More than 300 homologs were found in PanDaTox collection
for query gene Slin_6527 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_6527  two component transcriptional regulator, LuxR family  100 
 
 
215 aa  443  1e-123  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_2387  two component transcriptional regulator, LuxR family  34.58 
 
 
207 aa  143  2e-33  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.132486  normal  0.384012 
 
 
-
 
NC_013037  Dfer_4502  two component transcriptional regulator, LuxR family  36.62 
 
 
205 aa  142  5e-33  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.438194 
 
 
-
 
NC_013037  Dfer_1698  two component transcriptional regulator, LuxR family  37.02 
 
 
207 aa  141  6e-33  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal  0.126193 
 
 
-
 
NC_009441  Fjoh_1987  two component LuxR family transcriptional regulator  34.11 
 
 
213 aa  139  3e-32  Flavobacterium johnsoniae UW101  Bacteria  normal  0.429674  n/a   
 
 
-
 
NC_013132  Cpin_4551  two component transcriptional regulator, LuxR family  33.64 
 
 
208 aa  137  1e-31  Chitinophaga pinensis DSM 2588  Bacteria  decreased coverage  0.000124934  normal  0.0275678 
 
 
-
 
NC_013132  Cpin_2137  two component transcriptional regulator, LuxR family  38.28 
 
 
211 aa  133  1.9999999999999998e-30  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0335187  normal 
 
 
-
 
NC_013061  Phep_2962  response regulator receiver  33.8 
 
 
206 aa  130  2.0000000000000002e-29  Pedobacter heparinus DSM 2366  Bacteria  normal  0.117851  normal 
 
 
-
 
NC_013730  Slin_5409  two component transcriptional regulator, LuxR family  34.7 
 
 
223 aa  128  6e-29  Spirosoma linguale DSM 74  Bacteria  hitchhiker  0.00220575  normal 
 
 
-
 
NC_010725  Mpop_3747  two component transcriptional regulator, LuxR family  32.09 
 
 
221 aa  128  8.000000000000001e-29  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_4664  two component LuxR family transcriptional regulator  31.96 
 
 
219 aa  127  2.0000000000000002e-28  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_2735  response regulator receiver  34.12 
 
 
224 aa  125  4.0000000000000003e-28  Pedobacter heparinus DSM 2366  Bacteria  normal  0.0572845  normal 
 
 
-
 
NC_008009  Acid345_4290  two component LuxR family transcriptional regulator  31.94 
 
 
218 aa  125  4.0000000000000003e-28  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_0105  two component LuxR family transcriptional regulator  34.42 
 
 
215 aa  125  4.0000000000000003e-28  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.0303042  normal  0.309888 
 
 
-
 
NC_010718  Nther_2325  two component transcriptional regulator, LuxR family  33.02 
 
 
228 aa  125  5e-28  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1743  two component transcriptional regulator, LuxR family  33.18 
 
 
214 aa  125  6e-28  Eggerthella lenta DSM 2243  Bacteria  normal  0.370009  normal  0.039988 
 
 
-
 
NC_002939  GSU1293  LuxR family DNA-binding response regulator  34.45 
 
 
216 aa  124  8.000000000000001e-28  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  31.19 
 
 
222 aa  124  8.000000000000001e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.280021 
 
 
-
 
NC_009632  SaurJH1_2463  response regulator receiver  31.94 
 
 
217 aa  123  2e-27  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_2415  two component LuxR family transcriptional regulator  31.94 
 
 
217 aa  123  2e-27  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_013170  Ccur_06630  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  34.1 
 
 
215 aa  123  2e-27  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.252447  normal  0.303532 
 
 
-
 
NC_013132  Cpin_4278  two component transcriptional regulator, LuxR family  34.74 
 
 
213 aa  122  4e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.0894003 
 
 
-
 
NC_013132  Cpin_1732  two component transcriptional regulator, LuxR family  36.49 
 
 
211 aa  122  4e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_013730  Slin_5845  two component transcriptional regulator, LuxR family  32.39 
 
 
219 aa  122  5e-27  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.715181 
 
 
-
 
NC_013132  Cpin_2907  two component transcriptional regulator, LuxR family  31.25 
 
 
222 aa  122  5e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0590247  normal 
 
 
-
 
NC_013132  Cpin_1440  two component transcriptional regulator, LuxR family  33.8 
 
 
208 aa  122  5e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010718  Nther_0648  two component transcriptional regulator, LuxR family  33.65 
 
 
215 aa  122  6e-27  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_3163  two component LuxR family transcriptional regulator  33.49 
 
 
203 aa  122  6e-27  Pelobacter propionicus DSM 2379  Bacteria  normal  0.932633  n/a   
 
 
-
 
NC_013037  Dfer_2963  two component transcriptional regulator, LuxR family  30.56 
 
 
219 aa  120  9.999999999999999e-27  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_013132  Cpin_2103  two component transcriptional regulator, LuxR family  33.49 
 
 
210 aa  120  9.999999999999999e-27  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_1667  two component LuxR family transcriptional regulator  33.8 
 
 
219 aa  120  9.999999999999999e-27  Pseudomonas putida GB-1  Bacteria  normal  normal  0.869411 
 
 
-
 
NC_009512  Pput_3615  two component LuxR family transcriptional regulator  33.33 
 
 
219 aa  120  1.9999999999999998e-26  Pseudomonas putida F1  Bacteria  normal  0.378192  normal  0.274637 
 
 
-
 
NC_002947  PP_2126  LuxR family DNA-binding response regulator  33.95 
 
 
219 aa  120  1.9999999999999998e-26  Pseudomonas putida KT2440  Bacteria  normal  0.118459  normal  0.107719 
 
 
-
 
NC_008576  Mmc1_2093  two component LuxR family transcriptional regulator  31.51 
 
 
206 aa  120  1.9999999999999998e-26  Magnetococcus sp. MC-1  Bacteria  hitchhiker  0.000328625  normal  0.180863 
 
 
-
 
NC_010511  M446_5717  two component LuxR family transcriptional regulator  30.37 
 
 
220 aa  120  1.9999999999999998e-26  Methylobacterium sp. 4-46  Bacteria  normal  0.873964  hitchhiker  0.00405289 
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  30.88 
 
 
218 aa  119  3e-26  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0622  transcriptional regulator UhpA  33.33 
 
 
208 aa  119  3.9999999999999996e-26  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_0905  putative nitrate/nitrite DNA-binding response regulator  34.29 
 
 
206 aa  119  3.9999999999999996e-26  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0826046  hitchhiker  0.00000533581 
 
 
-
 
NC_010506  Swoo_3747  two component LuxR family transcriptional regulator  28.23 
 
 
206 aa  118  7e-26  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_1317  response regulator  30.37 
 
 
220 aa  118  7.999999999999999e-26  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.500574  normal  0.0503905 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  31.78 
 
 
221 aa  117  9.999999999999999e-26  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_013510  Tcur_0154  two component transcriptional regulator, LuxR family  30 
 
 
244 aa  117  9.999999999999999e-26  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1260  putative nitrate/nitrite DNA-binding response regulator  33.81 
 
 
206 aa  117  1.9999999999999998e-25  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007948  Bpro_4296  two component LuxR family transcriptional regulator  31.48 
 
 
214 aa  117  1.9999999999999998e-25  Polaromonas sp. JS666  Bacteria  normal  0.891496  normal 
 
 
-
 
NC_013132  Cpin_5476  two component transcriptional regulator, LuxR family  33.49 
 
 
219 aa  117  1.9999999999999998e-25  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.21854 
 
 
-
 
NC_008789  Hhal_0023  two component LuxR family transcriptional regulator  32.86 
 
 
216 aa  117  1.9999999999999998e-25  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009441  Fjoh_0036  two component LuxR family transcriptional regulator  31.13 
 
 
221 aa  116  3e-25  Flavobacterium johnsoniae UW101  Bacteria  normal  0.0464925  n/a   
 
 
-
 
NC_009952  Dshi_2345  two component transcriptional regulator  32.21 
 
 
220 aa  115  3.9999999999999997e-25  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.499423  normal  0.134206 
 
 
-
 
NC_013385  Adeg_1034  two component transcriptional regulator, LuxR family  32.66 
 
 
213 aa  115  3.9999999999999997e-25  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1311  two component transcriptional regulator, LuxR family  33.65 
 
 
226 aa  115  5e-25  Thauera sp. MZ1T  Bacteria  normal  0.165019  n/a   
 
 
-
 
NC_011071  Smal_1526  two component transcriptional regulator, LuxR family  31.82 
 
 
215 aa  115  6e-25  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.88337  normal 
 
 
-
 
NC_013739  Cwoe_1298  two component transcriptional regulator, LuxR family  31.78 
 
 
228 aa  115  6e-25  Conexibacter woesei DSM 14684  Bacteria  normal  0.70055  normal 
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  32.56 
 
 
215 aa  114  7.999999999999999e-25  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_011662  Tmz1t_1954  two component transcriptional regulator, LuxR family  30.33 
 
 
220 aa  114  8.999999999999998e-25  Thauera sp. MZ1T  Bacteria  normal  0.228638  n/a   
 
 
-
 
NC_009457  VC0395_A0896  LuxR family transcriptional regulator  33.33 
 
 
216 aa  114  1.0000000000000001e-24  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2491  LuxR response regulator receiver  33.67 
 
 
242 aa  114  1.0000000000000001e-24  Thermobifida fusca YX  Bacteria  normal  0.470277  n/a   
 
 
-
 
NC_007519  Dde_2674  two component LuxR family transcriptional regulator  34.09 
 
 
215 aa  114  1.0000000000000001e-24  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.721789  n/a   
 
 
-
 
NC_007947  Mfla_1987  two component LuxR family transcriptional regulator  32.09 
 
 
215 aa  114  1.0000000000000001e-24  Methylobacillus flagellatus KT  Bacteria  normal  0.0949899  normal 
 
 
-
 
NC_008146  Mmcs_0590  two component LuxR family transcriptional regulator  30.23 
 
 
215 aa  114  1.0000000000000001e-24  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0603  two component LuxR family transcriptional regulator  30.23 
 
 
215 aa  114  1.0000000000000001e-24  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  32.66 
 
 
216 aa  114  1.0000000000000001e-24  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0581  two component LuxR family transcriptional regulator  30.23 
 
 
215 aa  114  1.0000000000000001e-24  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU0254  LuxR family DNA-binding response regulator  33.49 
 
 
215 aa  114  2.0000000000000002e-24  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011894  Mnod_0855  two component transcriptional regulator, LuxR family  29.33 
 
 
223 aa  113  2.0000000000000002e-24  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.082304  n/a   
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  29.55 
 
 
224 aa  114  2.0000000000000002e-24  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013440  Hoch_1846  two component transcriptional regulator, LuxR family  32.73 
 
 
212 aa  113  2.0000000000000002e-24  Haliangium ochraceum DSM 14365  Bacteria  normal  0.349565  normal  0.2019 
 
 
-
 
NC_009441  Fjoh_4628  two component LuxR family transcriptional regulator  32.57 
 
 
219 aa  114  2.0000000000000002e-24  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1194  two component transcriptional regulator, LuxR family  32.56 
 
 
217 aa  112  3e-24  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.272513  n/a   
 
 
-
 
NC_007298  Daro_2343  two component LuxR family transcriptional regulator  33.49 
 
 
211 aa  112  3e-24  Dechloromonas aromatica RCB  Bacteria  normal  0.999882  normal  0.0841394 
 
 
-
 
NC_007492  Pfl01_3957  two component LuxR family transcriptional regulator  32.55 
 
 
219 aa  112  3e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0679  two component LuxR family transcriptional regulator  32.26 
 
 
213 aa  112  3e-24  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_1167  two component LuxR family transcriptional regulator  31.02 
 
 
213 aa  112  3e-24  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_011830  Dhaf_1205  two component transcriptional regulator, LuxR family  33.01 
 
 
212 aa  112  4.0000000000000004e-24  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1684  response regulator receiver protein  30.48 
 
 
207 aa  112  5e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.966789 
 
 
-
 
NC_013205  Aaci_0385  two component transcriptional regulator, LuxR family  29.11 
 
 
224 aa  112  5e-24  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_1103  two component transcriptional regulator, LuxR family  31.1 
 
 
216 aa  112  5e-24  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011071  Smal_1888  two component transcriptional regulator, LuxR family  30.66 
 
 
212 aa  112  5e-24  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal  0.265772 
 
 
-
 
NC_009972  Haur_0983  two component LuxR family transcriptional regulator  31.94 
 
 
213 aa  112  5e-24  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013456  VEA_003136  transcriptional regulator LuxR family protein  34.6 
 
 
212 aa  112  6e-24  Vibrio sp. Ex25  Bacteria  normal  0.12843  n/a   
 
 
-
 
NC_003910  CPS_1406  DNA-binding response regulator  32.54 
 
 
215 aa  111  8.000000000000001e-24  Colwellia psychrerythraea 34H  Bacteria  normal  0.253896  n/a   
 
 
-
 
NC_007298  Daro_1572  two component LuxR family transcriptional regulator  30.94 
 
 
218 aa  111  8.000000000000001e-24  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.972408 
 
 
-
 
NC_010002  Daci_5322  two component LuxR family transcriptional regulator  29.52 
 
 
220 aa  111  8.000000000000001e-24  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.929677 
 
 
-
 
NC_013730  Slin_4823  two component transcriptional regulator, LuxR family  31.25 
 
 
214 aa  111  9e-24  Spirosoma linguale DSM 74  Bacteria  normal  0.103693  normal  0.11387 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  31.19 
 
 
216 aa  111  9e-24  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5595  two component transcriptional regulator, LuxR family  32.02 
 
 
215 aa  110  1.0000000000000001e-23  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0346  two component transcriptional regulator, LuxR family  33.5 
 
 
210 aa  110  1.0000000000000001e-23  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0205277  normal  0.823307 
 
 
-
 
NC_010627  Bphy_7764  two component LuxR family transcriptional regulator  30.48 
 
 
210 aa  110  1.0000000000000001e-23  Burkholderia phymatum STM815  Bacteria  normal  0.527093  normal 
 
 
-
 
NC_013730  Slin_6441  two component transcriptional regulator, LuxR family  29.68 
 
 
213 aa  111  1.0000000000000001e-23  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_1664  two component LuxR family transcriptional regulator  31.58 
 
 
218 aa  110  1.0000000000000001e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.49018  normal 
 
 
-
 
NC_010625  Bphy_6558  two component LuxR family transcriptional regulator  29.91 
 
 
210 aa  111  1.0000000000000001e-23  Burkholderia phymatum STM815  Bacteria  normal  normal  0.458284 
 
 
-
 
NC_013421  Pecwa_1775  two component transcriptional regulator, LuxR family  29.91 
 
 
209 aa  110  2.0000000000000002e-23  Pectobacterium wasabiae WPP163  Bacteria  normal  0.814588  n/a   
 
 
-
 
NC_004310  BR0342  LuxR family DNA-binding response regulator  29.67 
 
 
213 aa  110  2.0000000000000002e-23  Brucella suis 1330  Bacteria  normal  0.0601944  n/a   
 
 
-
 
NC_013235  Namu_3409  two component transcriptional regulator, LuxR family  32.57 
 
 
221 aa  109  2.0000000000000002e-23  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000306896  hitchhiker  0.000114505 
 
 
-
 
NC_012912  Dd1591_1895  two component transcriptional regulator, LuxR family  30.84 
 
 
213 aa  110  2.0000000000000002e-23  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_1233  two component transcriptional regulator, LuxR family  29.33 
 
 
220 aa  110  2.0000000000000002e-23  Conexibacter woesei DSM 14684  Bacteria  normal  0.681342  normal  0.792953 
 
 
-
 
NC_010184  BcerKBAB4_5205  two component LuxR family transcriptional regulator  31.66 
 
 
215 aa  110  2.0000000000000002e-23  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_009505  BOV_0358  LuxR family DNA-binding response regulator  29.67 
 
 
213 aa  110  2.0000000000000002e-23  Brucella ovis ATCC 25840  Bacteria  normal  0.363  n/a   
 
 
-
 
NC_013131  Caci_7589  two component transcriptional regulator, LuxR family  33.99 
 
 
225 aa  109  3e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.438424  normal  0.37363 
 
 
-
 
NC_011725  BCB4264_A5535  DNA-binding response regulator  30.05 
 
 
215 aa  109  3e-23  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0670  two component LuxR family transcriptional regulator  33.18 
 
 
216 aa  109  3e-23  Desulfovibrio vulgaris DP4  Bacteria  normal  0.267154  normal 
 
 
-
 
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