296 homologs were found in PanDaTox collection
for query gene SO_1113 on replicon NC_004347
Organism: Shewanella oneidensis MR-1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004347  SO_1113    100 
 
 		 468 bp  928    Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008321  Shewmr4_0946  methyl-accepting chemotaxis sensory transducer  82.03 
 
 		 2004 bp  258  1.0000000000000001e-66  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_0984  methyl-accepting chemotaxis sensory transducer  81.82 
 
 		 2004 bp  250  3e-64  Shewanella sp. MR-7  Bacteria  normal  1  normal  0.869835 
 
 
-
 
NC_008577  Shewana3_0948  methyl-accepting chemotaxis sensory transducer  80.95 
 
 		 2004 bp  218  9.999999999999999e-55  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009438  Sputcn32_0950  methyl-accepting chemotaxis sensory transducer  81.55 
 
 		 2004 bp  208  1e-51  Shewanella putrefaciens CN-32  Bacteria  normal  0.231949  n/a   
 
 
-
 
NC_009052  Sbal_0934  methyl-accepting chemotaxis sensory transducer  84.54 
 
 		 2004 bp  147  3e-33  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_3356  methyl-accepting chemotaxis sensory transducer  84.54 
 
 		 2004 bp  147  3e-33  Shewanella baltica OS223  Bacteria  normal  0.386472  normal  1 
 
 
-
 
NC_009997  Sbal195_3553  methyl-accepting chemotaxis sensory transducer  83.5 
 
 		 2004 bp  135  1.0000000000000001e-29  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009665  Shew185_3428  methyl-accepting chemotaxis sensory transducer  83.5 
 
 		 2004 bp  135  1.0000000000000001e-29  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_3950  methyl-accepting chemotaxis sensory transducer  90.24 
 
 		 1872 bp  99.6  7e-19  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009457  VC0395_A0908  methyl-accepting chemotaxis protein  90.14 
 
 		 1902 bp  85.7  0.00000000000001  Vibrio cholerae O395  Bacteria  hitchhiker  0.00000172893  n/a   
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  89.71 
 
 		 1569 bp  79.8  0.0000000000006  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_008577  Shewana3_1499  methyl-accepting chemotaxis sensory transducer  87.5 
 
 		 1455 bp  79.8  0.0000000000006  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004578  PSPTO_3753  methyl-accepting chemotaxis protein  87.34 
 
 		 1269 bp  77.8  0.000000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.642958  n/a   
 
 
-
 
NC_011313  VSAL_II0282    91.53 
 
 		 1626 bp  77.8  0.000000000003  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_010682  Rpic_0995  methyl-accepting chemotaxis sensory transducer  87.84 
 
 		 1866 bp  75.8  0.00000000001  Ralstonia pickettii 12J  Bacteria  normal  1  normal  0.203772 
 
 
-
 
NC_009438  Sputcn32_2637  methyl-accepting chemotaxis sensory transducer  87.84 
 
 		 2004 bp  75.8  0.00000000001  Shewanella putrefaciens CN-32  Bacteria  normal  0.0295827  n/a   
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  87.84 
 
 		 1569 bp  75.8  0.00000000001  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_03575  methyl-accepting chemotaxis protein  90.32 
 
 		 1578 bp  75.8  0.00000000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_4029  methyl-accepting chemotaxis sensory transducer  90.32 
 
 		 1893 bp  75.8  0.00000000001  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013457  VEA_000202  methyl-accepting chemotaxis protein  87.84 
 
 		 1431 bp  75.8  0.00000000001  Vibrio sp. Ex25  Bacteria  normal  0.856149  n/a   
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  87.84 
 
 		 1602 bp  75.8  0.00000000001  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  87.84 
 
 		 1569 bp  75.8  0.00000000001  Shewanella baltica OS223  Bacteria  normal  1  normal  0.160306 
 
 
-
 
NC_008577  Shewana3_0764  methyl-accepting chemotaxis sensory transducer  90.32 
 
 		 1863 bp  75.8  0.00000000001  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  87.67 
 
 		 1863 bp  73.8  0.00000000004  Shewanella baltica OS223  Bacteria  normal  1  hitchhiker  0.00183884 
 
 
-
 
NC_004578  PSPTO_3480  methyl-accepting chemotaxis protein  87.01 
 
 		 1602 bp  73.8  0.00000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0820031  n/a   
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  92.45 
 
 		 1569 bp  73.8  0.00000000004  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_3603  methyl-accepting chemotaxis sensory transducer  88.24 
 
 		 1893 bp  71.9  0.0000000002  Shewanella baltica OS195  Bacteria  normal  0.840663  normal  1 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  86.25 
 
 		 1905 bp  71.9  0.0000000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_0882  methyl-accepting chemotaxis sensory transducer  88.24 
 
 		 1893 bp  71.9  0.0000000002  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_3752  methyl-accepting chemotaxis sensory transducer  86.25 
 
 		 1872 bp  71.9  0.0000000002  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_1507  methyl-accepting chemotaxis sensory transducer  86.25 
 
 		 1455 bp  71.9  0.0000000002  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011312  VSAL_I0799  methyl-accepting chemotaxis protein  88.24 
 
 		 1875 bp  71.9  0.0000000002  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_3480  methyl-accepting chemotaxis sensory transducer  88.24 
 
 		 1893 bp  71.9  0.0000000002  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_013512  Sdel_2026  chemotaxis sensory transducer  86.25 
 
 		 1323 bp  71.9  0.0000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_3405  methyl-accepting chemotaxis sensory transducer with Cache sensor  88.24 
 
 		 1893 bp  71.9  0.0000000002  Shewanella baltica OS223  Bacteria  normal  1  normal  1 
 
 
-
 
NC_004347  SO_4557  methyl-accepting chemotaxis protein  86.08 
 
 		 1872 bp  69.9  0.0000000006  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  86.08 
 
 		 1863 bp  69.9  0.0000000006  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_013512  Sdel_2141  chemotaxis sensory transducer  86.08 
 
 		 2127 bp  69.9  0.0000000006  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_02418  hypothetical protein  87.88 
 
 		 1737 bp  67.9  0.000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009438  Sputcn32_1396  methyl-accepting chemotaxis sensory transducer  85.37 
 
 		 1647 bp  67.9  0.000000002  Shewanella putrefaciens CN-32  Bacteria  normal  0.664947  n/a   
 
 
-
 
NC_007005  Psyr_1789  chemotaxis sensory transducer  84.88 
 
 		 1641 bp  67.9  0.000000002  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.478165  decreased coverage  0.000703042 
 
 
-
 
NC_009457  VC0395_A0916  methyl-accepting chemotaxis protein  85.9 
 
 		 1632 bp  67.9  0.000000002  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000029497  n/a   
 
 
-
 
NC_009438  Sputcn32_1313  methyl-accepting chemotaxis sensory transducer  84.04 
 
 		 2028 bp  67.9  0.000000002  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_013456  VEA_003139  methyl-accepting chemotaxis protein  88.71 
 
 		 1884 bp  67.9  0.000000002  Vibrio sp. Ex25  Bacteria  normal  0.116124  n/a   
 
 
-
 
NC_013512  Sdel_0377  Nitrate and nitrite sensing domain protein  86.49 
 
 		 1986 bp  67.9  0.000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  decreased coverage  0.000413313  n/a   
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  87.14 
 
 		 1917 bp  67.9  0.000000002  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_2733  methyl-accepting chemotaxis protein  85.71 
 
 		 1458 bp  65.9  0.00000001  Colwellia psychrerythraea 34H  Bacteria  normal  0.501844  n/a   
 
 
-
 
NC_009456  VC0395_0250  methyl-accepting chemotaxis protein  85.71 
 
 		 1557 bp  65.9  0.00000001  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_004347  SO_0987  methyl-accepting chemotaxis protein  87.69 
 
 		 1665 bp  65.9  0.00000001  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_011312  VSAL_I2193  methyl-accepting chemotaxis protein  86.3 
 
 		 2094 bp  65.9  0.00000001  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  86.3 
 
 		 1863 bp  65.9  0.00000001  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_0972  methyl-accepting chemotaxis sensory transducer  87.69 
 
 		 1323 bp  65.9  0.00000001  Shewanella baltica OS185  Bacteria  normal  0.803806  n/a   
 
 
-
 
NC_008322  Shewmr7_3825  methyl-accepting chemotaxis sensory transducer  85.71 
 
 		 1872 bp  65.9  0.00000001  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_0581  methyl-accepting chemotaxis sensory transducer  87.69 
 
 		 1665 bp  65.9  0.00000001  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  91.84 
 
 		 1674 bp  65.9  0.00000001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_1322  methyl-accepting chemotaxis sensory transducer  85.71 
 
 		 2004 bp  65.9  0.00000001  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_3134  methyl-accepting chemotaxis sensory transducer  86.11 
 
 		 2004 bp  63.9  0.00000004  Shewanella baltica OS195  Bacteria  normal  0.0135223  normal  0.80442 
 
 
-
 
NC_009665  Shew185_2990  methyl-accepting chemotaxis sensory transducer  86.11 
 
 		 2004 bp  63.9  0.00000004  Shewanella baltica OS185  Bacteria  normal  0.413203  n/a   
 
 
-
 
NC_004347  SO_1056  methyl-accepting chemotaxis protein  89.29 
 
 		 1893 bp  63.9  0.00000004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013457  VEA_000496  methyl-accepting chemotaxis protein  86.76 
 
 		 1563 bp  63.9  0.00000004  Vibrio sp. Ex25  Bacteria  normal  0.0232366  n/a   
 
 
-
 
NC_013512  Sdel_1432  chemotaxis sensory transducer  85 
 
 		 1641 bp  63.9  0.00000004  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.138665  n/a   
 
 
-
 
NC_008321  Shewmr4_1442  methyl-accepting chemotaxis sensory transducer  85 
 
 		 1455 bp  63.9  0.00000004  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008322  Shewmr7_2170  methyl-accepting chemotaxis sensory transducer  86.11 
 
 		 1518 bp  63.9  0.00000004  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_2976  methyl-accepting chemotaxis sensory transducer  86.11 
 
 		 2004 bp  63.9  0.00000004  Shewanella baltica OS155  Bacteria  hitchhiker  0.000241408  n/a   
 
 
-
 
NC_009438  Sputcn32_1827  methyl-accepting chemotaxis sensory transducer  89.29 
 
 		 1509 bp  63.9  0.00000004  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00626539  n/a   
 
 
-
 
NC_008345  Sfri_3002  methyl-accepting chemotaxis sensory transducer  88.33 
 
 		 2118 bp  63.9  0.00000004  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.568622  n/a   
 
 
-
 
NC_009784  VIBHAR_04784  histidine kinase  89.29 
 
 		 1887 bp  63.9  0.00000004  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009457  VC0395_A1016  methyl-accepting chemotaxis protein  88.14 
 
 		 1692 bp  61.9  0.0000001  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_011312  VSAL_I2075  methyl-accepting chemotaxis protein  88.14 
 
 		 1089 bp  61.9  0.0000001  Aliivibrio salmonicida LFI1238  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_3237  methyl-accepting chemotaxis protein  84.81 
 
 		 2316 bp  61.9  0.0000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_009784  VIBHAR_05097  sensor protein TorS  83.16 
 
 		 1629 bp  61.9  0.0000001  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007954  Sden_2955  chemotaxis sensory transducer  85.92 
 
 		 1494 bp  61.9  0.0000001  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_010506  Swoo_1310  methyl-accepting chemotaxis sensory transducer  85.33 
 
 		 1494 bp  61.9  0.0000001  Shewanella woodyi ATCC 51908  Bacteria  normal  0.615607  normal  1 
 
 
-
 
NC_011312  VSAL_I2601    85.92 
 
 		 1625 bp  61.9  0.0000001  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.0774495  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  85.92 
 
 		 1905 bp  61.9  0.0000001  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012912  Dd1591_2327  methyl-accepting chemotaxis sensory transducer  84.81 
 
 		 1968 bp  61.9  0.0000001  Dickeya zeae Ech1591  Bacteria  normal  0.716134  n/a   
 
 
-
 
NC_009438  Sputcn32_0796  methyl-accepting chemotaxis sensory transducer  84.81 
 
 		 1863 bp  61.9  0.0000001  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009438  Sputcn32_2422  methyl-accepting chemotaxis sensory transducer  85.92 
 
 		 1455 bp  61.9  0.0000001  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_0113  methyl-accepting chemotaxis sensory transducer  94.74 
 
 		 1680 bp  60  0.0000006  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014248  Aazo_0415  methyl-accepting chemotaxis sensory transducer  87.1 
 
 		 2253 bp  60  0.0000006  'Nostoc azollae' 0708  Bacteria  normal  1  n/a   
 
 
-
 
NC_007954  Sden_1600  chemotaxis sensory transducer  82.98 
 
 		 1617 bp  60  0.0000006  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00759873  n/a   
 
 
-
 
NC_007954  Sden_2239  chemotaxis sensory transducer  85.14 
 
 		 1947 bp  60  0.0000006  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_008321  Shewmr4_3174  methyl-accepting chemotaxis sensory transducer  87.1 
 
 		 1863 bp  60  0.0000006  Shewanella sp. MR-4  Bacteria  normal  0.733563  normal  0.773778 
 
 
-
 
NC_008322  Shewmr7_0792  methyl-accepting chemotaxis sensory transducer  87.1 
 
 		 1863 bp  60  0.0000006  Shewanella sp. MR-7  Bacteria  normal  0.912748  normal  0.850506 
 
 
-
 
NC_009654  Mmwyl1_3730  methyl-accepting chemotaxis sensory transducer  85.14 
 
 		 1590 bp  60  0.0000006  Marinomonas sp. MWYL1  Bacteria  normal  1  hitchhiker  0.000000264918 
 
 
-
 
NC_008700  Sama_2528  putative methyl-accepting chemotaxis sensory transducer  86.36 
 
 		 1998 bp  60  0.0000006  Shewanella amazonensis SB2B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013421  Pecwa_3123  methyl-accepting chemotaxis sensory transducer  94.74 
 
 		 1668 bp  60  0.0000006  Pectobacterium wasabiae WPP163  Bacteria  decreased coverage  0.000142041  n/a   
 
 
-
 
NC_009783  VIBHAR_01884  hypothetical protein  86.15 
 
 		 1884 bp  58  0.000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009665  Shew185_3494  methyl-accepting chemotaxis sensory transducer  86.89 
 
 		 1665 bp  58  0.000002  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_1002    86.89 
 
 		 1566 bp  58  0.000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0783817  n/a   
 
 
-
 
NC_009052  Sbal_0870  methyl-accepting chemotaxis sensory transducer  86.89 
 
 		 1665 bp  58  0.000002  Shewanella baltica OS155  Bacteria  normal  0.0571565  n/a   
 
 
-
 
NC_009438  Sputcn32_2347  methyl-accepting chemotaxis sensory transducer  86.15 
 
 		 1602 bp  58  0.000002  Shewanella putrefaciens CN-32  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  84.93 
 
 		 1863 bp  58  0.000002  Shewanella baltica OS195  Bacteria  normal  1  normal  0.35347 
 
 
-
 
NC_009052  Sbal_3371  methyl-accepting chemotaxis sensory transducer  86.15 
 
 		 1323 bp  58  0.000002  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_1091  methyl-accepting chemotaxis sensory transducer with Cache sensor  84.42 
 
 		 1857 bp  58  0.000002  Ralstonia pickettii 12D  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009901  Spea_3266  methyl-accepting chemotaxis sensory transducer  86.15 
 
 		 1632 bp  58  0.000002  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_008345  Sfri_0216  methyl-accepting chemotaxis sensory transducer  88.68 
 
 		 1947 bp  58  0.000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  83.95 
 
 		 1638 bp  58  0.000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  89.8 
 
 		 1674 bp  58  0.000002  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
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