Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_0972 |
Symbol | |
ID | 5370778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1159965 |
End bp | 1161287 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640829166 |
Product | methyl-accepting chemotaxis sensory transducer |
Protein accession | YP_001365188 |
Protein GI | 152999507 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0840] Methyl-accepting chemotaxis protein |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.803806 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCATAT TTAACAAAAA ATTAAAGGCT GAACATGAAC AATTGAAAGA AGAGTTATTT TCAATGCGGC AAGTTAGGGA AAGCCTTGAT AGTGAGATGT TAGTATTAGC GCTAGATGCT GATGGAAAAA TTATCGCAAT CAACGCTAAT TTTACTGACG ACATGTTATT TCAAAAAAAC TCACCTATCG GCAAACACTT AACGGAAATG GTGCCAGCGC GAGCTCGAAA CACAAGTCAT TATAAAGCAA TGTGCAATGC CATAAAGCAA TGCGAACATT GGGTAGGTGC ACTACAAATT GTTAAGGGCG ATGGTGAGGA AGCTTGGTTA CGAGCCATTT TACAGCCCGT CAAAAACAGT AATGGCAAGT TAAAACACTT TTCTATTTAT GCAAACGATC TAACCCGTAC TATTGAAAGC TCGAAAAAAC ATGAAGATTT AAACCAAGCA TTACAGCGCT CTACCGCTGT TATTGAGTTT AACTTAGACG GTACAGTCAT TACTGCTAAC GATAACTTTT TAAATGCGAT GGGATACACT AAGAATCAAA TTGTTGGTAA ACACCATAGA ATTTTTTGCG AACCAGAAGA ATATAACTCA ATAGAATACA AGCATTTTTG GGATCAGCTA TGCAAGGGAC AATTTGTCGC GAATCGCTTT AAACGTGTGG ATAGCTATGG CCGTATCGTT TGGTTAGAAG CCTCTTATAA TCCTATTTTT GATAGCTACA ACGAACTCTA CAAAGTCGTA AAATTTGCCA CTGTTATCAC AGATCAAGTC AACAGAGAAC TGGCAGTATC CGAAGCGGCT GACATAGCCT ATAGCACATC CCAACAAACC GATGCTTTTG CAAAAAAAGG GAGCTTAGTG CTACAAGAAA CAGTTGTGAT GATGAATAAA TTAGCGACGC AAATGAATGA TGCAGCCAAA GGCATTGAAG CATTAGATAA GCAATCTCAA ATGATTGGTG AGCTAGTAAA AAGTATCAGT GGCATCGCCG ATCAAACCAA TCTTCTTGCC TTAAATGCAG CAATTGAAGC CGCTCGCGCA GGCGAACAAG GACGCGGTTT TGCAGTCGTT GCAGATGAAG TCAGACAACT TGCCTCACGT ACCAGTAAAG CGACAGAGGA AATTGTAGAG GTAGTATCAA AAAATAAAAT GTTAACCGAA AGTGCAGTCA ATATGATTGA GCAAGGTAAG CAACAAGCGC AACAGGGGTT AACACTCTCA ACCCAATCGG GTGAGGTTAT GTCAGAGATT CAAGATGGTG CACAAAAAGT GGTTAATGCC GTTGGCCAAT TCACCAACCA GCTAACTGTC TAA
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Protein sequence | MIIFNKKLKA EHEQLKEELF SMRQVRESLD SEMLVLALDA DGKIIAINAN FTDDMLFQKN SPIGKHLTEM VPARARNTSH YKAMCNAIKQ CEHWVGALQI VKGDGEEAWL RAILQPVKNS NGKLKHFSIY ANDLTRTIES SKKHEDLNQA LQRSTAVIEF NLDGTVITAN DNFLNAMGYT KNQIVGKHHR IFCEPEEYNS IEYKHFWDQL CKGQFVANRF KRVDSYGRIV WLEASYNPIF DSYNELYKVV KFATVITDQV NRELAVSEAA DIAYSTSQQT DAFAKKGSLV LQETVVMMNK LATQMNDAAK GIEALDKQSQ MIGELVKSIS GIADQTNLLA LNAAIEAARA GEQGRGFAVV ADEVRQLASR TSKATEEIVE VVSKNKMLTE SAVNMIEQGK QQAQQGLTLS TQSGEVMSEI QDGAQKVVNA VGQFTNQLTV
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