| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3753 |
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| Symbol | |
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| ID | 1185421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4242087 |
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| End bp | 4243355 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637395103 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | NP_793527 |
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| Protein GI | 28870908 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.642958 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTAATC GTCGTATCAA GAATGCCTTG CTTGCCTGCG AGGAAGAGTT GATTGCATTG
CAAGTCATGT GCGCCCGCCT CGAATCGGTT TTTCTGTCAG TACATATCAA TCAGGCCGGC
CGGATCATTT CTGCCAACCA CCGGTTTGCC CAGACGCTCG GTTACTTGTT GGATGAACTG
CCGGGCGTAG AGATCGGCGA CATCCTTGCT GAACCACACG GCGTATTTTC GCCAAGCCTG
ATGGCCGATG AGCAGATGCG CTACACCGCC GCTGATGGCC GGATTGTAAC GCTCAGTACC
TGTTGGATAG CTTTGTCGGA CTGCACATTC CAGTGCTATG GCTGTCTCGC GCCGATTCTG
ACGAGGGATG AGCAGGAAAG CATTGAACTG TTATGCGCAC TGAACCGCTC GACAGCGATC
GTACAGTTCA GCCTCGACGG TACAGTTCTG TATGCCAACA AGCCATTTAT CGAGACCATG
GGGTACAGCC TCGCGGAAAT CGAGGGCAAG CACCACCGAT TGTTTTGCCT GGACGAGGAC
GCGGCCTCTG CGGAATATGC CAAGTTCTGG AAATCGTTGA GTGAGGGAGT GTTCGTCGCA
GGGCGATTTC GTCGTCTGGA TAAACGCGGC CGGGTGGTGT GGTTGGAGGC TACCTACAAT
CCCATAAAAG ATGCTTCAGG CCAGGTTTAT AAAGTCGCAA AGTTCGCCAG TGTCGTGACC
GGGCAGGTGG AGAAAGCTGA TAGGGTCAAA CAGGCAGCAG ATATGGCTTA CGAGGTCTCA
CTTGATACCG ATGTGAAAGC GCATCGAGGT ATGGACCTAG TGGGTGACTC AGTCATCGCC
GTGCAAACGA TTTCGCAACA GATGGCCTCG GTAACCGACA GCATGACGGC ACTTAAATCT
CAGGCGCTAT TGATCGGGTC CATTGTCGAT ACTATTGGCT CGATTGCTGC TCAAACAAAT
CTTCTCGCGC TCAATGCTGC CATCGAAGCG GCGCGAGCGG GCGAACACGG GCGTGGTTTT
GCGGTCGTTG CGGATGAGGT GCGTAAACTT GCTGGCCGCA CCAGCACCGC CACGAAAGAG
ATCACCGGCG TGGTACGAGA GAATCGCGGG TTGGCTGATC AAGCAGCAAC CCAGGTTCAG
TGCAGTCGAG ATCAGGCTGA TCGGTTGCTG GGGCTGGCGG AGCAGGCAGG TACGGCGATG
GCGGATATTC AGCAGGGGGC CAGGCAGGTT GTGGGGGCCA TTGGTAAAGT CACCAGCGAC
CTGGATTGA
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| Protein sequence | MFNRRIKNAL LACEEELIAL QVMCARLESV FLSVHINQAG RIISANHRFA QTLGYLLDEL
PGVEIGDILA EPHGVFSPSL MADEQMRYTA ADGRIVTLST CWIALSDCTF QCYGCLAPIL
TRDEQESIEL LCALNRSTAI VQFSLDGTVL YANKPFIETM GYSLAEIEGK HHRLFCLDED
AASAEYAKFW KSLSEGVFVA GRFRRLDKRG RVVWLEATYN PIKDASGQVY KVAKFASVVT
GQVEKADRVK QAADMAYEVS LDTDVKAHRG MDLVGDSVIA VQTISQQMAS VTDSMTALKS
QALLIGSIVD TIGSIAAQTN LLALNAAIEA ARAGEHGRGF AVVADEVRKL AGRTSTATKE
ITGVVRENRG LADQAATQVQ CSRDQADRLL GLAEQAGTAM ADIQQGARQV VGAIGKVTSD
LD
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