| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gbem_3132 |
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| Symbol | |
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| ID | 6779991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter bemidjiensis Bem |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011146 |
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| Strand | - |
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| Start bp | 3615894 |
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| End bp | 3618170 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642769129 |
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| Product | (NiFe) hydrogenase maturation protein HypF |
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| Protein accession | YP_002139930 |
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| Protein GI | 197119503 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0068] Hydrogenase maturation factor |
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| TIGRFAM ID | [TIGR00143] [NiFe] hydrogenase maturation protein HypF |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGAGCG CGCCGGAGCG TGCCGCCATC GAGATAGGCG GCATAGTGCA GGGCGTGGGT
TTCCGCCCCT TCGTCTACCG GCTCGCCAAT CGCCTCGGCC TCTCCGGCTG GGTCCGCAAC
ACCGGTGAAG GCGTGCAGAT CGAGGTCGAG GGAGATGCCG CCGCCATAGA GGAATTTCGT
CTTGCCGTGC GCGACGAGGC GCCCCCTTTG GCGGTGATCT ACCAGCTGCG TGCGCAGCCG
ATTCCCGCGG CAGGGGCAAC CGGCTTCGCC ATCGTCGAGA GCGCCCGGAG CACCGCCGGC
GGCGAGGTCT CCCCCGATTG CGACGTCTGC GACGACTGCC TCGCCGAACT CTTCGACCCC
GATAACCGCC GCCACGGCTA CCCATTCATC AACTGCACCA ACTGCGGCCC GCGCTATTCC
ATCATCACCG GCATCCCCTA CGACCGCCCC GCCACCACCA TGGCAGGCTT CGCCATGTGC
GACGACTGCC TGGCCGAATA CCACGATCCC GGCAACCGGC GCTTCCACGC GCAACCAAAC
GCCTGCCCGG TCTGCGGTCC GCATTTGTCC CTTTTGGAGC CAAGCGGCGC CCCGGTCTGC
GGCGACGCGC TCAAGCTGGC GCTGGAGGCG CTCTCCCAAG GGAAGATCGT AGCGGTGAAG
GGTGTAGGAG GGTACCACCT GGCGGTGGAC GCCGGCAACC AGGCTGCGGT GGAGCGGCTG
AGGCAGCGTA AAAGGCGCGA TGAGAAGCCC TTTGCCATGC TGGCGGCCGA CCTCGAAATG
GTGCGCCGTC ACGCGCACTG TTCCGAGCTG GAGGGACGGC TGCTGCTCGG GGTTGAGCGC
CCCATCGTGC TGATGAGGAA ACTTGCCGGC TCCTCAATCA GCGACCTGGT CGCTCCCGGC
AACGGGTGGT TCGGGTTCAT GCTGCCGGGA AACCCGCTGC AGCATCTGCT GGCCAGAGGC
CACGGCGCCC CCCTGGTCAT GACCAGCGGC AATCTCTCCG ACGAGCCGAT CGCCTACCGG
GACGGCGAGG CGCTGGAGAT GCTCTCCGGC ATCGCCGACC TTTTCCTCAC CCACGACCGG
GAGATCCATA CCCGCACCGA CGATTCGGTG CTCCGCCTCT ACCGGGGGGA GCCGCTTTTC
CTGCGTCGCT CGCGCGGTTA CGTGCCGCGC GCCGTGCAAC TGCCGGCAGA ACAGGCAAGC
GTTCTCGCCG TCGGGGGCGA ACTGAAGGCG ACCCTTTGCC TTACCCGCGG GGACCGGGCT
TTCATGAGCC AGCATATCGG CGATCTCAAG AACGCGGCGA CGCTGGCGTC CCTGGAACAG
AGCGCGTCGG ACCTGCAGAG CCTTTTGGAG ATAACACCTG CGCTGGTGGC GCATGACCTG
CACCCGGACT ATCTCTCCAC CCACTACGCT ACCGCTCTCG GGCTTCCGGC CGTGGGGGTG
CAGCACCACC ACGCCCACAT GGCCTCCTGC ATGGCGGAGA ACGGGTTGGA GGGCGAAGTC
ATAGGAGTCA TCCTGGACGG CACCGGCTAC GGGACCGACG GCACCACCTG GGGGGGCGAG
TTCCTGGTGG GCGGCTACAG CCGCTTCGAA AGGCACGCGC ACTTTGCCCC GTTGAGGCTG
CCTGGGGGGG ATGCTGCCGT TAAGGAGCCG TACCGCATGG CGCTCTCGGC GCTCTACTCC
CTGCACGGCG ACCGACTTTT CGATCAGCCG CCGGCGGTTC TTTCCGAAGT GGCGCAGGCC
GACCGGCCGC TCTTTTTGAA GATGCTGGAG AAAGGGATCA ACTCCCCGCT CACTTCGAGT
TGCGGCCGGC TCTTCGATGC CGTGTCCGCC TTGATCGGCG TGCGCAGCCG CATCAGCTAC
GAGGGGCAGG CGGCCATCGA GCTGGAGGCC CTGGCCGAAC AGGGGGGGGA GGTGGAGCCC
TACCCGTGCC AGGTGCGGGA AGAGTGGGGG CACGTTTTGG ATTTTGCTCC CGCCATCGCC
GCCATCTGTG CCGACCTTGC CCGGGGGAGA AGCCGCGCCG ATATCGCGCG CGCTTTCCAC
CGCACCGTAG CCCGCGGCGT TCTCGACGTC TGCCGCAGGC TGCGGGAGGA GACTGGCTAC
GTGAGGGTGG TGCTCTCCGG GGGGGTATTC CAGAACCGGC TCCTGACCGA GGAGGTGGCG
GAGTTGCTGG CAGGCGATGC GTTCCAGGTC TACTGCCACC GGTTAGTCCC ACCGAACGAC
GGCGGGCTCG CCTTGGGCCA GGCGGCGATA GCCGGGACGA TGCAGGCCCG CGGTTAG
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| Protein sequence | MQSAPERAAI EIGGIVQGVG FRPFVYRLAN RLGLSGWVRN TGEGVQIEVE GDAAAIEEFR
LAVRDEAPPL AVIYQLRAQP IPAAGATGFA IVESARSTAG GEVSPDCDVC DDCLAELFDP
DNRRHGYPFI NCTNCGPRYS IITGIPYDRP ATTMAGFAMC DDCLAEYHDP GNRRFHAQPN
ACPVCGPHLS LLEPSGAPVC GDALKLALEA LSQGKIVAVK GVGGYHLAVD AGNQAAVERL
RQRKRRDEKP FAMLAADLEM VRRHAHCSEL EGRLLLGVER PIVLMRKLAG SSISDLVAPG
NGWFGFMLPG NPLQHLLARG HGAPLVMTSG NLSDEPIAYR DGEALEMLSG IADLFLTHDR
EIHTRTDDSV LRLYRGEPLF LRRSRGYVPR AVQLPAEQAS VLAVGGELKA TLCLTRGDRA
FMSQHIGDLK NAATLASLEQ SASDLQSLLE ITPALVAHDL HPDYLSTHYA TALGLPAVGV
QHHHAHMASC MAENGLEGEV IGVILDGTGY GTDGTTWGGE FLVGGYSRFE RHAHFAPLRL
PGGDAAVKEP YRMALSALYS LHGDRLFDQP PAVLSEVAQA DRPLFLKMLE KGINSPLTSS
CGRLFDAVSA LIGVRSRISY EGQAAIELEA LAEQGGEVEP YPCQVREEWG HVLDFAPAIA
AICADLARGR SRADIARAFH RTVARGVLDV CRRLREETGY VRVVLSGGVF QNRLLTEEVA
ELLAGDAFQV YCHRLVPPND GGLALGQAAI AGTMQARG
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