| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3207 |
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| Symbol | |
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| ID | 4074345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008036 |
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| Strand | + |
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| Start bp | 16863 |
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| End bp | 19244 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638004408 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_611139 |
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| Protein GI | 98152890 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAATCTG GCGCGGTGAC CGGCGAACGC CTTTTGGTAC GCGGCCAGGT GCAGGGCGTA
GGCTTCCGGC CCACTGTATG GCGGGTTGCA CGCGAGCTTG AGCTAACCGG TGATGTGCGC
AACACCAGCA GCGGGGTTGA AATTCGCCTT TGGGGCGAAG CGGTGTCGCG CTTTGAAAGC
GAACTGCGCG CGGCGCTGCC TGCATTGGCG CGGATTGATG CGATAGAACG CGTGGCAATT
GATGCTGTGC GGCCCGAGAG CTTCGTTATC GGTGCATCGG AAGGTGACGG CATGCGCGGG
GCTGTAACGC CCGATGCGGC AATCTGCTCC GCCTGCCTTG AAGAAGTGCG CGATCCTTTC
GAGCGTCGCT ATCGCTACCC CTTTACCAAT TGTACCGAAT GCGGGCCGCG TTTCTCGATT
ATCGAGACCG GCCCCTATGA TCGTGCCCGC ACGACCATGA GAGGTTTCGC GATGTGCCCG
GAATGCGGAG AGCAATATTC CGATCCGACA GACCGGCGCT TCCATGCCCA ACCTATCGCG
TGCCATGTTT GCGGACCGCG CGCATGGATC GAGCGCCTTG GCCCCGGTAC TGTTAATCAC
GAAGCCTTTT CGATGATGGA CGACGTGGAT GCCGCAGGCG GCATGCTGAT GAACGGGCAT
ATCGTCGCCA TCAAGGGGCT TGGCGGCTTT CATCTCGCCT GTGATGCCAC CCGCGCGGAG
GTGGTGGCCG ATCTGCGTAT GCGAAAACGG CGCAGGGGCA AGGCCTTTGC CCTGATGGCG
CGCGATCTGG ACGTTATCCG CCGTTATGCC GAATTCTCGG ATCAGGAAGC CGAACTGCTG
GCATCGCCTG AAGCGCCGAT CGTGTTGCTG CGCGCATCGG GGGAGCCGCT GGCTGAAGCG
GTGGCGCCGG GGCTGGACCG GATCGGCTTC ATGCTGCCTC ACACCCCGCT GCATCACCTG
CTGTTGCGGC GGATGAAGCG CCCGGTGGTG ATGACTTCGG GCAATCTCTC AGGCCGCCCG
CAATGTACCT CTAACGAGCA GGCCCGTGCC GAACTGGAAG GCATTGCCGA ATTTGCGCTG
ATGCACGACC GGCACATTGC CAACCGGATC GACGACAGCG TTACGCGGGT CGATCTGGGC
CGGGTCCGGC TGCTGCGCCG CGCGCGCGGC TACGCCCCCA GAGCTATCGA CTTGCCCACC
GGCTTTCCGC GCGACCTCTC GCTGCTGGCC ATGGGTGCGG AGCTCAAGAA CAGCTTCTGT
CTGGTGCGCG ATGGCGAAGC TGTGCTGAGC CAGCACATGG GCGATCTGGA GGATGCGGCC
ACCGAAGATG ATGTGCGCCG CAACCTCGAT CTTTATACCC AGCTCTACGA CCATCAGCCA
GCGGCAATCG CGGTGGACGC GCATCCCGAA TATCTTTCGA CCAAGCATGG GCGCGAAATC
GCGGATGGAC GACCGGTGAT CGCGGTACAG CATCACCACG CCCATATCGC CGCCTGTCTG
GCCGAAAACG GCCGCTCGCT CGATGCCGCC CCTGCACTGG GAATTGCGCT TGACGGTCTG
GGCCTGGGTG ATGACGGCAC GATCTGGGGC GGTGAGTTCC TGATCTGCGA TTATCGCGGA
TACCGTCGTG CCGGGATGCT CAAGCCGGTC GCACTACCGG GTGGGACTGC GGCGATCCGC
GAACCCTGGC GCAATGCCTA TGCCCATTTG ATGGCGCAGA TGGGCTGGGC CGAATTCGCG
ATGAATTTCG CTGACCTGCC ATTGTTTGCC CGCCTTTCCG CCATGCCGCG ATCCACGATC
GATGCGATGA TCGCCAGCGG CACCAATAGC CCACTTTCTT CCTCATGCGG GCGGTTGTTC
GATGCCGCAG CGGCGATCTG CGGTCTCGCC TGGGATCGGC AGGAATATGA AGGACAGGCA
GCCATGTTGC TGGAAGCAGC AATCGATCCG GCGGCGCTGA ATGAGCCGGA CGATCTGGCC
TATCCTTTTT CCATTCCGTT GCTGGGCGGG CGTGGGCTTC CCTATGTTGA ACCGCTCGCC
GTGTGGCGGG CGATGCTGGG TGACCTGCTG CTGAATACGC CGGTTGGGGT GATGTGCGCG
CGGTTCCATC GCGGCCTCGC ACGGTCTGTT GTGGCCATGG CGCAGCGCCT GACCGCAGAC
GATGGCCCTG ATACTGTGGC CCTGTCTGGC GGCTGTTTCC AGAACGCCAC GCTGTTCCGC
CTGGTCCATG AAGGATTGGA ACAGCTGGGG CTCAACGTCC TCAGCCACTC GAGAGTGCCC
GCCAATGATG GCGGTCTGGC TTTGGGGCAG GCCGCTGTGG CCATGGCCCA TTTGCACGAA
GCGACCGCGG AAACCGAAAA TGGGAGAGAA GTATGTGCTT AG
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| Protein sequence | MESGAVTGER LLVRGQVQGV GFRPTVWRVA RELELTGDVR NTSSGVEIRL WGEAVSRFES
ELRAALPALA RIDAIERVAI DAVRPESFVI GASEGDGMRG AVTPDAAICS ACLEEVRDPF
ERRYRYPFTN CTECGPRFSI IETGPYDRAR TTMRGFAMCP ECGEQYSDPT DRRFHAQPIA
CHVCGPRAWI ERLGPGTVNH EAFSMMDDVD AAGGMLMNGH IVAIKGLGGF HLACDATRAE
VVADLRMRKR RRGKAFALMA RDLDVIRRYA EFSDQEAELL ASPEAPIVLL RASGEPLAEA
VAPGLDRIGF MLPHTPLHHL LLRRMKRPVV MTSGNLSGRP QCTSNEQARA ELEGIAEFAL
MHDRHIANRI DDSVTRVDLG RVRLLRRARG YAPRAIDLPT GFPRDLSLLA MGAELKNSFC
LVRDGEAVLS QHMGDLEDAA TEDDVRRNLD LYTQLYDHQP AAIAVDAHPE YLSTKHGREI
ADGRPVIAVQ HHHAHIAACL AENGRSLDAA PALGIALDGL GLGDDGTIWG GEFLICDYRG
YRRAGMLKPV ALPGGTAAIR EPWRNAYAHL MAQMGWAEFA MNFADLPLFA RLSAMPRSTI
DAMIASGTNS PLSSSCGRLF DAAAAICGLA WDRQEYEGQA AMLLEAAIDP AALNEPDDLA
YPFSIPLLGG RGLPYVEPLA VWRAMLGDLL LNTPVGVMCA RFHRGLARSV VAMAQRLTAD
DGPDTVALSG GCFQNATLFR LVHEGLEQLG LNVLSHSRVP ANDGGLALGQ AAVAMAHLHE
ATAETENGRE VCA
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