| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Clim_1785 |
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| Symbol | |
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| ID | 6354614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium limicola DSM 245 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010803 |
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| Strand | - |
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| Start bp | 1961924 |
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| End bp | 1964218 |
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| Gene Length | 2295 bp |
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| Protein Length | 764 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642669388 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_001943803 |
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| Protein GI | 189347274 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00144703 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCCTG ATGGTACCCG TCGTATCAGG ATTACGGTAA ACGGTATCGT GCAGGGGGTG
GGGTTTCGTC CTTTTGTTTA CCGTCTTGCC TGTACGCGAT CGATACAGGG GTTTATCAGG
AACACCCCTT CGGGAGTCGT GATCGAGGCT CAGGGACCGG GGGAGACGCT CGAAGGGTTT
CTCACGGAAA TTGAGCGCCA TCCGCCTCCG CTTGCAAGAA TCACGGCTCT GGAGACCGTT
TCCGTTTCCT GTGAGCCGTG CTCCTGTTTT GAGATCGATC TCTCTGTTCA TGGTCACGAG
GTTGAAACGT TGATCCCGCC GGATATAGCG CTTTGCGAAA GCTGCCGCAG TGAGCTTTTC
GACTCGCGGA ACAGGCGGTT CCGTTATCCG TTCATCAATT GCACTGATTG CGGACCGCGA
TACACGATCG TCGAGAGCAT TCCCTATGAT CGTCCGTTTA CCTCCATGAA GGGGTTTCCC
TTATGTCCGG ATTGCGCGGA GGAGTATCGG GATCCCCTTG ACCGGCGTTT TCACGCTCAG
CCCAATGCAT GCCCCGTATG CGGTCCGGCA GTTATGCTTC TGGACTCTTT CGGAAATCGC
CTTGCTGCCG ACAGGGTTAT ACGGGAGGCT TCTGCCATGC TCAAGGCGGG AAAGATTGTT
GCCGTGAAAG GTGTGGGGGG GTTTCATCTC GCTGTCGATG CCCGTAACGG GAGTGCAGTT
CAGCGCCTCA GGGATCAGAA GGCGAGGGAG GAGAAGCCTT TTGCCGTGAT GATGCGCGAT
CTTGCATCGG TGCGGCAGAT CTGCGTTGTC GGAAGCGATG AGGCGGCGGC ACTCCGTTCT
GCGGAAGCGC CCATAATGCT GCTTGAAAAG AGTGCCGGAT TCCCTCTGCC GGAGATAATC
GCTCCCGGAA ACGACCGTCT TGGCGTGATG CTTCCCTATT CGCCGCTTCA CGCCCTGCTG
CTCGAAGAGG GACCTGACAT GGTGGTGATG ACAAGCGCCA ATTGCAGCGA TGAACCGGTG
CTGCATGACG ATGCCGATGC GGTTCGGAGG CTTGTTGGCA TTGCGGATGC TTTTCTGGTG
CATAACCGTC CGATTCTGCA GAAGTGCGAT GATTCGGTTG CGATTCACCT TTCGGGAGCG
CTTCGCCTTT TCAGGCGCAG CAGGGGCTAT GTGCCCGCTC CGGTTTTGCT CGATGAGGAT
GGTCCGCCAC TGCTTGCGAC AGGAGGAGAG CTGAAAAATA CCCTTTGTCT CCTGCACGGC
CGAAACGCGA TTCTGAGTCA GCATCTCGGC GATATGAAGA ATTTCGAAAC GTGGCAGTTT
TTCACGGATG CGGCACGGCA TCTGCAGGAG CTGTTCCGTG CCAGTCCGGA GCTTGTCGTG
CATGATCTGC ACCCGGATTA TCTTACTACC CGATGGGCAT CAATGCAGCC TCTTCCGCTG
CTTGGCGTAC AGCATCATCA TGCCCATCTT GCCGCCTGTC TGGCCGAGAA CGGGGAGCAC
TCTCCGGTTA TCGGCCTTGT GCTTGACGGT ACGGGATATG GCCCGGACGG CACCATATGG
GGCGGCGAAG TGCTGATTGG CGATTGTGCC GGAGTCGAGC GCTTTGCTTC GCTGGAAGCG
ATGCCGCTTC CAGGTGGAGA TGCCGCGATT CTCGAGCCGT GGCGAGCAGC TCTGGGTTAT
CTTTACAGAA GTTGTCCTGA AATTCCGTAC CTCCCTTTTC TTCGCGATTT CATGAGCAAC
GAGGTGACGG AACTGCTTGT GCGAAACCTT CATTGTCCGG AAACTTCAAG TTGCGGACGG
TTGTTCGATG TCGTGGCCGC AGTCGCAGGA CTTCGGAACA GGGTTTTTTA CGAGGGCCAG
TCGGCGGTCG AGCTTATGCA GGCGGCCGGC GGCCGGTTGG GTTCCGGTCG TTTCAGCAGC
GGCGTGGAGG TGCGCGATGG ACGGCTGGTG ATGCTTGTCG CTCCGTTGGT GCGCGACGTC
GCTTCTGCCG TTGGAGACGG GATGCTGCCA GGGGAGATCA GCAGGCGTTT CCATCGTACG
CTGTGCGATA TGCTGCTCGA CGTAACCCGA AGGGCATCAT CCGCTTCGGG GATATGTACG
GTTGCGCTCA GCGGTGGCGT GTTCCAGAAT TCGCTGCTTT TTGAAACGCT TGTCGCCGAA
TTGCAGGCTT CGGGGTACAT GGTGCTGACC CATACGGCGG TGCCGTGCAA TGACGGCGGC
ATTTCTCTTG GCCAGGCGGT TATCGGCAGG GAATATCTGA AAGGGAAGTA TGGGGGGGTA
GTGGGAAATG GGTAG
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| Protein sequence | MYPDGTRRIR ITVNGIVQGV GFRPFVYRLA CTRSIQGFIR NTPSGVVIEA QGPGETLEGF
LTEIERHPPP LARITALETV SVSCEPCSCF EIDLSVHGHE VETLIPPDIA LCESCRSELF
DSRNRRFRYP FINCTDCGPR YTIVESIPYD RPFTSMKGFP LCPDCAEEYR DPLDRRFHAQ
PNACPVCGPA VMLLDSFGNR LAADRVIREA SAMLKAGKIV AVKGVGGFHL AVDARNGSAV
QRLRDQKARE EKPFAVMMRD LASVRQICVV GSDEAAALRS AEAPIMLLEK SAGFPLPEII
APGNDRLGVM LPYSPLHALL LEEGPDMVVM TSANCSDEPV LHDDADAVRR LVGIADAFLV
HNRPILQKCD DSVAIHLSGA LRLFRRSRGY VPAPVLLDED GPPLLATGGE LKNTLCLLHG
RNAILSQHLG DMKNFETWQF FTDAARHLQE LFRASPELVV HDLHPDYLTT RWASMQPLPL
LGVQHHHAHL AACLAENGEH SPVIGLVLDG TGYGPDGTIW GGEVLIGDCA GVERFASLEA
MPLPGGDAAI LEPWRAALGY LYRSCPEIPY LPFLRDFMSN EVTELLVRNL HCPETSSCGR
LFDVVAAVAG LRNRVFYEGQ SAVELMQAAG GRLGSGRFSS GVEVRDGRLV MLVAPLVRDV
ASAVGDGMLP GEISRRFHRT LCDMLLDVTR RASSASGICT VALSGGVFQN SLLFETLVAE
LQASGYMVLT HTAVPCNDGG ISLGQAVIGR EYLKGKYGGV VGNG
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