| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Synpcc7942_2551 |
|---|
| Symbol | |
|---|
| ID | 3775144 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus elongatus PCC 7942 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007604 |
|---|
| Strand | - |
|---|
| Start bp | 2629750 |
|---|
| End bp | 2632062 |
|---|
| Gene Length | 2313 bp |
|---|
| Protein Length | 770 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637801001 |
|---|
| Product | (NiFe) hydrogenase maturation protein HypF |
|---|
| Protein accession | YP_401568 |
|---|
| Protein GI | 81301360 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0068] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.102731 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGGAG TCCTCACGGC AAAACAGGAG CGCTGGCGGC TGCGCGTCCA AGGCGTGGTG
CAGGGCATCG GCTTCCGACC TTTTGTCTGG CGTTTGGCTC GCGAACTGGG ACTGACCGGC
TGGGTGAACA ATGATGCGGC TGGCGCTCAG ATTGAAGTGG AAGGAGCGAT CGCCCAACTC
CAGCAGTTTC AGCAGCGCTT GCTGGTTGAA CTCCCTGCGG CAGGTCGCTG TGATCGCCTG
CAACAAGAAC GGCTGACTCT TCAAGGCGAT CGCGAGTTTG TGATTGCAAC TTCAATGGCT
TCGGAGCAGA GCACCGCGCA ACTACCGCCC GATCGCGCTC CTTGCTCTGC CTGTCTGCGA
GAACTGTGGG ATCTGCGCGA TCGCCGCTAT CGCTATCCCT TTCTGAATTG CACCGTCTGC
GGCCCGCGCG CCAGCATTGT TCGGCAACTT CCCTACGATC GCAATCGCAC CACGCTGGCG
ACGTTTCCGC TCTGCCCCGA CTGTCAGCGG GAGTATCAAG ATCCGAGCGA TCGCCGGTTT
CATGCCCAGC CGATCGCCTG CCCCACCTGT GGCCCACAAC TGCAACTTTG GGATGCTCAA
GGTCAAGTTT TAGCCGATCG CGATCGCTCT TTGACTGAGG CGATCGCCGC ACTTCAACAA
GGCAAAATTC TGGCATTGAA AGGACTGGGC GGCTTTCAAC TGCTGGTAGA TGCCTGCCAG
ACTGACGCGG TGCAACGACT GCGCGATCGC AAAAGCCGAC CTCATAAACC GCTAGCGTTA
CTCCTGCCGG ATCTGGAGGC GGTGCGACAG CTTTGCCAAA TCTCTGCCGC TGAAGCAGAA
CTCTTGCAGT CGCCTGCTGC ACCGATCGTG TTGCTGCGGG CGATCGCTTC GGAACCTTGG
CTGGCGGCGA TCGCACCAGA CTGCTGTGAA CTCGGCCTGA TGCTACCGGC GACACCGCTC
CATCATTTGC TCAGTCGTGA TTTTGGTCAG CCGTTGGTCG CCACCAGTGG CAACCGTAGC
GGCGATCCGC TCTGCTGGGA TGAAGTAGAT GCGCTGGAGA GCTTGAGTGC AATCGCCGAT
CTTTGGCTCG TCCACGATCG TCCGATCGCC CTACCAATGG ATGATTCCGT CACGCGGATT
ATTGATGGAC AGATTCAAGT TCTGCGCCGA GCAAGGGGCT ACGTTCCGAC GCCGATCGCG
ATCGCAACGC CCGCTGAACC CCTCCTCATT CTGGGTAGTT GGCAGAAGAA CACGCCCGCG
ATCGCGGCTG ATGGACAACT GCAACTCGCG CCCTATGTTG GTGACCTCGA AAGTCTTGCC
GCCCGCGATC GCCGCCAACA AGTAATTGAG CATCTACAAA CTGTGATGGG ATTGCAGCCA
ACCGCTTGGG TTGCCGATGC TCATCCGGAT GCGCCTTTGC TGGCGCCAAC CGAAACGCGA
TCGGGCTGGC ATGTTCAGCA TCACTTGGCG CATGTGTTGG CCGTAGCAGC CGAACATCAA
CTGCAACCAC CTTTTCTCGG GCTGGCTTGG GATGGCAGTG GCTGGGGACT CGATCAAACC
GTTTGGGGCA GTGAAGCCTT GATTTGCCAG ACGGAGGGCT GGCAACGCTG GAGGCATCTC
CAGCTGTGGC CACTGTTGGG GGGCGATCGC GCTGCAAAAG AACCGCGCCG GTCTGCTCTG
GCCCTGCTCT GGCAGCTCGA AGGCGATCGC TGCTGGGATT TGCCGGAGTT ACAAACGGTG
TTCAGCCCGA CGGAGCGATC GCTGTTACAG GCGTGGTTAA GTCGCGATCG CGGCCTGAAA
ACCTCCAGCA TGGGGCGATT ATTTGAGGCG ATCGCTTGGA TCTGTCGTTG GCAGGGTGAT
CAAACCTACG AAGGGCAGGT GGCGACTTGG CTAGAAAATC AGTGCGATCC TCAGATTGTC
GGCGATTATC CGCTGTCCCT GACTGAAACA GGTATTGACT GGCGATCGCT TCTGCAAGCG
GTTTGGTGCG ATCGCCAAGC AGATCTATCC ACGGCGATCC TCGCAACTCG TTTTCATCGC
AGCCTGATTC AGTTGGTTGT GGCACTTGCC CAGCAAGCAG GGCTAGAGCC AGTGATTTTG
AGTGGTGGTT GCTTCCAGAA TCGTTTCTTA TTGGAAGGCG CGATCGCGGC TTTGCGATCG
GCGGGCTTCC AGCCCTATTG GGCACAGCAA CTACCGCCCA ATGATGGTGG CATTGCAGCT
GGACAGGTCT TAGCCGTTCA TTGGTATGGA GGATCCAAGC ATGTGCTTAG CGGTTCCGGG
ACAACTGCTC AGTATTCACA CGCAGCCGGA TGA
|
|---|
| Protein sequence | MTGVLTAKQE RWRLRVQGVV QGIGFRPFVW RLARELGLTG WVNNDAAGAQ IEVEGAIAQL
QQFQQRLLVE LPAAGRCDRL QQERLTLQGD REFVIATSMA SEQSTAQLPP DRAPCSACLR
ELWDLRDRRY RYPFLNCTVC GPRASIVRQL PYDRNRTTLA TFPLCPDCQR EYQDPSDRRF
HAQPIACPTC GPQLQLWDAQ GQVLADRDRS LTEAIAALQQ GKILALKGLG GFQLLVDACQ
TDAVQRLRDR KSRPHKPLAL LLPDLEAVRQ LCQISAAEAE LLQSPAAPIV LLRAIASEPW
LAAIAPDCCE LGLMLPATPL HHLLSRDFGQ PLVATSGNRS GDPLCWDEVD ALESLSAIAD
LWLVHDRPIA LPMDDSVTRI IDGQIQVLRR ARGYVPTPIA IATPAEPLLI LGSWQKNTPA
IAADGQLQLA PYVGDLESLA ARDRRQQVIE HLQTVMGLQP TAWVADAHPD APLLAPTETR
SGWHVQHHLA HVLAVAAEHQ LQPPFLGLAW DGSGWGLDQT VWGSEALICQ TEGWQRWRHL
QLWPLLGGDR AAKEPRRSAL ALLWQLEGDR CWDLPELQTV FSPTERSLLQ AWLSRDRGLK
TSSMGRLFEA IAWICRWQGD QTYEGQVATW LENQCDPQIV GDYPLSLTET GIDWRSLLQA
VWCDRQADLS TAILATRFHR SLIQLVVALA QQAGLEPVIL SGGCFQNRFL LEGAIAALRS
AGFQPYWAQQ LPPNDGGIAA GQVLAVHWYG GSKHVLSGSG TTAQYSHAAG
|
|---|
| |