More than 300 homologs were found in PanDaTox collection
for query gene Sden_1600 on replicon NC_007954
Organism: Shewanella denitrificans OS217



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007954  Sden_1600  chemotaxis sensory transducer  100 
 
 
538 aa  1066    Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00759873  n/a   
 
 
-
 
NC_008345  Sfri_2331  methyl-accepting chemotaxis sensory transducer  66.36 
 
 
538 aa  682    Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.797541  n/a   
 
 
-
 
NC_011138  MADE_01731  Methyl-accepting chemotaxis protein  33.7 
 
 
539 aa  289  8e-77  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_0143  methyl-accepting chemotaxis sensory transducer  35.42 
 
 
539 aa  266  1e-69  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008740  Maqu_3644  methyl-accepting chemotaxis sensory transducer  42.51 
 
 
378 aa  251  3e-65  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0343  methyl-accepting chemotaxis sensory transducer  32.6 
 
 
547 aa  246  6e-64  Saccharophagus degradans 2-40  Bacteria  normal  0.0441023  normal  0.46066 
 
 
-
 
NC_003910  CPS_3864  methyl-accepting chemotaxis protein  41.14 
 
 
568 aa  238  2e-61  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  40.28 
 
 
636 aa  229  9e-59  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009784  VIBHAR_05150  adenylyl cyclase class-3/4/guanylyl cyclase  37.56 
 
 
650 aa  229  1e-58  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_4404  methyl-accepting chemotaxis sensory transducer  39.89 
 
 
638 aa  226  6e-58  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0156105 
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  39.11 
 
 
639 aa  226  8e-58  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  40.35 
 
 
638 aa  223  6e-57  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  36.32 
 
 
638 aa  222  9.999999999999999e-57  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4795  methyl-accepting chemotaxis sensory transducer  38.87 
 
 
638 aa  221  1.9999999999999999e-56  Shewanella woodyi ATCC 51908  Bacteria  normal  0.884167  hitchhiker  0.000462611 
 
 
-
 
NC_007954  Sden_3010  chemotaxis sensory transducer  30.06 
 
 
539 aa  220  3.9999999999999997e-56  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009438  Sputcn32_0619  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
634 aa  219  1e-55  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_3611  methyl-accepting chemotaxis sensory transducer  40.06 
 
 
634 aa  218  2.9999999999999998e-55  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1963  putative methyl-accepting chemotaxis sensory transducer  40.3 
 
 
637 aa  216  7e-55  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.870205  n/a   
 
 
-
 
NC_004347  SO_4053  methyl-accepting chemotaxis protein  40.85 
 
 
634 aa  216  9.999999999999999e-55  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008345  Sfri_1939  methyl-accepting chemotaxis sensory transducer  39.15 
 
 
638 aa  216  9.999999999999999e-55  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.573171  n/a   
 
 
-
 
NC_013889  TK90_0949  methyl-accepting chemotaxis sensory transducer  41.69 
 
 
636 aa  215  1.9999999999999998e-54  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.0451727 
 
 
-
 
NC_009438  Sputcn32_0925  methyl-accepting chemotaxis sensory transducer  35.67 
 
 
543 aa  214  3.9999999999999995e-54  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_4454  methyl-accepting chemotaxis protein  40.85 
 
 
642 aa  214  4.9999999999999996e-54  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_3750  methyl-accepting chemotaxis sensory transducer  40.39 
 
 
638 aa  213  9e-54  Shewanella sp. MR-7  Bacteria  normal  0.666265  normal  0.186245 
 
 
-
 
NC_008577  Shewana3_0272  methyl-accepting chemotaxis sensory transducer  40.39 
 
 
638 aa  213  9e-54  Shewanella sp. ANA-3  Bacteria  decreased coverage  0.00090491  hitchhiker  0.000000349734 
 
 
-
 
NC_009052  Sbal_0282  methyl-accepting chemotaxis sensory transducer  41.23 
 
 
641 aa  213  1e-53  Shewanella baltica OS155  Bacteria  normal  0.0149105  n/a   
 
 
-
 
NC_011663  Sbal223_0279  methyl-accepting chemotaxis sensory transducer  41.23 
 
 
638 aa  213  1e-53  Shewanella baltica OS223  Bacteria  normal  0.983838  normal 
 
 
-
 
NC_009997  Sbal195_0283  methyl-accepting chemotaxis sensory transducer  41.23 
 
 
638 aa  213  1e-53  Shewanella baltica OS195  Bacteria  normal  0.411591  normal 
 
 
-
 
NC_009665  Shew185_0275  methyl-accepting chemotaxis sensory transducer  41.23 
 
 
638 aa  213  1e-53  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_2316  putative methyl-accepting chemotaxis sensory transducer  38.16 
 
 
548 aa  212  2e-53  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0208981 
 
 
-
 
NC_009438  Sputcn32_0387  methyl-accepting chemotaxis sensory transducer  38.52 
 
 
638 aa  211  3e-53  Shewanella putrefaciens CN-32  Bacteria  normal  0.408395  n/a   
 
 
-
 
NC_009456  VC0395_1102  methyl-accepting chemotaxis protein  37.47 
 
 
638 aa  210  4e-53  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3077  methyl-accepting chemotaxis sensory transducer  28.55 
 
 
539 aa  210  4e-53  Shewanella baltica OS185  Bacteria  normal  0.417897  n/a   
 
 
-
 
NC_008321  Shewmr4_0271  methyl-accepting chemotaxis sensory transducer  40.11 
 
 
638 aa  211  4e-53  Shewanella sp. MR-4  Bacteria  normal  0.758035  hitchhiker  0.0000678809 
 
 
-
 
NC_009439  Pmen_2650  methyl-accepting chemotaxis sensory transducer  36.93 
 
 
568 aa  210  4e-53  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_3522  putative methyl-accepting chemotaxis sensory transducer  40.44 
 
 
636 aa  209  8e-53  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3067  methyl-accepting chemotaxis sensory transducer  28.55 
 
 
539 aa  209  8e-53  Shewanella baltica OS155  Bacteria  normal  0.0971462  n/a   
 
 
-
 
NC_011901  Tgr7_0851  methyl-accepting chemotaxis sensory transducer  35.38 
 
 
674 aa  209  1e-52  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.244273  n/a   
 
 
-
 
NC_009997  Sbal195_3220  methyl-accepting chemotaxis sensory transducer  28.55 
 
 
539 aa  208  2e-52  Shewanella baltica OS195  Bacteria  normal  0.0243326  normal 
 
 
-
 
NC_008321  Shewmr4_0924  methyl-accepting chemotaxis sensory transducer  38.36 
 
 
543 aa  207  3e-52  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_61300  putative chemotaxis transducer  39.15 
 
 
712 aa  207  5e-52  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.862971 
 
 
-
 
NC_009656  PSPA7_5279  putative chemotaxis transducer  39.15 
 
 
712 aa  206  6e-52  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0493383  n/a   
 
 
-
 
NC_008577  Shewana3_0923  methyl-accepting chemotaxis sensory transducer  35.71 
 
 
543 aa  206  6e-52  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_0959  methyl-accepting chemotaxis sensory transducer  38.36 
 
 
543 aa  206  8e-52  Shewanella sp. MR-7  Bacteria  normal  0.656726  normal  0.666936 
 
 
-
 
NC_004578  PSPTO_1061  methyl-accepting chemotaxis protein  38.72 
 
 
626 aa  204  3e-51  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.646209  n/a   
 
 
-
 
NC_009052  Sbal_0908  methyl-accepting chemotaxis sensory transducer  38.36 
 
 
543 aa  204  3e-51  Shewanella baltica OS155  Bacteria  normal  0.073872  n/a   
 
 
-
 
NC_011663  Sbal223_3382  methyl-accepting chemotaxis sensory transducer  38.36 
 
 
543 aa  204  4e-51  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_0906  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  38.72 
 
 
626 aa  204  4e-51  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3455  methyl-accepting chemotaxis sensory transducer  38.36 
 
 
543 aa  204  5e-51  Shewanella baltica OS185  Bacteria  normal  0.0121993  n/a   
 
 
-
 
NC_007492  Pfl01_4715  chemotaxis sensory transducer  39.19 
 
 
713 aa  203  7e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.233277  normal  0.171171 
 
 
-
 
NC_011901  Tgr7_1425  methyl-accepting chemotaxis sensory transducer  42.32 
 
 
438 aa  202  9.999999999999999e-51  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_0081  putative methyl-accepting chemotaxis sensory transducer  40.51 
 
 
544 aa  202  1.9999999999999998e-50  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0339  methyl-accepting chemotaxis sensory transducer  37.39 
 
 
558 aa  201  3e-50  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_5093  histidine kinase, HAMP region: chemotaxis sensory transducer  39.08 
 
 
676 aa  201  3e-50  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_1929  methyl-accepting chemotaxis sensory transducer  36.52 
 
 
662 aa  201  3.9999999999999996e-50  Shewanella loihica PV-4  Bacteria  normal  0.23754  normal  0.0188929 
 
 
-
 
NC_008700  Sama_0622  putative methyl-accepting chemotaxis sensory transducer  29.17 
 
 
539 aa  200  6e-50  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.321986 
 
 
-
 
NC_009783  VIBHAR_01753  hypothetical protein  37.74 
 
 
545 aa  200  6e-50  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011901  Tgr7_2492  methyl-accepting chemotaxis sensory transducer  30.09 
 
 
572 aa  199  7.999999999999999e-50  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0657  chemotaxis sensory transducer, Cache sensor  34.18 
 
 
648 aa  199  1.0000000000000001e-49  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.511779  normal 
 
 
-
 
NC_009831  Ssed_3256  methyl-accepting chemotaxis protein  35.34 
 
 
558 aa  199  1.0000000000000001e-49  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_3579  methyl-accepting chemotaxis sensory transducer  38.08 
 
 
543 aa  199  1.0000000000000001e-49  Shewanella baltica OS195  Bacteria  normal  normal  0.0986947 
 
 
-
 
NC_002947  PP_0584  methyl-accepting chemotaxis transducer  36.1 
 
 
647 aa  197  3e-49  Pseudomonas putida KT2440  Bacteria  normal  0.77697  normal  0.644217 
 
 
-
 
NC_013456  VEA_003896  methyl-accepting chemotaxis protein  34.3 
 
 
545 aa  197  4.0000000000000005e-49  Vibrio sp. Ex25  Bacteria  decreased coverage  0.000288698  n/a   
 
 
-
 
NC_010501  PputW619_4580  methyl-accepting chemotaxis sensory transducer  36.49 
 
 
648 aa  197  4.0000000000000005e-49  Pseudomonas putida W619  Bacteria  normal  normal  0.0108713 
 
 
-
 
NC_009512  Pput_0623  methyl-accepting chemotaxis sensory transducer  36.1 
 
 
647 aa  197  5.000000000000001e-49  Pseudomonas putida F1  Bacteria  normal  0.494937  normal 
 
 
-
 
NC_004578  PSPTO_3379  methyl-accepting chemotaxis protein  35.69 
 
 
559 aa  196  7e-49  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_4196  methyl-accepting chemotaxis sensory transducer  39.71 
 
 
552 aa  196  8.000000000000001e-49  Shewanella pealeana ATCC 700345  Bacteria  normal  0.14959  n/a   
 
 
-
 
NC_009831  Ssed_4463  methyl-accepting chemotaxis sensory transducer  39.48 
 
 
552 aa  196  9e-49  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.43301 
 
 
-
 
NC_008789  Hhal_0167  methyl-accepting chemotaxis sensory transducer  34.56 
 
 
540 aa  196  1e-48  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0629  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.39 
 
 
647 aa  195  1e-48  Pseudomonas putida GB-1  Bacteria  normal  0.624074  hitchhiker  0.000681907 
 
 
-
 
NC_009483  Gura_2845  methyl-accepting chemotaxis sensory transducer  35.81 
 
 
549 aa  195  2e-48  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000597879  n/a   
 
 
-
 
NC_002947  PP_1371  methyl-accepting chemotaxis transducer  36.86 
 
 
624 aa  195  2e-48  Pseudomonas putida KT2440  Bacteria  normal  normal  0.318672 
 
 
-
 
NC_010506  Swoo_0712  methyl-accepting chemotaxis sensory transducer with Cache sensor  37.96 
 
 
627 aa  195  2e-48  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0412159  hitchhiker  0.0000400753 
 
 
-
 
NC_009092  Shew_0808  methyl-accepting chemotaxis sensory transducer  37.09 
 
 
554 aa  195  2e-48  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008345  Sfri_0524  methyl-accepting chemotaxis sensory transducer  28.91 
 
 
539 aa  194  2e-48  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2719  methyl-accepting chemotaxis sensory transducer  32.41 
 
 
655 aa  194  3e-48  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_4352  methyl-accepting chemotaxis sensory transducer  36.86 
 
 
624 aa  194  3e-48  Pseudomonas putida F1  Bacteria  normal  normal  0.0132701 
 
 
-
 
NC_008700  Sama_1713  putative methyl-accepting chemotaxis sensory transducer  37.43 
 
 
666 aa  194  3e-48  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.000425798  normal  0.0665929 
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  33.98 
 
 
637 aa  194  4e-48  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_010322  PputGB1_1880  methyl-accepting chemotaxis sensory transducer with Cache sensor  38.3 
 
 
628 aa  194  5e-48  Pseudomonas putida GB-1  Bacteria  normal  0.454316  normal 
 
 
-
 
NC_011138  MADE_00464  methyl-accepting chemotaxis protein  34.97 
 
 
636 aa  194  5e-48  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_2814  methyl-accepting chemotaxis sensory transducer  32.08 
 
 
702 aa  193  5e-48  Shewanella woodyi ATCC 51908  Bacteria  normal  0.650804  normal 
 
 
-
 
NC_007492  Pfl01_0450  chemotaxis sensory transducer  36.86 
 
 
645 aa  193  6e-48  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_3489  methyl-accepting chemotaxis sensory transducer  35.91 
 
 
628 aa  193  6e-48  Pseudomonas putida F1  Bacteria  normal  0.228387  normal 
 
 
-
 
NC_009654  Mmwyl1_0219  methyl-accepting chemotaxis sensory transducer  38.04 
 
 
773 aa  193  8e-48  Marinomonas sp. MWYL1  Bacteria  normal  0.952357  normal 
 
 
-
 
NC_003910  CPS_4964  methyl-accepting chemotaxis protein  36.28 
 
 
545 aa  193  9e-48  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_3669  methyl-accepting chemotaxis sensory transducer  37.8 
 
 
716 aa  192  9e-48  Pseudomonas mendocina ymp  Bacteria  normal  0.170337  normal 
 
 
-
 
NC_002947  PP_2249  methyl-accepting chemotaxis transducer  35.91 
 
 
643 aa  192  1e-47  Pseudomonas putida KT2440  Bacteria  normal  0.477129  normal  0.786945 
 
 
-
 
NC_009439  Pmen_2000  methyl-accepting chemotaxis sensory transducer  35.47 
 
 
560 aa  192  1e-47  Pseudomonas mendocina ymp  Bacteria  normal  0.0144557  normal  0.0324669 
 
 
-
 
NC_009654  Mmwyl1_1383  methyl-accepting chemotaxis sensory transducer  36 
 
 
636 aa  192  1e-47  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00353653  normal  0.775857 
 
 
-
 
NC_008463  PA14_26280  putative chemotaxis transducer  36.67 
 
 
545 aa  192  1e-47  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.917899 
 
 
-
 
NC_009456  VC0395_1007  hemolysin secretion protein HylB  36.11 
 
 
548 aa  192  1e-47  Vibrio cholerae O395  Bacteria  normal  0.702356  n/a   
 
 
-
 
NC_008463  PA14_56010  chemotactic transducer PctB  34.55 
 
 
629 aa  192  1e-47  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_2823  methyl-accepting chemotaxis transducer  30.19 
 
 
550 aa  192  2e-47  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_1586  methyl-accepting chemotaxis sensory transducer  33.5 
 
 
626 aa  191  2e-47  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0767  putative methyl-accepting chemotaxis sensory transducer  40.32 
 
 
546 aa  191  2e-47  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_007005  Psyr_2220  histidine kinase, HAMP region:Cache: chemotaxis sensory transducer  34.84 
 
 
646 aa  192  2e-47  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.071358  normal  0.520396 
 
 
-
 
NC_008340  Mlg_1937  methyl-accepting chemotaxis sensory transducer  37.18 
 
 
541 aa  192  2e-47  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.158854  normal  0.960341 
 
 
-
 
NC_008463  PA14_55960  chemotactic transducer PctC  34.27 
 
 
632 aa  192  2e-47  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  0.289325  normal 
 
 
-
 
NC_004578  PSPTO_2448  methyl-accepting chemotaxis protein  34.96 
 
 
646 aa  191  2.9999999999999997e-47  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.718596  n/a   
 
 
-
 
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