| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1910 |
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| Symbol | |
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| ID | 5371096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2275270 |
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| End bp | 2277786 |
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| Gene Length | 2517 bp |
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| Protein Length | 838 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640830113 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_001366116 |
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| Protein GI | 153000435 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.402426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAGGA GGCCAAAAGT TAAGTCACAA CGCATGCAGC CACATAGACA TAATAGTCGC
CACAAAAAGC ACAGTGATCT GCAGATAAAG CGCAGGCTGG CATTGGAATA CCTTGTCCAC
AAGGGCGCCG CGCTAAAGCG TTGTCAGCTG CAGATCACTG GCATAGTGCA AGGGGTGGGA
TTTCGCCCCT TTGTCTATCG TTATGCCCTT GAACTTCAAC TAACAGGTAC TGTGCTCAAC
AGTGCCAAGG GCGTGACCAT TGAGCTGCAA GGCACGAAAG AAAACCTCAC GCAATTTATC
ACAACGCTCA ATACCACCCC GCCGCCACTG GCCCGTATCG ACAATATCAC CCAAACATCG
CTGCCGATTT TGCTAGGCGA AACCACATTT GAAATTATAA AAAGCGACAG CCATGAGGAC
GATGACCCAA GTTCACCGAT AGGCGCGCAG GTGGCAGTAT CGGCGGATAA AAGTACCTGC
CAAGATTGCT TGAACGACAT GCATAATCCT GATGATCGCC ACTTTGGCTA TGCTTTTACC
AACTGCACAA ATTGCGGCCC AAGATACACC ATAATCAATG CCTTACCTTA TGATCGCCAC
AGTACCGCCA TGGCCGATTT TGACATGTGC CCCGAGTGCG CCAAAGCATA TCAAAACCCA
CTCGATCGCC GCTATCATGC CCAGCCTGTC AGTTGCCCAG TTTGTGGCCC CAGACTCAGT
TTAAAAACAC CCCAAGGGGA ATACATCATT CCCAATACCT CTAATTTCAG CACACCTGAA
TTGAGTACGG ATTTGGCGGT ACTGAAAGCG GCGGCTAACA GATTACACCA AGGGCAGATT
CTGGCAATTA AAGGACTGGG CGGATTTCAC TTAATCTGTG ATGCCCGTAA CGACAAAGCA
GTCAACACTC TCCGGCTGCG AAAACAGCGC CAAGCCAAGC CGCTAGCGGT GATGATGGCG
GATATCCAGA TGGCGCAGCA CTATGTCACA GGTACGGATG CCGAGTGGCT AGTACTGAGT
TCGCAGGAAA GACCCATAGT GCTGATGAGC AGCCGCGCCG AACATGATCT AAGCCCAGCG
GTCGCCCCCA ATCTGAATAA ACTCGGGGTA TTTTTGCCCT ACACTCCACT GCATCATTTG
CTGTTAGATC TCTTCAAAGG GCCATTGGTC GCGACCAGCG CTAATGTGTC CGGAGAACCT
ATCATCACAA ATTGTGATGA GCTTATTCAC CACTTAAGCC ATGTGGTGGA TGCGATAGTC
GATCATAATC GGCCGATTAT TAATGGCTGC GATGACAGTG TGGTGCAGGT GATTCAGCCC
AACATGGATT CGCCTGCAGA GGTGCAAGTG CTTCGCCTCG CCCGTGGTTA TGCGCCGTTA
AGTTTCCCAC TTGATACACC GCTAACCCAA TCAATTTTGG CCGTGGGCGC ACAGCAAAAA
AATGCTATCG CCCTAGGCTT TGGCAACAAT GTGTTTTTAA GTCCCCATAT TGGCGATTTA
TTTAGTGTCA GCGCCGAGCA GTATTTTGAG CGCACCTTAG CCACTTTTGC TCGGTTGTAT
CACTTTGCGC CCAATCTCGT TGTTCGCGAT AAACACCCAG ATTATGCCCC ATCGCGCTGG
GCTGAAATGC ACTCAAACTC GAGTGTAGAA CTGCGCGATG CCAGTCAAAA CCAATGTATA
GCGGTGCAAC ATCACCATGC CCATGTGCTC AGCGTAATGG CGGTTAACCA ATATCGAGAT
CCCGTATTGG GCTTTAGTTT TGATGGCACT GGGCTTGGCG ACGATGGCAG TTTATGGGGC
GGTGAAGTGC TATTAACCAC GCTGGATAAA GCGCAGCGAC TGGCCCATTT TGAGCCCATA
GCGCTACTGG GCGGCGAACA AGCAATTAAG CAACCCGTGA GGTTGTTACT GGCATTATTG
TTCGAGCAAA TGAGCCTCGA TGCTGTACTC GCATTGCAAT TACCTATATT AAACAACATG
CGCCCAAACA CTCTGACTAA CTTACATAAG ATCTGGCAGA ACGGCAGCGC GATAAAAACC
TCCTCTGTCG GGCGACTGTT CGATGCCCTC GCCTGCGCCT TAGGCTTAAT CGAAACCACA
CAATTTGAAG GTCAAGCGGG CATGGCAATA GAAGCCGCGG CCAATCGCGC CGATGCATTA
GCCCTTGAAG CCATGTCGCT TAACTTACCT CTTGACGTCG ACCAGTGGCG CAGCAGTGAA
ATGTTCAAGC AAATTGTTGA ATTGATTACT GAAAAACCGC TAACAGACAA CAGACGAGAT
GCCATTGCCT GCGCCTTTTT ACACACATTA TGCGATGCTA TCTGCGACTA TGCTGCCCAG
TACAAACATC TTCCAACCGT GTTCTGCGGC GGCGTATTCC AAAATAAATA CCTATTGGAA
TATTGCCTGA GCAAACTCAG CGCCCAAGGA AATAAAGTGT TATCCAGTCA ACAGATCCCC
ATCAATGATG GCGGCATCGC CCTAGGCCAA CTCTGGTATG GGATGCATAG AAACTAA
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| Protein sequence | MIRRPKVKSQ RMQPHRHNSR HKKHSDLQIK RRLALEYLVH KGAALKRCQL QITGIVQGVG
FRPFVYRYAL ELQLTGTVLN SAKGVTIELQ GTKENLTQFI TTLNTTPPPL ARIDNITQTS
LPILLGETTF EIIKSDSHED DDPSSPIGAQ VAVSADKSTC QDCLNDMHNP DDRHFGYAFT
NCTNCGPRYT IINALPYDRH STAMADFDMC PECAKAYQNP LDRRYHAQPV SCPVCGPRLS
LKTPQGEYII PNTSNFSTPE LSTDLAVLKA AANRLHQGQI LAIKGLGGFH LICDARNDKA
VNTLRLRKQR QAKPLAVMMA DIQMAQHYVT GTDAEWLVLS SQERPIVLMS SRAEHDLSPA
VAPNLNKLGV FLPYTPLHHL LLDLFKGPLV ATSANVSGEP IITNCDELIH HLSHVVDAIV
DHNRPIINGC DDSVVQVIQP NMDSPAEVQV LRLARGYAPL SFPLDTPLTQ SILAVGAQQK
NAIALGFGNN VFLSPHIGDL FSVSAEQYFE RTLATFARLY HFAPNLVVRD KHPDYAPSRW
AEMHSNSSVE LRDASQNQCI AVQHHHAHVL SVMAVNQYRD PVLGFSFDGT GLGDDGSLWG
GEVLLTTLDK AQRLAHFEPI ALLGGEQAIK QPVRLLLALL FEQMSLDAVL ALQLPILNNM
RPNTLTNLHK IWQNGSAIKT SSVGRLFDAL ACALGLIETT QFEGQAGMAI EAAANRADAL
ALEAMSLNLP LDVDQWRSSE MFKQIVELIT EKPLTDNRRD AIACAFLHTL CDAICDYAAQ
YKHLPTVFCG GVFQNKYLLE YCLSKLSAQG NKVLSSQQIP INDGGIALGQ LWYGMHRN
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