| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1600 |
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| Symbol | |
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| ID | 4018075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 1861068 |
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| End bp | 1862684 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637955610 |
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| Product | chemotaxis sensory transducer |
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| Protein accession | YP_562607 |
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| Protein GI | 91792956 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00759873 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTAA CCAGTTTAAA AATAAAGCAT AGAATTGCTT TACTCACTCT TGTTGCTATC
ACTTCGTTCG TTATATCACT TTTTATTAAC AAACAAAGTG TGCAACAAAA TGCTGAACGC
TTAAATGGAC TTCAAACTCA ACTCTATCCA GTATTAGAAT TGGCCACTCA AAACGAGGGC
TTGCTATTAC AACTGGATCA ACATATTCAA ACGGCAGTCA CCACAGGCGA AGAAGATTCC
TTGGATACCG TAGATGCCAT AGTGATTAAT ATCAACAGCA ACCTTAACAA AGTCGTTGAA
TTGACCCCTG AGCATAGTCA AGAAATCGTT CAAATTAAAT CGCAATTATC AATTTATCAT
CAGAATGCAA AAATTTTAGT GGCGGAATTT TTAAAAGATG ATGTCGATTT TGATAAAGTG
AAGCGCCAAG CGGCAGATAA TGCCGAACGT TATAATCAGT TAGTGATTAA ATTTAAGCAG
AAAAAACAAT TATTTTCTGA ACAATTTAAA GCCAGCATTG AAAATACCTT AGCCAATTCA
GAAAGTGCAG GAACATCTAT GTTAATCATA GGGTTAACAG CATCACTGAT ACTGATCGTG
GCGGGTTTAC TGGTCAATTC CTCTATCATT TTAACCTTAA ATAATGTCAC TGATTCACTG
CGTAACATCT CTGAAGGTGA AGGCGATCTT CGCGCTAGGA TCCATTACGA AGGTAAAGAT
GAAATTGCCG TACTAGTGCA TTGGTTCAAT CAATTCGTGT CTAAGTTACA AGCCTCGATT
GCCGAGACCA AGTCCACCAC TGAGAGCTTA AGCCTAGTCT CCAAGTCACT CTTAAGTAGC
AGCAATAACA GTGAGCAGAC TGTGGCGGAA CAAAATGCGG CCATAGAACA AATCTCACAT
GCCATGCGTG AGATGTTTAT CAGTGTTGGC CACGTGGCAG AATTTGCCGC CAATGGTGCA
GCAGAAGCTG AACAAGCCAA TAACGATGCC AAGGCTGGCC AAGCCATTGT TGCTTCCGCA
GTCAATACCA TTGAGAAGTT ATCTCAGGAA GTGAAAACCA CAGCGGTCGT TGTCAATCAG
CTGGATGCCT TTACCAGTAA TGTTAACGAT ATTCTCGATA CCATTCGCGG CATTGCCGAC
CAAACCAACC TGTTGGCATT AAATGCGGCC ATTGAAGCGG CTCGTGCCGG TGAACAAGGT
CGAGGCTTTG CGGTCGTCGC CGATGAAGTG CGTACGCTCG CATCCCGCAC CCAAGCCTCG
ACTCAGGAAA TTCAACAAGT GTTGCAAGAG TTGCGCTCAA CCTCTAAAGA AGCAGTTGAA
GCCATGCAAC GGGGCATAAT TACGGCAAAT GACGGGGTAA AATCGACCGC TTTAGCCGGG
GATGCCCTCA CAGGGATCAC CTTGAAGGTC AGTGCTATTA ATCAAGTCAA TGAACAAATT
GCCGCAGCCA CAGAGGAGCA ACACAACACC TCTGAGCTCA TTCAACAATA CATTGCCGAG
ATTGAGAGTA ATGCCCATAA AGTGAAGAAT ACCACCCAGG AAATGGGCGG AATTAGCTTT
GACATTCAAA ATATTAGTAA ACGTCTACAA TTAATCACAG ATCAATTTAA AGTTTAG
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| Protein sequence | MKLTSLKIKH RIALLTLVAI TSFVISLFIN KQSVQQNAER LNGLQTQLYP VLELATQNEG
LLLQLDQHIQ TAVTTGEEDS LDTVDAIVIN INSNLNKVVE LTPEHSQEIV QIKSQLSIYH
QNAKILVAEF LKDDVDFDKV KRQAADNAER YNQLVIKFKQ KKQLFSEQFK ASIENTLANS
ESAGTSMLII GLTASLILIV AGLLVNSSII LTLNNVTDSL RNISEGEGDL RARIHYEGKD
EIAVLVHWFN QFVSKLQASI AETKSTTESL SLVSKSLLSS SNNSEQTVAE QNAAIEQISH
AMREMFISVG HVAEFAANGA AEAEQANNDA KAGQAIVASA VNTIEKLSQE VKTTAVVVNQ
LDAFTSNVND ILDTIRGIAD QTNLLALNAA IEAARAGEQG RGFAVVADEV RTLASRTQAS
TQEIQQVLQE LRSTSKEAVE AMQRGIITAN DGVKSTALAG DALTGITLKV SAINQVNEQI
AAATEEQHNT SELIQQYIAE IESNAHKVKN TTQEMGGISF DIQNISKRLQ LITDQFKV
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