| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VC0395_A1016 |
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| Symbol | |
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| ID | 5137379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio cholerae O395 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009457 |
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| Strand | + |
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| Start bp | 1054867 |
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| End bp | 1056558 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640532474 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_001216962 |
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| Protein GI | 147673332 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATGGT TTAATAATTT ATCGATTACC CAAAAAATGA TTGCTCTGGT TGGGTGTTTA
CTTGCTCTAA CGTTAATGGT TTCCACTTAT TCTATTACTA AGATGAAACG AGTAGCGGTT
GAGATAGAGG CGATAGCTCA CGATAACTTA CCTTTAGCCA AATTGATGAC CGACATGACC
GTTCATCAAC TCGAAGGGGC GATTACTCTT GAACGAGTCT TCCGCGCAGC AGGCATCGAA
AGTAGTCAAG GCAAGCAGCA GCAAAATCAG TATCAAGCAC AGCTCATGGA GTTAGTGAAT
AAATTCAAGC AAGAATTTAA CCAATCTCGT CAACTACTTG AATCTTCTAT AGAACATACG
ATTTCCCCCT CAATACGTAG CTATCTGGCT AATCTAGAGC AAGACCTTGA CTCATTAGGT
CGTGAACATG AAGAATTTGA AAGAAAGCTC AATGAGTTGC TGAATGAACT TCGTTCTGGC
AGAGAGGTTA AATTATTAGT AGCAGATGCC GAGCAGATTG AACAATTACA AATCAGCCTA
GATCAGCGTT TAATCGATAT TCTGCGTAAA ATCGAGCAAG CAACTGAGCA ATCTGTCTTA
GTGACAGAGC AAGAAGAACG TGAGGCGCTA TGGGGAATGA TTTATTTAAG CGCCTTTGCG
ATTTTATTCG GGTTAATTCT CGGGTTTGCG TTTAGTAAAC AAATCGTTAT GGCGATTGCT
AGAGCCCGTA AGTTGGCCAA TGAAATGGCT GAAGGAAATT TTAGCAAGCG AGCTAAAGTC
ACTACAGGTG ACGAAATTGG CCAGCTCATT ACCAGTATGA ATACCATGGC TCAATCTCTG
AGCCACATCG TCGGTGAGGT AATAGACAGA GCAAATACGA TTGCCTCAAC CGTGACACAA
CTTGCTTCTT CGGCAGAAAG CAATAAGAAG TCAGTACAAC AGCAGCAAGC CAATACAGAA
CAAGTCACCA GCGCAATGGC GCAAATGGCA ATCACGATTA CGGAAGTGGC GAGCAGTGCG
GAAGAGTCCT CCGCTGCGAC AGCAAGGGCA CAGGAAAATG CACGCTACAG CTGCGATGTC
TTGGGTAAAA CTGAGACGGT TTCTAGTCAA TTGGTTGCTA ATGCCCAGCA ATCACAGCAA
ATGATTGTTG AGTTAGAGGC CAGTACTCGG CAGATCGAAA GTTTTGTGTT AGTCGTAGAA
GGAATTTCGG AACAAACTAA CCTACTGGCT TTAAATGCAG CGATCGAAGC GGCGCGTGCC
GGTGAACAAG GCCGTGGATT TGCTGTGGTT GCGGATGAGG TGCGAGCTCT GGCATCTCGC
AGCCAACAGG CAACACATGA AATTAAGGGC TTGATCCAGA CCTTAGTGGA ACGTGCGCAA
TCGGCTACTA AGATGATTGA CTCAAGCGAT CGTCAGATAG AAGAAAGCTT TTCATCGATT
ACCGCCGCAA AAAAACAGCT CGATTCGATT AATCTTGCTC TTCTAGAACT CACGTCCGCC
AATACCCAAG TAGCGGCAGC CAGTGAGGAA CAATCGGTTG CCGCAGATGA GATTAGCCAC
AACATGACGG ATATTCGCGA TGCTGGGGAA ACCATCATGC TCAGTGCACA AGAAACGGCT
CAAGCGAGTG AAGAGTTGGC ACAACAAGCC CAAGGATTAA AATTATTGAT GGGACGCTTT
GTTATTTCGT AA
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| Protein sequence | MKWFNNLSIT QKMIALVGCL LALTLMVSTY SITKMKRVAV EIEAIAHDNL PLAKLMTDMT
VHQLEGAITL ERVFRAAGIE SSQGKQQQNQ YQAQLMELVN KFKQEFNQSR QLLESSIEHT
ISPSIRSYLA NLEQDLDSLG REHEEFERKL NELLNELRSG REVKLLVADA EQIEQLQISL
DQRLIDILRK IEQATEQSVL VTEQEEREAL WGMIYLSAFA ILFGLILGFA FSKQIVMAIA
RARKLANEMA EGNFSKRAKV TTGDEIGQLI TSMNTMAQSL SHIVGEVIDR ANTIASTVTQ
LASSAESNKK SVQQQQANTE QVTSAMAQMA ITITEVASSA EESSAATARA QENARYSCDV
LGKTETVSSQ LVANAQQSQQ MIVELEASTR QIESFVLVVE GISEQTNLLA LNAAIEAARA
GEQGRGFAVV ADEVRALASR SQQATHEIKG LIQTLVERAQ SATKMIDSSD RQIEESFSSI
TAAKKQLDSI NLALLELTSA NTQVAAASEE QSVAADEISH NMTDIRDAGE TIMLSAQETA
QASEELAQQA QGLKLLMGRF VIS
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