| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1674 |
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| Symbol | |
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| ID | 4603925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2046154 |
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| End bp | 2048469 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639781037 |
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| Product | hydrogenase maturation protein HypF |
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| Protein accession | YP_927550 |
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| Protein GI | 119774810 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGTAA AGATAAGCCT TCACATCACC GGCATAGTTC AGGGGGTTGG GTTTCGGCCC
CATGTATTTC GCCTCGCCCA CGAGCTCGGG CTTGGCGGCA GTATCCGTAA CGATGCTGAA
GGCGTCTTTA TTCGTTTGAT GGGTGCCCAG CATAAAGTCG ATGACTTCAT TGAAAAGCTG
CGCAGTGCCC CGCCGCCACT GGCGCGGATA GACGGTTTCA CCCTGATAGC CGATGACGGT
TCTGATCTTG ACGAAACGCG CTTCGTGATT GAAGAAAGCC AGGCCGGCGG CGAGGCTCAG
GTTGTGGTAT CACCGGATAA AAGCATGTGT CCGGACTGCC TGGCTGATAT CCGCAACCCA
AGCGACAGGC ACTACCGCTA CCCCTTTACC AACTGCACCA ACTGCGGCCC CCGCTACACC
CTGATAAAAG CCTTGCCCTA CGACAGAAAA CACACCTCGA TGGCGCACTT TGCCATGTGC
GCTCAGTGTG AAGCCGAGTA TAAAAATCCG CTGGACCGAC GCTATCACGC CCAGCCGGTG
AGTTGTCCAA ACTGCGGGCC CAAGCTCAGT CTCACCGGTC CGGACGGCAG CCTTATCAGC
AGCGATGCAG AGTTCTGTCT GGATGAGTGT GCGCGACTGT TAAAACAGGG CGCCATATTC
GCTATCAAAG GGCTTGGCGG CTTTCATCTG GTGTGTGATG CCACCCATGA GGAGGCCGTA
AGCAGCCTGC GAACGCGTAA AGTTCGCCCG GCTAAGCCCC TCGCAGTCAT GGTCAAAGAT
ATTGCCATGG CCAGAAGCTT CGCCGATGGC GCACAGGAGG AATGGCAACT GCTCTCTTCC
CGGGAGCGCC CCATCGTCAT TATGAAAAAA GCGGCTGAGC AGCATCGCGC AGTGCCAAAA
GATACCCAGC ACCGCGAACT TGCCGCCTCG GTGGCACCCG GCATCGACCG GATTGGACTT
TTTTTACCCT ACACACCACT GCATGCCTTG CTGCTGGACA GTGTTGACCG CCCGCTGGTC
GCCACCAGCG CCAACCGCAG TGGTGAGCCA ATCATCATAG CGGCTGTAGA TATCCACCAA
AAACTCGCAG GCGTGGTGGA CTTTATTCTC GACCACGATC GCCCCATCGT ATCGGGGTGT
GATGACAGCG TGGTCCAATG GTGTGCCGGA CAGCTCCAGG TTATCCGTCT CGCCAGAGGC
TATGCGCCGC TGGCAATGCT CAGCCCTAAA CCCAGCAAGT CCCATCTGAT GGCGGTGGGG
CCTCAGCAAA AAAATACCCT GGGATTTGGC CTTGGCCATA ACCTCTTCTT AAGCCCCCAT
ATCGGCGATC TCTTCAGTAT TGAGGCCGAA GATTATTTTA TTCGAACACT GGAGAGTTTT
AAGCGCCTCT ATCAGGTAGA GCCTGGCTGC GTGGTAGCCG ACCATCACCC GGATTATGCC
CCGAGCCGCT TTGCCCGGCG CTATGCCCAA AGTGGCGATC GCGCCATTGA ACTGCTCACT
GTGCAGCACC ATTTTGCCCA CATATTGTCG GTGATGGCGG CCAATTCCCG CAGCGAACCC
GTTCTGGGAT TCAGTTTTGA TGGCACGGGT CTCGGTGACG ATATGAGCCT GTGGGGCGGC
GAAGTGCTGC TGTGCAGCGC AACCCACTTC GAGCGTCTCG GAGGACTGAT GCCCTTTGCC
CTGCCCGGCG GGGACAAGGC CAGCAGCGAA CCCTGGCGGG TGCTGTTAAG CCTGCTCGCG
GGTCATCTTT CGGCCTCACA GCTTCAGGGA CTTCCCTGTT TTGCCCATTT AAGTCAGCCC
ATGCTGAACA ACCACCTCAA AGTCATAGGG CGTCCCGGCA CCTTGCAAAG CTCATCCATG
GGAAGGCTCT TTGATGCGGC CGCCGCCTTG CTGGGTATCT GCCAACGAGT CGAGTTTGAA
GGCCAGGCAG GCATGTTACT GGAAGCCTTT GCCGCCCGGG CAACCGGCCC CATCCCCACT
CTGGTTCTGG AAGATAAACA GGGCCAGTGG GACGGTGCAG CGCTGCTGGT GTCTATGCTG
GAGCAGATGG ACACGTTGGA TACCTCCCCA GAATGCCTGG CGAACGCTTT TATCAATGCC
ATCGCCGATG CCATCGCCGA GAAAGCGCGT CATTATCCCA ATTTGCCCGT GGCACTGAGC
GGCGGCGTGT TCCAAAGCCG CACTCTCGCC AATGCCACTG CCCAGAGGCT TTCACAACAA
GGGCTTAAGC TGCTGCCATG GGGGCAGGTC CCGGTAAATG ATGGTGGTAT CGCCCTCGGC
CAACTTTGGT ACGCAGTTCA CAGTTTTGGT CAATAA
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| Protein sequence | MSVKISLHIT GIVQGVGFRP HVFRLAHELG LGGSIRNDAE GVFIRLMGAQ HKVDDFIEKL
RSAPPPLARI DGFTLIADDG SDLDETRFVI EESQAGGEAQ VVVSPDKSMC PDCLADIRNP
SDRHYRYPFT NCTNCGPRYT LIKALPYDRK HTSMAHFAMC AQCEAEYKNP LDRRYHAQPV
SCPNCGPKLS LTGPDGSLIS SDAEFCLDEC ARLLKQGAIF AIKGLGGFHL VCDATHEEAV
SSLRTRKVRP AKPLAVMVKD IAMARSFADG AQEEWQLLSS RERPIVIMKK AAEQHRAVPK
DTQHRELAAS VAPGIDRIGL FLPYTPLHAL LLDSVDRPLV ATSANRSGEP IIIAAVDIHQ
KLAGVVDFIL DHDRPIVSGC DDSVVQWCAG QLQVIRLARG YAPLAMLSPK PSKSHLMAVG
PQQKNTLGFG LGHNLFLSPH IGDLFSIEAE DYFIRTLESF KRLYQVEPGC VVADHHPDYA
PSRFARRYAQ SGDRAIELLT VQHHFAHILS VMAANSRSEP VLGFSFDGTG LGDDMSLWGG
EVLLCSATHF ERLGGLMPFA LPGGDKASSE PWRVLLSLLA GHLSASQLQG LPCFAHLSQP
MLNNHLKVIG RPGTLQSSSM GRLFDAAAAL LGICQRVEFE GQAGMLLEAF AARATGPIPT
LVLEDKQGQW DGAALLVSML EQMDTLDTSP ECLANAFINA IADAIAEKAR HYPNLPVALS
GGVFQSRTLA NATAQRLSQQ GLKLLPWGQV PVNDGGIALG QLWYAVHSFG Q
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