More than 300 homologs were found in PanDaTox collection
for query gene Shewana3_0809 on replicon NC_008577
Organism: Shewanella sp. ANA-3



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011663  Sbal223_3506  methyl-accepting chemotaxis sensory transducer  75.8 
 
 
566 aa  839    Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3697  methyl-accepting chemotaxis sensory transducer  76.33 
 
 
566 aa  847    Shewanella baltica OS195  Bacteria  normal  normal  0.380844 
 
 
-
 
NC_008577  Shewana3_0809  methyl-accepting chemotaxis sensory transducer  100 
 
 
566 aa  1124    Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3574  methyl-accepting chemotaxis sensory transducer  76.68 
 
 
566 aa  848    Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3130  methyl-accepting chemotaxis sensory transducer  77.18 
 
 
566 aa  798    Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0837  methyl-accepting chemotaxis sensory transducer  77.36 
 
 
566 aa  796    Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_009457  VC0395_A1016  methyl-accepting chemotaxis protein  43.83 
 
 
563 aa  409  1e-113  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0732  methyl-accepting chemotaxis sensory transducer  30.04 
 
 
555 aa  207  3e-52  Shewanella woodyi ATCC 51908  Bacteria  normal  normal  0.177926 
 
 
-
 
NC_010322  PputGB1_5071  methyl-accepting chemotaxis sensory transducer  35.18 
 
 
647 aa  201  3.9999999999999996e-50  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2966  histidine kinase, HAMP region: chemotaxis sensory transducer  34.59 
 
 
642 aa  198  2.0000000000000003e-49  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.249585  normal  0.113943 
 
 
-
 
NC_004578  PSPTO_2616  methyl-accepting chemotaxis protein  38.44 
 
 
633 aa  194  3e-48  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  decreased coverage  0.00438795  n/a   
 
 
-
 
NC_009439  Pmen_1701  methyl-accepting chemotaxis sensory transducer  38.22 
 
 
650 aa  194  3e-48  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.076135 
 
 
-
 
NC_004578  PSPTO_3098  methyl-accepting chemotaxis protein  34.59 
 
 
642 aa  193  7e-48  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.398555  n/a   
 
 
-
 
NC_002947  PP_5021  methyl-accepting chemotaxis sensory transducer  34.76 
 
 
647 aa  192  2e-47  Pseudomonas putida KT2440  Bacteria  normal  0.0828859  normal 
 
 
-
 
NC_009512  Pput_4895  methyl-accepting chemotaxis sensory transducer  34.51 
 
 
739 aa  192  2e-47  Pseudomonas putida F1  Bacteria  normal  0.247309  normal 
 
 
-
 
NC_010501  PputW619_0445  methyl-accepting chemotaxis sensory transducer  39.82 
 
 
638 aa  191  2.9999999999999997e-47  Pseudomonas putida W619  Bacteria  normal  0.455391  normal 
 
 
-
 
NC_011901  Tgr7_1674  methyl-accepting chemotaxis sensory transducer  37.9 
 
 
543 aa  191  2.9999999999999997e-47  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_5070  methyl-accepting chemotaxis sensory transducer  39.76 
 
 
638 aa  190  5e-47  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_0444  methyl-accepting chemotaxis sensory transducer  33.89 
 
 
647 aa  190  5.999999999999999e-47  Pseudomonas putida W619  Bacteria  normal  0.414929  normal 
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  37.75 
 
 
640 aa  190  7e-47  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_007005  Psyr_1798  histidine kinase, HAMP region: chemotaxis sensory transducer  35.4 
 
 
681 aa  190  8e-47  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.668901  normal  0.381267 
 
 
-
 
NC_007005  Psyr_0905  histidine kinase, HAMP region: chemotaxis sensory transducer  35.99 
 
 
640 aa  189  1e-46  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.746842  normal 
 
 
-
 
NC_007005  Psyr_2356  histidine kinase, HAMP region: chemotaxis sensory transducer  37.32 
 
 
619 aa  187  5e-46  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0809243  normal  0.398562 
 
 
-
 
NC_002947  PP_5020  methyl-accepting chemotaxis sensory transducer  39.16 
 
 
638 aa  187  6e-46  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  36.89 
 
 
773 aa  186  1.0000000000000001e-45  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_009512  Pput_4894  methyl-accepting chemotaxis sensory transducer  38.86 
 
 
638 aa  185  2.0000000000000003e-45  Pseudomonas putida F1  Bacteria  normal  0.291281  normal 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  36.1 
 
 
629 aa  184  3e-45  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_0876  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
674 aa  184  5.0000000000000004e-45  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  34.18 
 
 
559 aa  183  9.000000000000001e-45  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_5160  methyl-accepting chemotaxis protein  39.52 
 
 
647 aa  182  1e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.391343  n/a   
 
 
-
 
NC_004578  PSPTO_3680  methyl-accepting chemotaxis protein  34.41 
 
 
676 aa  180  5.999999999999999e-44  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  29.81 
 
 
541 aa  179  2e-43  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008463  PA14_67010  putative chemotaxis transducer  36.52 
 
 
647 aa  179  2e-43  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  34.29 
 
 
637 aa  177  3e-43  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  35.03 
 
 
634 aa  177  4e-43  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_3705  methyl-accepting chemotaxis sensory transducer  34.46 
 
 
541 aa  177  5e-43  Shewanella sediminis HAW-EB3  Bacteria  normal  0.0963791  normal 
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  35.96 
 
 
634 aa  177  5e-43  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_1426  methyl-accepting chemotaxis sensory transducer  35.63 
 
 
634 aa  177  6e-43  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0380  histidine kinase, HAMP region: chemotaxis sensory transducer  37.78 
 
 
638 aa  177  7e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_3284  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
522 aa  176  9.999999999999999e-43  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_3502  methyl-accepting chemotaxis sensory transducer  35.42 
 
 
620 aa  175  1.9999999999999998e-42  Shewanella sediminis HAW-EB3  Bacteria  normal  0.666992  normal  0.2901 
 
 
-
 
NC_008789  Hhal_0443  methyl-accepting chemotaxis sensory transducer  33.05 
 
 
541 aa  175  1.9999999999999998e-42  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  28.3 
 
 
552 aa  174  3.9999999999999995e-42  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_007492  Pfl01_4266  chemotaxis sensory transducer  33.25 
 
 
546 aa  173  7.999999999999999e-42  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.261421  normal 
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  35.23 
 
 
634 aa  172  1e-41  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_0580  putative methyl-accepting chemotaxis sensory transducer  34.91 
 
 
679 aa  172  1e-41  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_0379  histidine kinase, HAMP region: chemotaxis sensory transducer  38.02 
 
 
647 aa  172  2e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.454626  normal 
 
 
-
 
NC_007492  Pfl01_4192  chemotaxis sensory transducer  37.39 
 
 
654 aa  172  2e-41  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2995  methyl-accepting chemotaxis sensory transducer  30.17 
 
 
541 aa  171  2e-41  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00226615  normal  0.196783 
 
 
-
 
NC_008322  Shewmr7_3076  methyl-accepting chemotaxis sensory transducer  30.17 
 
 
541 aa  171  2e-41  Shewanella sp. MR-7  Bacteria  unclonable  0.0000214454  normal  0.805143 
 
 
-
 
NC_010814  Glov_2890  methyl-accepting chemotaxis sensory transducer  32.23 
 
 
549 aa  171  3e-41  Geobacter lovleyi SZ  Bacteria  normal  0.824592  n/a   
 
 
-
 
NC_009656  PSPA7_5811  putative chemotaxis transducer  38.02 
 
 
647 aa  171  4e-41  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_2609  putative methyl-accepting chemotaxis sensory transducer  34.05 
 
 
621 aa  171  4e-41  Shewanella amazonensis SB2B  Bacteria  normal  0.206567  normal 
 
 
-
 
NC_011146  Gbem_1884  methyl-accepting chemotaxis sensory transducer  32.76 
 
 
547 aa  171  4e-41  Geobacter bemidjiensis Bem  Bacteria  normal  0.114501  n/a   
 
 
-
 
NC_008609  Ppro_1391  methyl-accepting chemotaxis sensory transducer  28.47 
 
 
557 aa  170  5e-41  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3173  methyl-accepting chemotaxis sensory transducer  30.32 
 
 
541 aa  171  5e-41  Shewanella sp. ANA-3  Bacteria  normal  0.0131988  normal 
 
 
-
 
NC_008740  Maqu_3269  methyl-accepting chemotaxis sensory transducer  33.25 
 
 
605 aa  170  7e-41  Marinobacter aquaeolei VT8  Bacteria  hitchhiker  0.000515244  n/a   
 
 
-
 
NC_007005  Psyr_5092  histidine kinase, HAMP region: chemotaxis sensory transducer  38.11 
 
 
640 aa  170  7e-41  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2521  methyl-accepting chemotaxis sensory transducer  35.42 
 
 
533 aa  170  7e-41  Shewanella sp. ANA-3  Bacteria  normal  hitchhiker  0.000172201 
 
 
-
 
NC_004578  PSPTO_5553  methyl-accepting chemotaxis protein  37.82 
 
 
640 aa  169  9e-41  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00119  methyl-accepting chemotaxis protein  32 
 
 
626 aa  169  1e-40  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  27.35 
 
 
552 aa  169  1e-40  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_008577  Shewana3_3924  methyl-accepting chemotaxis sensory transducer  32.1 
 
 
527 aa  169  1e-40  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_2091  methyl-accepting chemotaxis sensory transducer  28.6 
 
 
541 aa  169  1e-40  Pseudomonas putida F1  Bacteria  normal  0.596764  normal 
 
 
-
 
NC_013889  TK90_1029  methyl-accepting chemotaxis sensory transducer  34.2 
 
 
411 aa  169  1e-40  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_2326  methyl-accepting chemotaxis sensory transducer  32.76 
 
 
547 aa  168  2e-40  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  37.3 
 
 
637 aa  168  2e-40  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_007492  Pfl01_4658  chemotaxis sensory transducer, Pas/Pac sensor  33.14 
 
 
529 aa  169  2e-40  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_007954  Sden_2955  chemotaxis sensory transducer  31.62 
 
 
497 aa  169  2e-40  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1491  histidine kinase, HAMP region: chemotaxis sensory transducer  35.21 
 
 
539 aa  168  2.9999999999999998e-40  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2424  methyl-accepting chemotaxis sensory transducer  29.17 
 
 
581 aa  168  2.9999999999999998e-40  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3044  methyl-accepting chemotaxis sensory transducer  34.24 
 
 
688 aa  167  5e-40  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  34.94 
 
 
558 aa  167  5e-40  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2301  methyl-accepting chemotaxis sensory transducer  31.09 
 
 
632 aa  167  5e-40  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012918  GM21_3709  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.73 
 
 
546 aa  167  5e-40  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011312  VSAL_I2130  methyl-accepting chemotaxis protein  35.59 
 
 
546 aa  167  5.9999999999999996e-40  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.665531  n/a   
 
 
-
 
NC_009092  Shew_0237  methyl-accepting chemotaxis sensory transducer  33.91 
 
 
632 aa  167  6.9999999999999995e-40  Shewanella loihica PV-4  Bacteria  normal  normal  0.997473 
 
 
-
 
NC_007517  Gmet_2828  methyl-accepting chemotaxis sensory transducer  27.89 
 
 
550 aa  167  6.9999999999999995e-40  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.000014913 
 
 
-
 
NC_004578  PSPTO_4624  methyl-accepting chemotaxis protein  34.93 
 
 
539 aa  166  8e-40  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.140064  n/a   
 
 
-
 
NC_009831  Ssed_0961  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
675 aa  166  8e-40  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_2789  methyl-accepting chemotaxis sensory transducer  35.35 
 
 
545 aa  166  9e-40  Marinobacter aquaeolei VT8  Bacteria  normal  0.888266  n/a   
 
 
-
 
NC_011146  Gbem_3600  methyl-accepting chemotaxis sensory transducer  34.08 
 
 
546 aa  166  1.0000000000000001e-39  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0808  methyl-accepting chemotaxis sensory transducer  32.3 
 
 
541 aa  166  1.0000000000000001e-39  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_3147  methyl-accepting chemotaxis sensory transducer  32 
 
 
540 aa  165  2.0000000000000002e-39  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0302394  n/a   
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  33.71 
 
 
547 aa  165  2.0000000000000002e-39  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_008700  Sama_2607  putative methyl-accepting chemotaxis sensory transducer  31.4 
 
 
541 aa  165  2.0000000000000002e-39  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.00122932  normal 
 
 
-
 
NC_007954  Sden_1091  chemotaxis sensory transducer  31.55 
 
 
620 aa  165  2.0000000000000002e-39  Shewanella denitrificans OS217  Bacteria  normal  0.0174472  n/a   
 
 
-
 
NC_009901  Spea_3491  methyl-accepting chemotaxis sensory transducer with Cache sensor  34.94 
 
 
626 aa  165  2.0000000000000002e-39  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2526  methyl-accepting chemotaxis protein  36.42 
 
 
559 aa  164  3e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.591236  n/a   
 
 
-
 
NC_007005  Psyr_0868  histidine kinase, HAMP region: chemotaxis sensory transducer  35.07 
 
 
546 aa  164  3e-39  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.872643 
 
 
-
 
NC_009901  Spea_2242  methyl-accepting chemotaxis sensory transducer  34.25 
 
 
664 aa  164  3e-39  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2263  methyl-accepting chemotaxis sensory transducer  29.37 
 
 
541 aa  164  3e-39  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010506  Swoo_3725  methyl-accepting chemotaxis sensory transducer  34.2 
 
 
620 aa  164  4.0000000000000004e-39  Shewanella woodyi ATCC 51908  Bacteria  normal  0.403145  normal 
 
 
-
 
NC_003910  CPS_4528  methyl-accepting chemotaxis protein  33.5 
 
 
672 aa  164  4.0000000000000004e-39  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_0563  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
633 aa  164  4.0000000000000004e-39  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0539  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
633 aa  164  4.0000000000000004e-39  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_3728  methyl-accepting chemotaxis sensory transducer  32.73 
 
 
527 aa  164  4.0000000000000004e-39  Shewanella sp. MR-4  Bacteria  normal  normal  0.436185 
 
 
-
 
NC_011663  Sbal223_0567  methyl-accepting chemotaxis sensory transducer  35.8 
 
 
633 aa  164  4.0000000000000004e-39  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_5569  methyl-accepting chemotaxis protein  28.17 
 
 
541 aa  164  5.0000000000000005e-39  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0728  chemotaxis sensory transducer  35.75 
 
 
639 aa  164  5.0000000000000005e-39  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>