFRLMV
RALAEDAAAG RPGGEMARAF HNTLAAAVTD LCAQIRAVDG LDRVVLSGGV FQNKLLTEGV
FQSLADQGFH VYTHRLVPPN DGGLALGQAI IAGYGARKGE
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