Gene Shew185_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_0972 
Symbol 
ID5370778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1159965 
End bp1161287 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content40% 
IMG OID640829166 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001365188 
Protein GI152999507 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.803806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCATAT TTAACAAAAA ATTAAAGGCT GAACATGAAC AATTGAAAGA AGAGTTATTT 
TCAATGCGGC AAGTTAGGGA AAGCCTTGAT AGTGAGATGT TAGTATTAGC GCTAGATGCT
GATGGAAAAA TTATCGCAAT CAACGCTAAT TTTACTGACG ACATGTTATT TCAAAAAAAC
TCACCTATCG GCAAACACTT AACGGAAATG GTGCCAGCGC GAGCTCGAAA CACAAGTCAT
TATAAAGCAA TGTGCAATGC CATAAAGCAA TGCGAACATT GGGTAGGTGC ACTACAAATT
GTTAAGGGCG ATGGTGAGGA AGCTTGGTTA CGAGCCATTT TACAGCCCGT CAAAAACAGT
AATGGCAAGT TAAAACACTT TTCTATTTAT GCAAACGATC TAACCCGTAC TATTGAAAGC
TCGAAAAAAC ATGAAGATTT AAACCAAGCA TTACAGCGCT CTACCGCTGT TATTGAGTTT
AACTTAGACG GTACAGTCAT TACTGCTAAC GATAACTTTT TAAATGCGAT GGGATACACT
AAGAATCAAA TTGTTGGTAA ACACCATAGA ATTTTTTGCG AACCAGAAGA ATATAACTCA
ATAGAATACA AGCATTTTTG GGATCAGCTA TGCAAGGGAC AATTTGTCGC GAATCGCTTT
AAACGTGTGG ATAGCTATGG CCGTATCGTT TGGTTAGAAG CCTCTTATAA TCCTATTTTT
GATAGCTACA ACGAACTCTA CAAAGTCGTA AAATTTGCCA CTGTTATCAC AGATCAAGTC
AACAGAGAAC TGGCAGTATC CGAAGCGGCT GACATAGCCT ATAGCACATC CCAACAAACC
GATGCTTTTG CAAAAAAAGG GAGCTTAGTG CTACAAGAAA CAGTTGTGAT GATGAATAAA
TTAGCGACGC AAATGAATGA TGCAGCCAAA GGCATTGAAG CATTAGATAA GCAATCTCAA
ATGATTGGTG AGCTAGTAAA AAGTATCAGT GGCATCGCCG ATCAAACCAA TCTTCTTGCC
TTAAATGCAG CAATTGAAGC CGCTCGCGCA GGCGAACAAG GACGCGGTTT TGCAGTCGTT
GCAGATGAAG TCAGACAACT TGCCTCACGT ACCAGTAAAG CGACAGAGGA AATTGTAGAG
GTAGTATCAA AAAATAAAAT GTTAACCGAA AGTGCAGTCA ATATGATTGA GCAAGGTAAG
CAACAAGCGC AACAGGGGTT AACACTCTCA ACCCAATCGG GTGAGGTTAT GTCAGAGATT
CAAGATGGTG CACAAAAAGT GGTTAATGCC GTTGGCCAAT TCACCAACCA GCTAACTGTC
TAA
 
Protein sequence
MIIFNKKLKA EHEQLKEELF SMRQVRESLD SEMLVLALDA DGKIIAINAN FTDDMLFQKN 
SPIGKHLTEM VPARARNTSH YKAMCNAIKQ CEHWVGALQI VKGDGEEAWL RAILQPVKNS
NGKLKHFSIY ANDLTRTIES SKKHEDLNQA LQRSTAVIEF NLDGTVITAN DNFLNAMGYT
KNQIVGKHHR IFCEPEEYNS IEYKHFWDQL CKGQFVANRF KRVDSYGRIV WLEASYNPIF
DSYNELYKVV KFATVITDQV NRELAVSEAA DIAYSTSQQT DAFAKKGSLV LQETVVMMNK
LATQMNDAAK GIEALDKQSQ MIGELVKSIS GIADQTNLLA LNAAIEAARA GEQGRGFAVV
ADEVRQLASR TSKATEEIVE VVSKNKMLTE SAVNMIEQGK QQAQQGLTLS TQSGEVMSEI
QDGAQKVVNA VGQFTNQLTV