| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mvan_2407 |
|---|
| Symbol | |
|---|
| ID | 4644829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium vanbaalenii PYR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008726 |
|---|
| Strand | - |
|---|
| Start bp | 2561046 |
|---|
| End bp | 2563316 |
|---|
| Gene Length | 2271 bp |
|---|
| Protein Length | 756 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 639805891 |
|---|
| Product | (NiFe) hydrogenase maturation protein HypF |
|---|
| Protein accession | YP_953227 |
|---|
| Protein GI | 120403398 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0068] Hydrogenase maturation factor |
|---|
| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.258708 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGCC GTCGGCGGGT TCGCATCGAC GTACGCGGCG TCGTGCAGGG GGTGGGGTTC
CGGCCGTTCG TCTACACCCG GGCCACGGCG CTGGGGCTGT CCGGTTCGGT GCGTAACGAC
AGCACCGGGG CCATCGTCGA AATCGAGGGC GCCGCCGACG ACATCGACCG CTTCCTCGCC
CGACTCCACG ACCATCCGCC GCCGCTTGCC GTCGTGGAAT CCGTCGACGT CCGGTCCGTT
CCGCTTTCCG GGGGCACCGG CTTCGCGATC GCCGACACCT CCCGCACCGA CGGCGGCCGC
ACGCTCGCCT CCCCGGACGT CGCCATGTGC GCCGACTGCG CCGCCGAGCT GCGCGACCCA
CGCAACCGGC GCTTCCGGCA CCCGTTCATC AACTGCACCA ACTGCGGTCC GCGGTTCACC
ATCATCGCCG CGCTGCCGTA TGACCGGTCG TCGACCACGA TGGCGGATTT CCCGATGTGC
GCCGACTGCG CCGGCGAATA CACCGACCCC ACCGACCGCA GATTCCACGC CCAGCCCATC
TGCTGCCCGG GTTGCGGACC GACGCTGCGC TACCGCGACG GCGACGGCCG TGACACCGAC
GGCGAACCCG GCCTACTTGC CGCCAGGCGG CTGCTGCGTG ACGGCGGCGT GCTGGCGGTC
AAGGGCGTCG GCGGCTACCA CCTCGCCTGC GACGCGTCCG ACCGCCGTGC GGTGGCCGCG
CTGCGCGCGC GGAAACGTCG CGGCGACAAG CCGTTCGCGG TGATGGTGCC CGACATCGAC
GCGGCGCGGG CGATCGCCGA CGTCGACCCC GCGTCTGCGG CGCTGTTGCG CGGTCCCGCC
CGCCCGATCG TGCTGATGCA GCGGCGTGCC GGCGCGGCGG TCGACGCCGC GGTGGCACCG
CACAACCCCG ACCTCGGTGT GCTGCTGACC TACACACCGC TGCATGCGCT GCTGCTCGGG
CTCGACGGCG ACGGGCCAGG CCCACAGGTG CTGGTGATGA CCTCGGGCAA TCTGGGTGGG
GAACCCATCT GTTTCACCGA AGACGCCGCC TTCGAACGAC TTTCGTGTCT CGCCGACGGT
TGGCTGTGGC ACGACCGGGC CATCCTGGTG CCGTGCGACG ACTCGGTGGT GCGCGCCGAC
ATGCCCGTCC GACGCTCGCG CGGCTACGCA CCGCTGCCGA TCGCGCTGCC GGTCGCGGTG
TCGCCGACAC TCGCGGTGGG CGCCGACCTG AAGAACACCA TGGCCGTCGC CGACGGCAGG
TACGCGTGGC TGAGCCAGCA CATCGGCGAC ATGGACGACC TGGCCACACT GTCCGTGTTC
GACGCGGCGC AGCAGCACCT GAGGAGGCTC ACCGCGGTCG AACCGGAGGT GCTCGTCGCC
GACGCGCACC CGCTCTACCG CTCCACGGCG TGGGCCCACC GCAACGCCGC GGGCCGTCCG
GTGCGCAGCG TGCAGCACCA CCATGCGCAC ATCGCCGCGG TGATGGCCGA ACACGGCATG
GACGGCTCTG CGCCCGTGCT CGGATTCGCC TTCGACGGAA CGGGATACGG TCCCGACGGT
GCGGTGTGGG GCGGTGAGGT GCTGCTGGCC GACTACAAGG GCTTCCAGCG GCTGGCCCGG
CTGCGTTACG TCCCGCTGGC AGGCGGCGAC GTCAGCGTGC TGCGCCCGTA CCGGATGGCG
CTCACACATC TGTGGGCCGC CGGCCTGCCG TGGACACCCG ACCTGGCACC GGTGCGGGCC
TGCCCGGCCG CCGAACAACG GGTGCTGCGG CACCAGCTCG AGACCGGCCT GGGCTGCGCG
CCCACGTCGA GCATGGGCCG GCTGTTCGAC GCGGTCTCGG CGCTGGCCGG GGTCCGTCAG
GTGGTCGACT ACGAGGCTCA GGCGGCGATC GAGTTGGAAG GTCTTGCCCG CGACGTCGGC
TGCAACGCCG ACGGCTACCG GTTCACCGTC GACCGGGAAC CTCCCACCGC GGAGATCGAC
CCGGCGCCGG TGCTGGCGGC CGTCGTGGGC GACGTCGGCT CCGGCGTCGG GTCCGGCGTC
GTCGGCGCCC GGTTCCACCA CGCCGTCGCG AGGCTGATCC TCGACCTCGC CGTCGAGCAC
CGCGGATATC CTGTGGCGCT GTCCGGCGGG GTGTTCCAGA ACGCCCTGCT ACTCCGGACG
GCGCAAACGC TTTTGGTGGA CAACGGGTTC GAGGTGATCA CCCACCGCCA CGTCCCGCCG
AACGACGGCG GCATCGCGTT GGGGCAACTC ATCGTAGGAA ACACCGCCTG A
|
|---|
| Protein sequence | MTGRRRVRID VRGVVQGVGF RPFVYTRATA LGLSGSVRND STGAIVEIEG AADDIDRFLA
RLHDHPPPLA VVESVDVRSV PLSGGTGFAI ADTSRTDGGR TLASPDVAMC ADCAAELRDP
RNRRFRHPFI NCTNCGPRFT IIAALPYDRS STTMADFPMC ADCAGEYTDP TDRRFHAQPI
CCPGCGPTLR YRDGDGRDTD GEPGLLAARR LLRDGGVLAV KGVGGYHLAC DASDRRAVAA
LRARKRRGDK PFAVMVPDID AARAIADVDP ASAALLRGPA RPIVLMQRRA GAAVDAAVAP
HNPDLGVLLT YTPLHALLLG LDGDGPGPQV LVMTSGNLGG EPICFTEDAA FERLSCLADG
WLWHDRAILV PCDDSVVRAD MPVRRSRGYA PLPIALPVAV SPTLAVGADL KNTMAVADGR
YAWLSQHIGD MDDLATLSVF DAAQQHLRRL TAVEPEVLVA DAHPLYRSTA WAHRNAAGRP
VRSVQHHHAH IAAVMAEHGM DGSAPVLGFA FDGTGYGPDG AVWGGEVLLA DYKGFQRLAR
LRYVPLAGGD VSVLRPYRMA LTHLWAAGLP WTPDLAPVRA CPAAEQRVLR HQLETGLGCA
PTSSMGRLFD AVSALAGVRQ VVDYEAQAAI ELEGLARDVG CNADGYRFTV DREPPTAEID
PAPVLAAVVG DVGSGVGSGV VGARFHHAVA RLILDLAVEH RGYPVALSGG VFQNALLLRT
AQTLLVDNGF EVITHRHVPP NDGGIALGQL IVGNTA
|
|---|
| |