More than 300 homologs were found in PanDaTox collection
for query gene VC0395_A1016 on replicon NC_009457
Organism: Vibrio cholerae O395



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009457  VC0395_A1016  methyl-accepting chemotaxis protein  100 
 
 
563 aa  1121    Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3697  methyl-accepting chemotaxis sensory transducer  43.77 
 
 
566 aa  436  1e-121  Shewanella baltica OS195  Bacteria  normal  normal  0.380844 
 
 
-
 
NC_011663  Sbal223_3506  methyl-accepting chemotaxis sensory transducer  43.75 
 
 
566 aa  434  1e-120  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3574  methyl-accepting chemotaxis sensory transducer  43.75 
 
 
566 aa  433  1e-120  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0809  methyl-accepting chemotaxis sensory transducer  43.97 
 
 
566 aa  405  1e-111  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0837  methyl-accepting chemotaxis sensory transducer  43.06 
 
 
566 aa  380  1e-104  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_3130  methyl-accepting chemotaxis sensory transducer  42.7 
 
 
566 aa  375  1e-103  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  31.59 
 
 
555 aa  229  1e-58  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  38.29 
 
 
647 aa  208  3e-52  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  37.6 
 
 
647 aa  206  7e-52  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0444  methyl-accepting chemotaxis sensory transducer  37.97 
 
 
647 aa  204  4e-51  Pseudomonas putida W619  Bacteria  normal  0.414929  normal 
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  28.7 
 
 
557 aa  202  9.999999999999999e-51  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  37.4 
 
 
739 aa  201  3.9999999999999996e-50  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  38.6 
 
 
647 aa  199  2.0000000000000003e-49  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  38.67 
 
 
638 aa  197  5.000000000000001e-49  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  36.96 
 
 
633 aa  197  5.000000000000001e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  36.92 
 
 
640 aa  197  6e-49  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  36.89 
 
 
640 aa  196  9e-49  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  32.91 
 
 
642 aa  194  3e-48  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  38.07 
 
 
638 aa  193  7e-48  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  38.26 
 
 
650 aa  193  9e-48  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_009784  VIBHAR_05691  histidine kinase  36.47 
 
 
538 aa  192  1e-47  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_0447  chemotaxis sensory transducer  29.31 
 
 
541 aa  191  2.9999999999999997e-47  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  37.76 
 
 
638 aa  191  2.9999999999999997e-47  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  37.75 
 
 
620 aa  190  5.999999999999999e-47  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  32.4 
 
 
642 aa  190  5.999999999999999e-47  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  39.13 
 
 
647 aa  190  7e-47  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  36.89 
 
 
619 aa  190  7e-47  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  35.81 
 
 
634 aa  189  8e-47  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  36.34 
 
 
629 aa  188  2e-46  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  33.62 
 
 
773 aa  188  2e-46  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
634 aa  188  2e-46  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3284  methyl-accepting chemotaxis sensory transducer  28.37 
 
 
522 aa  187  3e-46  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5160  methyl-accepting chemotaxis protein  38.81 
 
 
647 aa  188  3e-46  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.391343  n/a   
 
 
-
 
NC_007492  Pfl01_4192  chemotaxis sensory transducer  37.34 
 
 
654 aa  187  4e-46  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  34.82 
 
 
638 aa  187  6e-46  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  37.35 
 
 
572 aa  186  7e-46  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  37.32 
 
 
638 aa  186  1.0000000000000001e-45  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  37.76 
 
 
638 aa  185  1.0000000000000001e-45  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  28.94 
 
 
581 aa  185  2.0000000000000003e-45  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  35.04 
 
 
552 aa  184  3e-45  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  37.71 
 
 
552 aa  184  4.0000000000000006e-45  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  36.33 
 
 
541 aa  184  4.0000000000000006e-45  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2511  methyl-accepting chemotaxis protein  32.65 
 
 
653 aa  183  7e-45  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295069  n/a   
 
 
-
 
NC_010501  PputW619_1254  methyl-accepting chemotaxis sensory transducer  35.45 
 
 
639 aa  183  7e-45  Pseudomonas putida W619  Bacteria  normal  0.523103  normal  0.0331864 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
634 aa  183  7e-45  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5554  methyl-accepting chemotaxis protein  33.53 
 
 
676 aa  183  9.000000000000001e-45  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0466  methyl-accepting chemotaxis protein  29.15 
 
 
541 aa  182  1e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0379  histidine kinase, HAMP region: chemotaxis sensory transducer  39.22 
 
 
647 aa  182  1e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.454626  normal 
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  33.81 
 
 
541 aa  182  1e-44  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009092  Shew_2954  methyl-accepting chemotaxis sensory transducer  35.59 
 
 
620 aa  182  1e-44  Shewanella loihica PV-4  Bacteria  decreased coverage  0.000679912  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  37.88 
 
 
637 aa  182  1e-44  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_008609  Ppro_3147  methyl-accepting chemotaxis sensory transducer  29.07 
 
 
540 aa  181  2.9999999999999997e-44  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0302394  n/a   
 
 
-
 
NC_007005  Psyr_4706  histidine kinase, HAMP region: chemotaxis sensory transducer  29.51 
 
 
541 aa  181  2.9999999999999997e-44  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  36.13 
 
 
637 aa  181  2.9999999999999997e-44  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_008463  PA14_43220  putative methyl-accepting chemotaxis transducer  37.64 
 
 
652 aa  180  4.999999999999999e-44  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.625872 
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  32.4 
 
 
681 aa  179  1e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  32.9 
 
 
568 aa  179  1e-43  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  35.63 
 
 
621 aa  179  1e-43  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  34 
 
 
540 aa  178  2e-43  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_5093  histidine kinase, HAMP region: chemotaxis sensory transducer  32.37 
 
 
676 aa  179  2e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  30.89 
 
 
620 aa  178  2e-43  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  32.14 
 
 
676 aa  177  5e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  36.21 
 
 
640 aa  177  5e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0792  methyl-accepting chemotaxis sensory transducer  36.13 
 
 
620 aa  177  6e-43  Shewanella sp. MR-7  Bacteria  normal  0.912748  normal  0.850506 
 
 
-
 
NC_007005  Psyr_4218  histidine kinase, HAMP region: chemotaxis sensory transducer  34.77 
 
 
541 aa  176  8e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_008577  Shewana3_0764  methyl-accepting chemotaxis sensory transducer  35.85 
 
 
620 aa  176  9.999999999999999e-43  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  32.31 
 
 
543 aa  176  9.999999999999999e-43  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2315  histidine kinase, HAMP region: chemotaxis sensory transducer  29.92 
 
 
653 aa  176  9.999999999999999e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.967368  normal 
 
 
-
 
NC_002939  GSU2942  methyl-accepting chemotaxis protein  29.05 
 
 
544 aa  175  1.9999999999999998e-42  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0567  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
633 aa  175  1.9999999999999998e-42  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  33.25 
 
 
541 aa  175  1.9999999999999998e-42  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  35.1 
 
 
679 aa  175  1.9999999999999998e-42  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0539  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
633 aa  175  1.9999999999999998e-42  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0563  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
633 aa  175  1.9999999999999998e-42  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009456  VC0395_0962  methyl-accepting chemotaxis protein  32.56 
 
 
643 aa  174  2.9999999999999996e-42  Vibrio cholerae O395  Bacteria  hitchhiker  0.000917898  n/a   
 
 
-
 
NC_008321  Shewmr4_3174  methyl-accepting chemotaxis sensory transducer  35.85 
 
 
620 aa  174  2.9999999999999996e-42  Shewanella sp. MR-4  Bacteria  normal  0.733563  normal  0.773778 
 
 
-
 
NC_009901  Spea_3169  methyl-accepting chemotaxis sensory transducer  32.97 
 
 
620 aa  174  3.9999999999999995e-42  Shewanella pealeana ATCC 700345  Bacteria  normal  0.225635  n/a   
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  32.2 
 
 
712 aa  174  3.9999999999999995e-42  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_009438  Sputcn32_0796  methyl-accepting chemotaxis sensory transducer  36.03 
 
 
620 aa  174  5e-42  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  31.03 
 
 
674 aa  174  5.999999999999999e-42  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_007492  Pfl01_4266  chemotaxis sensory transducer  28.42 
 
 
546 aa  173  6.999999999999999e-42  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.261421  normal 
 
 
-
 
NC_009052  Sbal_0691  methyl-accepting chemotaxis sensory transducer  37.11 
 
 
620 aa  173  7.999999999999999e-42  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3551  methyl-accepting chemotaxis sensory transducer  37.11 
 
 
620 aa  173  7.999999999999999e-42  Shewanella baltica OS223  Bacteria  normal  hitchhiker  0.00183884 
 
 
-
 
NC_011901  Tgr7_1672  methyl-accepting chemotaxis sensory transducer  31.62 
 
 
544 aa  173  7.999999999999999e-42  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  32.2 
 
 
712 aa  173  9e-42  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  33.23 
 
 
716 aa  173  9e-42  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_009656  PSPA7_2548  putative chemotaxis transducer  37.26 
 
 
561 aa  172  1e-41  Pseudomonas aeruginosa PA7  Bacteria  normal  0.271227  n/a   
 
 
-
 
NC_004578  PSPTO_4624  methyl-accepting chemotaxis protein  33.99 
 
 
539 aa  172  1e-41  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.140064  n/a   
 
 
-
 
NC_009483  Gura_3311  methyl-accepting chemotaxis sensory transducer  34.46 
 
 
547 aa  172  1e-41  Geobacter uraniireducens Rf4  Bacteria  normal  0.691655  n/a   
 
 
-
 
NC_008740  Maqu_2789  methyl-accepting chemotaxis sensory transducer  36.3 
 
 
545 aa  172  1e-41  Marinobacter aquaeolei VT8  Bacteria  normal  0.888266  n/a   
 
 
-
 
NC_009457  VC0395_A1023  methyl-accepting chemotaxis protein  35.47 
 
 
578 aa  172  1e-41  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  33.8 
 
 
620 aa  172  1e-41  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_009665  Shew185_3619  methyl-accepting chemotaxis sensory transducer  36.1 
 
 
620 aa  172  1e-41  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  33.99 
 
 
541 aa  172  1e-41  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_009997  Sbal195_3742  methyl-accepting chemotaxis sensory transducer  35.82 
 
 
620 aa  172  2e-41  Shewanella baltica OS195  Bacteria  normal  normal  0.35347 
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  35.65 
 
 
545 aa  171  2e-41  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_009654  Mmwyl1_0877  methyl-accepting chemotaxis sensory transducer  33.62 
 
 
540 aa  172  2e-41  Marinomonas sp. MWYL1  Bacteria  normal  normal  0.11332 
 
 
-
 
NC_009654  Mmwyl1_3948  methyl-accepting chemotaxis sensory transducer  34.18 
 
 
658 aa  171  3e-41  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_1884  methyl-accepting chemotaxis sensory transducer  33.15 
 
 
547 aa  171  3e-41  Geobacter bemidjiensis Bem  Bacteria  normal  0.114501  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>